Ggra504.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra504.t1
Unique NameGgra504.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length303
Homology
BLAST of Ggra504.t1 vs. uniprot
Match: A0A2V3IQ21 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ21_9FLOR)

HSP 1 Score: 154 bits (388), Expect = 9.860e-42
Identity = 90/175 (51.43%), Postives = 110/175 (62.86%), Query Frame = 0
Query:   10 DGASGDVDALVSELAIMQRVELRLELPDCSVRSLTLALYGELTPSTTANFAALVAARAYDNKGVYRVLPQLNVQLGDTLRNGGVSGAAAPSDGRLRAKNWRLSHSAPGVLSMVVAHGYVDSRFFFTTRRGDSRYLDGRYVGFGRVQRKLDGLFEQERAVSGE-----QCSLRIAS 179
            D  +G VD   +E AI  RV + L+  +     LT+ALYG + P T  NF  L+     D K VYRV+  L +QLGD LRNGG SG AA   G L A+N+R+SHS PG+LSMVV  G VDSRFF TTR GDSRYLDGRYV FGRV+  +D L+E +R  +         S+RIAS
Sbjct:   68 DDKAGQVDVAENEPAITNRVFIDLQQANGRTGRLTIALYGTVVPDTVDNFLRLIDNGYRDTK-VYRVVNGLTIQLGDVLRNGGKSGRAATETGVLEAENYRISHSVPGILSMVVKDGMVDSRFFVTTRPGDSRYLDGRYVAFGRVESGMDTLYELDRIPNSNGFVRRPVSVRIAS 241          
BLAST of Ggra504.t1 vs. uniprot
Match: A0A7S0BM62 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BM62_9RHOD)

HSP 1 Score: 93.6 bits (231), Expect = 5.130e-18
Identity = 58/118 (49.15%), Postives = 73/118 (61.86%), Query Frame = 0
Query:  185 FSPGSFIHRGTVYTRSSLWGTSLGVVPAVPRSTPENVTKMLVDSWSVSPAAIDGPAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGICAKAHYHDILANID 302
            F PG+ ++ G + TR++  G S G +   P      V K+  + WSVS A +     Q FA+SL PYLAFL  + R E  CPPL   GF+FLLVFV ATIPAGI AK  Y+DILAN+D
Sbjct:   27 FVPGASVNTGGI-TRTAK-GVS-GSMIRRPNGRCSVVAKVFTNPWSVSSAELGS---QLFALSLFPYLAFLRSIGREETDCPPLAVRGFQFLLVFVAATIPAGIYAKVAYNDILANVD 138          
BLAST of Ggra504.t1 vs. uniprot
Match: A0A7S1GS18 (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GS18_HEMAN)

HSP 1 Score: 93.6 bits (231), Expect = 7.940e-18
Identity = 53/98 (54.08%), Postives = 63/98 (64.29%), Query Frame = 0
Query:  205 TSLGVVPAVPRSTPENVTKMLVDSWSVSPAAIDGPAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGICAKAHYHDILANID 302
            T + + P    +TPE      V +  +S   I+  AG  FAVSL PYL FLY L++ E   PPL NFGFRFLLVFVFA+IPA I AKA Y DILAN+D
Sbjct:   93 TRMQLDPGGLAATPEIAN---VAATYLSTLTIEDVAGGLFAVSLFPYLGFLYHLDKEETNTPPLGNFGFRFLLVFVFASIPAAIAAKALYGDILANVD 187          
BLAST of Ggra504.t1 vs. uniprot
Match: A0A7S0IAH7 (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IAH7_MICPS)

HSP 1 Score: 89.7 bits (221), Expect = 8.540e-18
Identity = 64/165 (38.79%), Postives = 81/165 (49.09%), Query Frame = 0
Query:  167 AVSGEQCSLRIASVSGSRFSPGSFIHRGT--VYTRSSLWGTSL---------------GVVPAVPRST----------PENVTKML--VDSWSVSPAAIDGPAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGICAKAHYHDILANID 302
            AV GEQ     A +  +R +P   + R T  V +R  + G S+               G +P  PR            PE VT  +  VD++ VS    +   G  F  SL+PYL FLY L   E+K PP   FGF+FLLVFVF TIP  I AK  Y+DILAN+D
Sbjct:    5 AVRGEQALAGAAMLPLARLAPARVVARPTLCVKSRRGVTGVSIADATGGTRPAICFPYGPIPVGPRVRFPIAPNRAVGPEAVTSAVTTVDAFGVSAEQWELIEGNLFGASLLPYLVFLYYLGMPESKMPPRALFGFKFLLVFVFGTIPCAIYAKLVYNDILANVD 169          
BLAST of Ggra504.t1 vs. uniprot
Match: A0A7R9TEG7 (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TEG7_MICPS)

HSP 1 Score: 87.8 bits (216), Expect = 3.950e-17
Identity = 44/78 (56.41%), Postives = 51/78 (65.38%), Query Frame = 0
Query:  225 LVDSWSVSPAAIDGPAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGICAKAHYHDILANID 302
            +VD + +SP A +   G  F  SL PYLAFLY L+R E   PP   FGF+FLLVFVF TIP  I AK  Y DILAN+D
Sbjct:   82 VVDPFGMSPEAWELLEGNLFGASLFPYLAFLYFLDRDECAIPPRAMFGFKFLLVFVFGTIPGAIYAKVAYDDILANVD 159          
BLAST of Ggra504.t1 vs. uniprot
Match: A0A7S0QUT8 (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QUT8_9CHLO)

