Ggra5408.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5408.t1
Unique NameGgra5408.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length536
Homology
The following BLAST results are available for this feature:
BLAST of Ggra5408.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 439..503
e-value: 1.3E-5
score: 26.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 488..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 404..448
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 447..496

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000099_piloncontigtig00000099_pilon:284079..285686 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5408.t1Ggra5408.t1Gracilaria gracilis GNS1m malemRNAtig00000099_pilon 284079..285686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5408.t1 ID=Ggra5408.t1|Name=Ggra5408.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=536bp
MAVNQDRETKTNSWSWEQDCILRDALQEARCEGIEDYAQLSFWKRMESHK
LLPDGQSADECLARSQHLLQSEKPPHRSPQDKIVTKVSPSNNAPSHAVER
ASIISNMASESKVDPKGLVVNLLDNSADEKEVLRGNQEYRASKLELENQL
EFEAGGDLGYCARTLFSLSNIPEVGMVLNTTEVKENLYKRLRKVFGSPKS
VEVIVHLNENSACVHLDGIMGKIRTILSLNIITQCDLSDLLESSHTFFEQ
ESLSKALKNCGYSLLKILLDVVKVMVSQRPDRSGEVTELYRGCVSRFREW
GCLEFFAGRSGETIVSDQIKELKQFILNKHNGMLQTMVPAEKEIRGKLSE
LAGISCTTRKRCQRYFAQQTTSPQNPQRGQANENLSRATVMEVPDFFSDK
DEAGELDGKETYADRKTPLKSTREHPGARPDSVKLPTTKKGEEFARTGHY
SPKEDALIRDGIAKFGFGKWIPISKLFEKHGILRQPMSIKDRARSLGMSS
DKKRKRAPTAPRRQKPKKIRFFESDDSFEELHGFD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf