Ggra4863.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4863.t1
Unique NameGgra4863.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length792
Homology
BLAST of Ggra4863.t1 vs. uniprot
Match: A0A2V3J418 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J418_9FLOR)

HSP 1 Score: 474 bits (1221), Expect = 3.030e-151
Identity = 373/945 (39.47%), Postives = 481/945 (50.90%), Query Frame = 0
Query:    1 MSVSAQRSTKGVLRNLHKLTDALLEENGRLHTALADANAQIAALHAALELLRRDVAARDRYDGEVRDYVAAIIGDIQRQYKPVVDHASPAADAIATSPVRTALADIHAES--------------------------------------QRPPPANDDN------PLSP--PSSTADEAVVSDAPLSEEEATQPTTKQPAEHMEAQ--TAHDSEPEL----EAQSAEQQAVQ------------TREAIILAPQQHE--EHQQLHEPLPEPEQAQRTLHHN----------------EGSTHELQEQDMEAPVPQQPEVTRSVPTEHEQLAVHEEEEEQPSEGEYSAEGPTPIEQHEAQFDHTQPELHEEESHD-----------------------------------------------EAEPTHEDIHSDEDRTQSQGSANIEATRSITAVDTTAHVEQMSHDEEPQLDDEALDVSHLTGVLVPEPSEPLQRHSDEEPPLA--SLLDPSTVPKQVKPGTEGTEQEQSE----------------GQPEHSEQVDHSDELHDLSQDAPEEVRRQSMSSKGVSDDSEYQYHSGDTSGHEGPDVDNIAPQVGEEIQQHQEGGPSTHVVD-----PNPYNSPTQPVASSSQPRLKTIVSLPFAADVVQ----KPGDSPHEVAQKIYEAGGQNYESCSSVFRVIRKKRSSVSDSGEEDDDEQHNIEFVTLRRQTAEVLPWKARKGSDYIDVTNGALAVKPLAAVASRFGTASLSANLRVLEPLRMPASRKDFCYISPEYPDGTSLPYVPVNNVILQHQPRDWVGEEYGVNKVRLSFQKHVFEEVKSIAIEAYKEKYPGSNVMCDSTVTPKRARKIVDLDADAQVDVSVFLGRPIRLGIPEALSLIELDIVGLVLLYIGVNAKNDDGSEAELAFRIHSMVMKRAVRKKL 789
            MS+++QRSTKGVLR+LHKLT+ALLEEN RL  AL +ANAQI +LH  LE LRRDVAARDRYDGEVRD+VA II DIQ  Y P +   S + D    S VRTAL DIH E+                                      Q+P    DDN      PLS   P S AD  +  D  L+ +    P      E   AQ  TA D    L    E Q  EQ++V             T++ + + P+Q+   E   L + +   E+ Q T                    E + HEL EQ  E     +PE+   VP + E    HE              GP P+   E++ +    EL  E                                                   E                                  +  V++   + E +L     D+ HL+ V+VP+PS   Q+  D    L+   LL+P+T   +V      +E+                      P + E      EL ++  +A      QS  ++G+S D E +   G+T+     D+    P    E+ +    G   H  D      +PY SP      S   RLKTI  +P  ADV+     +  D+P EVA+K+YE G   +E+CSSVFRVIRKKR   S S E++ ++ H +EFVTLR QT+EVLPWKAR+GS++IDVTNGALAVKP AA+ASR GT S SANLRVLEP+RMPASRKDFCYISPEYPDGTSLPY+PVNNVI+QHQPR+W GE YGVN V+LSF K VFE++KS+AI  Y+E+YPG+ V C+   T KR RKI+++D+DA VDVS F GRP+RLG+ EAL +IELD+VGLVLLY+GV+AKN DGSEAELAFR+ SMVM+R  +KK+
Sbjct:    1 MSITSQRSTKGVLRSLHKLTNALLEENSRLRAALKEANAQITSLHDGLERLRRDVAARDRYDGEVRDFVATIIEDIQSHYTPRITSGSRSPDQ-EHSEVRTALEDIHLEAAQLPSPTEQEQRTFELEQSVPNAFDALVDETPVVDAVIQQPAQQPDDNQATAVSPLSEKTPESPADFTLAEDTELATQHRAIPVIDDAQEEAVAQVPTAEDGNKHLPLHTEPQHLEQESVDGKSLTESEQTLPTQDNLEVLPEQNIALEEGPLSDGILSEEETQGTRESTLAPSTGTAVATTSRDVEITDHEL-EQAQEIAQASEPEL--QVPPQPEHDLRHER----------GLGGPEPVSMRESEHEL---ELGPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTESQDVDKRGAEPETELSRNEEDIEHLSPVIVPQPS---QKSYDPHRSLSFTQLLEPTTTSTEVADNAGESEEXXXXXXXXXXXXXXXXXXXXNTPRNEET-----ELGEVHDEAEGIQPLQSSGAEGISADLEPRIDDGETASGGTHDIAEERPTA-RELHERPPHGAGDHFSDGDRPSEDPYRSPAGAEGPSVASRLKTIFGMPLIADVIADVIPQSEDTPAEVAKKLYEVGEHAHEACSSVFRVIRKKRRQGSSSSEDEGEKDH-VEFVTLRPQTSEVLPWKAREGSEFIDVTNGALAVKPSAAIASRLGTPSFSANLRVLEPVRMPASRKDFCYISPEYPDGTSLPYIPVNNVIMQHQPRNWSGEPYGVNNVQLSFPKLVFEKIKSLAINVYQEQYPGAAVACEGHSTLKRVRKIIEIDSDATVDVSTFFGRPMRLGVAEALGIIELDLVGLVLLYVGVDAKNHDGSEAELAFRLQSMVMRRHAKKKV 918          