HSP 1 Score: 90.1 bits (222), Expect = 1.610e-16
Identity = 47/75 (62.67%), Postives = 53/75 (70.67%), Query Frame = 0
Query:  228 SWSVSPAAIDGPAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGICAKAHYHDILANID 302
            +WSV+ AAI   A   F  SL+PYL FLY + R EAK PPL N GFRFLL FV ATIPAG+ AK  Y DILAN+D
Sbjct:   88 AWSVTGAAI---APTLFQASLLPYLGFLYFVGRPEAKTPPLANVGFRFLLCFVAATIPAGVIAKNQYGDILANVD 159          
BLAST of Ggra504.t1 vs. uniprot
Match: D8LER3 (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER3_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 2.220e-16
Identity = 44/77 (57.14%), Postives = 53/77 (68.83%), Query Frame = 0
Query:  226 VDSWSVSPAAIDGPAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGICAKAHYHDILANID 302
            V +WSV+    D  A + F  SL PYLAFL++L+R E K P    FGF FLLVFV ATIPAGI AK  Y++ILAN+D
Sbjct:   26 VSAWSVTSITSDF-AAELFQASLFPYLAFLWLLSRKETKTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVD 101          
BLAST of Ggra504.t1 vs. uniprot
Match: A0A0G4G427 (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G427_VITBC)

HSP 1 Score: 88.2 bits (217), Expect = 4.620e-16
Identity = 47/77 (61.04%), Postives = 55/77 (71.43%), Query Frame = 0
Query:  226 VDSWSVSPAAIDGPAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGICAKAHYHDILANID 302
            V+ WSVS   I   AGQ FA SL PYLAFL+ L+R E + P L NFGF+FLLVFV  TIPAGI AK  Y++ LAN+D
Sbjct:   10 VNPWSVSAEDI---AGQLFAASLFPYLAFLWFLSRPETRMPRLANFGFQFLLVFVGMTIPAGILAKVWYNEKLANVD 83          
BLAST of Ggra504.t1 vs. uniprot
Match: A0A0G4G622 (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G622_9ALVE)

HSP 1 Score: 87.8 bits (216), Expect = 9.500e-16
Identity = 46/77 (59.74%), Postives = 53/77 (68.83%), Query Frame = 0
Query:  226 VDSWSVSPAAIDGPAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGICAKAHYHDILANID 302
            VD WSV   A+     + F+ SL PYLAFL+ L R E K PPL  FGFRFLLVFVF+TIPAGI AK  Y + LAN+D
Sbjct:   72 VDPWSVDNEALTS---RLFSSSLAPYLAFLWFLGRPETKTPPLALFGFRFLLVFVFSTIPAGIYAKTQYGEKLANVD 145          
BLAST of Ggra504.t1 vs. uniprot
Match: A0A7S2WXW3 (Hypothetical protein (Fragment) n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2WXW3_9CHLO)

HSP 1 Score: 85.9 bits (211), Expect = 1.050e-15
Identity = 45/89 (50.56%), Postives = 56/89 (62.92%), Query Frame = 0
Query:  219 ENVTKMLVDSWSVS-----PAAIDGPAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGICAKAHYHDILANID 302
            + V   L D+WSV      P  ++G   Q F  SL+P L +L+ L+R EAK PPL N G R LL+FVFATIPAGI AK  + D LAN+D
Sbjct:   12 QEVVGQLSDAWSVGTANGLPPQLEGIETQLFQASLLPELLYLWFLSRPEAKTPPLANTGARMLLLFVFATIPAGIAAKVQFGDTLANVD 100          
The following BLAST results are available for this feature:
BLAST of Ggra504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQ219.860e-4251.43Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracil... [more]
A0A7S0BM625.130e-1849.15Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S1GS187.940e-1854.08Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S0IAH78.540e-1838.79Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7R9TEG73.950e-1756.41Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7S0QUT81.610e-1662.67Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
D8LER32.220e-1657.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4G4274.620e-1661.04Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A0G4G6229.500e-1659.74Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S2WXW31.050e-1550.56Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 47..62
score: 45.11
coord: 73..85
score: 33.33
coord: 146..161
score: 35.56
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 42..160
e-value: 2.4E-15
score: 57.1
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 30..161
score: 14.715278
IPR021995Protein of unknown function DUF3593PFAMPF12159DUF3593coord: 244..302
e-value: 5.3E-19
score: 68.0
IPR021995Protein of unknown function DUF3593PANTHERPTHR35473FAMILY NOT NAMEDcoord: 226..302
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 17..179
e-value: 7.0E-20
score: 73.4
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 35..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 295..302
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 271..294
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 260..270
NoneNo IPR availableTMHMMTMhelixcoord: 239..258
NoneNo IPR availableTMHMMTMhelixcoord: 271..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000238_piloncontigtig00000238_pilon:43696..44657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra504.t1Ggra504.t1Gracilaria gracilis GNS1m malemRNAtig00000238_pilon 43696..44657 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra504.t1 ID=Ggra504.t1|Name=Ggra504.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=303bp
MLVAQTADADGASGDVDALVSELAIMQRVELRLELPDCSVRSLTLALYGE
LTPSTTANFAALVAARAYDNKGVYRVLPQLNVQLGDTLRNGGVSGAAAPS
DGRLRAKNWRLSHSAPGVLSMVVAHGYVDSRFFFTTRRGDSRYLDGRYVG
FGRVQRKLDGLFEQERAVSGEQCSLRIASVSGSRFSPGSFIHRGTVYTRS
SLWGTSLGVVPAVPRSTPENVTKMLVDSWSVSPAAIDGPAGQSFAVSLIP
YLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGICAKAHYHDILAN
ID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR021995DUF3593
IPR029000Cyclophilin-like_dom_sf