Ggra4966.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra4966.t1 vs. uniprot
Match: A0A2V3IEF9 (30S ribosomal protein S18 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEF9_9FLOR) HSP 1 Score: 321 bits (823), Expect = 6.560e-107 Identity = 172/269 (63.94%), Postives = 209/269 (77.70%), Query Frame = 0
Query: 27 RALASSGDSSGP--NDTEVDSEKHPVDGFFDEENIADLSPLEVARMRVTYGLVKEHTDAIEKGLPGIDPDSNPLIDPRSFHIRTLPEFPPEVLKQFRKEIPPNVAAESRSVSTYNLWESIQSGETHELLEEHKETKDNEWTAVDERTMPAGQYSRLHRQSVTSRTGISMRTPATAAQPTPFTTKKMKKGDCPLKDERGRSRVDFRAVGTLKAFLSDNLKILPRKKSGLCAKSQRKLAKAVKTARTMALLDPEPIPRLTVEEMTEIERHL 293
RALA+ + G N+ + + DGFF EENI+DLSPLEVARMRVTYGL+KEH +AIEKGL +DP+SNPLIDPRSF R LP+ P EVL+QFRKE+PP VAAESR VSTYNLWE++QSGETHELLEE +D W+AVDERTM Y++L RQ+V G + + A +A +KM K +C LKD+RGRS VDFRAV ++KA+LSDNLKILPR+KSGLCAKSQRKLA+AVKTAR+MALL+PEPIP LTVEEM ++E++L
Sbjct: 28 RALATDNNEPGSELNERKERANADKSDGFFSEENISDLSPLEVARMRVTYGLLKEHVEAIEKGLEDVDPESNPLIDPRSFQTRKLPQIPKEVLEQFRKEVPPEVAAESRVVSTYNLWEALQSGETHELLEEQSTQED--WSAVDERTMDTRSYTKLQRQAVL---GQKVPSHAPSAAMNYMAKRKMNKSECALKDDRGRSVVDFRAVESMKAYLSDNLKILPRRKSGLCAKSQRKLARAVKTARSMALLNPEPIPELTVEEMRDMEKNL 291
BLAST of Ggra4966.t1 vs. uniprot
Match: R7QE34 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE34_CHOCR) HSP 1 Score: 226 bits (576), Expect = 7.980e-69 Identity = 118/253 (46.64%), Postives = 169/253 (66.80%), Query Frame = 0
Query: 38 PNDTEVDSEKHPVDGFFDEENIADLSPLEVARMRVTYGLVKEHTDAIEKGLPGIDPDSNPLIDPRSFHIRTLPEFPPEVLKQFRKEIPPNVAAESRSVSTYNLWESIQS--GETHELLEEHKETKDNEWTAVDERTMPAGQYSRLHRQSVTSRTGISMRTPATAAQPTPFTTKKMKKGDCPLKDERGRSRVDFRAVGTLKAFLSDNLKILPRKKSGLCAKSQRKLAKAVKTARTMALLDPEPIPRLTVEEMTE 288
P+ +D ++ + F EN ++P E++RMRV YGL+KEH +A+E+ G+DP +NPL+DPRSF +R +P+ P EVL+QFR+++P VA+ SR VST +W+++ S G + E + EW VDERTM + Q+SR+ RQS S + R A P +K KK CPL+DERGR +VDFRA GTL+ +L++ KI+P++KSGL AK+QRKL+KA+KTARTMA++ EP LT EE+T+
Sbjct: 81 PSSGSLDRRENDRESLFSRENTEGIAPGELSRMRVAYGLLKEHVEALEQDFDGVDPHTNPLLDPRSFDVRKMPKLPKEVLEQFRRDLPAEVASSSRPVSTRGIWDALSSSSGAAGAMSPELHDENAAEWAVVDERTMDSQQFSRMQRQSFRSTVDVPFR-----ADPLSAVRRKRKKKSCPLQDERGRVKVDFRAGGTLRPYLTEGGKIIPKRKSGLSAKAQRKLSKAIKTARTMAIIAREPRGTLTYEELTQ 328
BLAST of Ggra4966.t1 vs. uniprot
Match: A0A7V5UTM2 (30S ribosomal protein S18 n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5UTM2_9BACT) HSP 1 Score: 60.8 bits (146), Expect = 1.080e-8 Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 0
Query: 226 VDFRAVGTLKAFLSDNLKILPRKKSGLCAKSQRKLAKAVKTARTMALL 273
+D++ V TLK FL + ++LPRKK+GLCA+ QRKL +A+K AR MALL
Sbjct: 14 IDYKEVETLKKFLDSHARVLPRKKTGLCARHQRKLTRAIKNARIMALL 61
BLAST of Ggra4966.t1 vs. uniprot
Match: A0A1G1YGH5 (30S ribosomal protein S18 n=2 Tax=Candidatus Buchananbacteria TaxID=1817903 RepID=A0A1G1YGH5_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 1.870e-8 Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 0
Query: 226 VDFRAVGTLKAFLSDNLKILPRKKSGLCAKSQRKLAKAVKTARTMALL 273
+D++ TL+ F+S KI+PRK+SG+CAK QRKLA A+K ARTMALL
Sbjct: 24 IDYKDTQTLRRFISSYAKIVPRKRSGVCAKHQRKLANAIKRARTMALL 71
BLAST of Ggra4966.t1 vs. uniprot