BLAST of Ggra4863.t1 vs. uniprot
Match: R7QG73 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG73_CHOCR)

HSP 1 Score: 65.9 bits (159), Expect = 1.790e-7
Identity = 61/238 (25.63%), Postives = 108/238 (45.38%), Query Frame = 0
Query:  568 FVTLRRQTAEVLPWKARKGSDYIDV-TNGALAVKPLAAVASRFGTASLSANLRVLEPLRMPASRKDF----CYISPEYPDGTSLPYVPVNNVILQHQPRDWVGEE-------------YGVNKVRLSFQKHVFEEVKSIAIEAYKEKY-PGSNVMCDSTVTPKRARKIVDLDADAQVDVSVFLGRPIRLGIPEALSLIELDIVGLVLLYIGVNAKNDDGSEAELAFRIHSMVMKRAVR 786
            + T+      + P +A + S Y+ V     LA+   A  +    TA L  N+ + EP  +P    +      Y+   YPDGTSLPY+P+ +V++Q+  R  VG++             YG + V LS  + V+E +   A +A+  ++ P      +      R      +   A+V   +  G+    G+ +AL L   D+ G  ++Y+  +  ++  SE  L FR H + M+R ++
Sbjct:  185 YTTVFTPKIPMTPIRALETSAYLGVGPTRTLAIMSPAFASMVNDTARLEVNVVINEPF-VPVHTSELPITIMYLGFLYPDGTSLPYIPIRDVVIQY--RQSVGKQSQIKNKERSCYVTYGHDFVYLSMPRPVYERLVRAARKAFHSRFHPDRKWNTEVDYDGDRVWVYAGMKPGAKVQ-GLADGKMGERGVRDALRLSGTDLEGNAMMYMRFSFPHNQDSEPSLCFRFHKLSMEREIK 418          
The following BLAST results are available for this feature:
BLAST of Ggra4863.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4183.030e-15139.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QG731.790e-725.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..433
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000090_piloncontigtig00000090_pilon:319393..321768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4863.t1Ggra4863.t1Gracilaria gracilis GNS1m malemRNAtig00000090_pilon 319393..321768 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4863.t1 ID=Ggra4863.t1|Name=Ggra4863.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=792bp
MSVSAQRSTKGVLRNLHKLTDALLEENGRLHTALADANAQIAALHAALEL
LRRDVAARDRYDGEVRDYVAAIIGDIQRQYKPVVDHASPAADAIATSPVR
TALADIHAESQRPPPANDDNPLSPPSSTADEAVVSDAPLSEEEATQPTTK
QPAEHMEAQTAHDSEPELEAQSAEQQAVQTREAIILAPQQHEEHQQLHEP
LPEPEQAQRTLHHNEGSTHELQEQDMEAPVPQQPEVTRSVPTEHEQLAVH
EEEEEQPSEGEYSAEGPTPIEQHEAQFDHTQPELHEEESHDEAEPTHEDI
HSDEDRTQSQGSANIEATRSITAVDTTAHVEQMSHDEEPQLDDEALDVSH
LTGVLVPEPSEPLQRHSDEEPPLASLLDPSTVPKQVKPGTEGTEQEQSEG
QPEHSEQVDHSDELHDLSQDAPEEVRRQSMSSKGVSDDSEYQYHSGDTSG
HEGPDVDNIAPQVGEEIQQHQEGGPSTHVVDPNPYNSPTQPVASSSQPRL
KTIVSLPFAADVVQKPGDSPHEVAQKIYEAGGQNYESCSSVFRVIRKKRS
SVSDSGEEDDDEQHNIEFVTLRRQTAEVLPWKARKGSDYIDVTNGALAVK
PLAAVASRFGTASLSANLRVLEPLRMPASRKDFCYISPEYPDGTSLPYVP
VNNVILQHQPRDWVGEEYGVNKVRLSFQKHVFEEVKSIAIEAYKEKYPGS
NVMCDSTVTPKRARKIVDLDADAQVDVSVFLGRPIRLGIPEALSLIELDI
VGLVLLYIGVNAKNDDGSEAELAFRIHSMVMKRAVRKKLDK*
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