Match: A0A7V5D214 (30S ribosomal protein S18 n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=A0A7V5D214_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 2.830e-8 Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 0
Query: 220 ERGRSRVDFRAVGTLKAFLSDNLKILPRKKSGLCAKSQRKLAKAVKTARTMALL 273
+R +DFR+ LK FLS + KI PRKK+G+CA QRKLAKA+K AR M LL
Sbjct: 8 QRNIKEIDFRSAEVLKRFLSPSQKIKPRKKTGVCAFHQRKLAKAIKRARQMGLL 61
BLAST of Ggra4966.t1 vs. uniprot
Match: A0A2H5YDF0 (30S ribosomal protein S18 n=1 Tax=bacterium HR23 TaxID=2035418 RepID=A0A2H5YDF0_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 6.000e-8 Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 0
Query: 195 TPATAAQPTPFTTKKMK-------KGDCPLKDERGRSRVDFRAVGTLKAFLSDNLKILPRKKSGLCAKSQRKLAKAVKTARTMALL 273
TP+ AQ T KK + K CP E+G + +D++ + LK F+ + +KI PR+K+G+CAK QR+LA A+K AR +ALL
Sbjct: 10 TPSATAQATGAQRKKARRRYYPPRKKACPFCVEKGLA-IDYKNIPLLKRFIGEQMKIEPRRKTGVCAKHQRRLATAIKRARHLALL 94
BLAST of Ggra4966.t1 vs. uniprot
Match: A0A1F7UTC3 (30S ribosomal protein S18 n=1 Tax=Candidatus Uhrbacteria bacterium RIFCSPLOWO2_01_FULL_47_24 TaxID=1802401 RepID=A0A1F7UTC3_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 6.100e-8 Identity = 28/51 (54.90%), Postives = 40/51 (78.43%), Query Frame = 0
Query: 227 DFRAVGTLKAFLSDNLKILPRKKSGLCAKSQRKLAKAVKTARTMALLDPEP 277
DF+ V LK F+S +KI+P+++SGLCAK QRK+A+A+K ART+AL+ P
Sbjct: 20 DFKDVNLLKRFVSAGMKIMPQRRSGLCAKHQRKVARAIKHARTLALMPYMP 70
BLAST of Ggra4966.t1 vs. uniprot
Match: A0A0U3G3L8 (30S ribosomal protein S18 n=6 Tax=Eubacteriales TaxID=186802 RepID=A0A0U3G3L8_EUBLI) HSP 1 Score: 58.5 bits (140), Expect = 9.300e-8 Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 0
Query: 220 ERGRSRVDFRAVGTLKAFLSDNLKILPRKKSGLCAKSQRKLAKAVKTARTMALL 273
ER + VD++ V TLK ++S+ KILPR+ +G CAK QRK+ +AVK AR +ALL
Sbjct: 16 ERHETEVDYKDVATLKKYISERGKILPRRATGTCAKHQRKVTEAVKRARNIALL 69
BLAST of Ggra4966.t1 vs. uniprot
Match: A0A3N5T487 (30S ribosomal protein S18 n=1 Tax=Spirochaetaceae bacterium TaxID=1898206 RepID=A0A3N5T487_9SPIO) HSP 1 Score: 59.3 bits (142), Expect = 9.330e-8 Identity = 27/52 (51.92%), Postives = 42/52 (80.77%), Query Frame = 0
Query: 222 GRSRVDFRAVGTLKAFLSDNLKILPRKKSGLCAKSQRKLAKAVKTARTMALL 273
G+ +VD++ +GT++ F+SD KILPR+ +G CAK QRK+++AVK AR +A+L
Sbjct: 43 GKVKVDYKDIGTIRKFVSDRGKILPRRITGTCAKHQRKVSQAVKRARVIAIL 94
BLAST of Ggra4966.t1 vs. uniprot
Match: A0A7C4Y619 (30S ribosomal protein S18 n=1 Tax=Caldisericum exile TaxID=693075 RepID=A0A7C4Y619_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 1.110e-7 Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 0
Query: 226 VDFRAVGTLKAFLSDNLKILPRKKSGLCAKSQRKLAKAVKTARTMALL 273
+D++ V L F+S+ KILPR+ +GLCAK QR+LA+A+K ARTMALL
Sbjct: 30 IDYKDVSKLSRFISEKGKILPRRNTGLCAKHQRQLARAIKRARTMALL 77 The following BLAST results are available for this feature:
BLAST of Ggra4966.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra4966.t1 ID=Ggra4966.t1|Name=Ggra4966.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=295bpback to top |