Ggra4568.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4568.t1
Unique NameGgra4568.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length518
Homology
BLAST of Ggra4568.t1 vs. uniprot
Match: A0A2V3IMK9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMK9_9FLOR)

HSP 1 Score: 163 bits (412), Expect = 1.240e-41
Identity = 112/286 (39.16%), Postives = 152/286 (53.15%), Query Frame = 0
Query:    1 MEKSKQHDTTLPEYEFTEDPKDLMLSVMKWKLYAVENAASKSNQVQPVTDAPPTILANPAAAQSVPSPANPLD-------------NLPSPDDFFNPASEKPNKKRRITVGGVSIIDEQGKDTSNSPVNLGPYPGKGLSIPTITVNELLGGTILQSLVRKRVNLKQAVAGLKWSRGANGEVMALEAEACRLARILNLSLLKFDTMQSALETSEWMEVALKRLYAIIFVESSIQLRNATRAQAWRVAIPILEVYPSAQNLIPELESRLNRQFAAEDTISVHQKARDA 273
            + ++  +D TLP          L    M WKL ++E      N VQ ++  P  +L  P     +  P N LD             N  SP+   +P   K   K  I+VGG+ IIDE  K T   P   GPYP      P + V  L+   +L+ L++K   L+  VA ++W RG  GE+MA EAEA  LARIL+LSL  FD M+ ALET  WMEVA +RLYA+I+VE ++Q  NA+RA AW  A PILE  P A  L+PE +S L R      T++++ KA++A
Sbjct:   92 LRRAHSYDKTLPNPPVQPSAPQLASIAMSWKLISLETI----NNVQ-ISSLPGAVLL-PDVPPPLSEPLN-LDALLGTKETEENQANSSSPNGDHSPPHNK--AKTSISVGGILIIDENAKSTPYRPPRFGPYPSNWTQKPPLCVTVLVAFKLLRGLLQKGRCLESTVADVQWFRGQKGELMAAEAEAYFLARILHLSLQDFDRMEKALETCLWMEVATRRLYALIYVEHAMQTMNASRATAWTAATPILESNPGAPALLPEFDSTLAR------TLAMNAKAQNA 362          
BLAST of Ggra4568.t1 vs. uniprot
Match: A0A2V3IMG4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG4_9FLOR)

HSP 1 Score: 122 bits (306), Expect = 3.180e-29
Identity = 52/95 (54.74%), Postives = 72/95 (75.79%), Query Frame = 0
Query:  261 EDTISVHQKARDALCLHTIDDINFILHDWTNREAETFQRLCYNKLENYGLPIKSSKSCPIGKLVHTVIPITGWKIDLANRIAYPDPTKTLQTICQ 355
            ++TI ++Q   DA+C+H IDDI+F    W+N+EA TF+RLCYNK E+ GLP+K+S SCPI  LV + IP  GW+IDL NR+++PDP KT++T  Q
Sbjct:   45 KNTIVLYQNPGDAVCIHIIDDIDFNFSYWSNQEATTFKRLCYNKFEDNGLPVKNSTSCPIRSLVQSTIPFIGWRIDLPNRLSFPDPAKTIKTTQQ 139          
BLAST of Ggra4568.t1 vs. uniprot
Match: A0A2V3II61 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II61_9FLOR)

HSP 1 Score: 113 bits (283), Expect = 1.660e-26
Identity = 57/113 (50.44%), Postives = 79/113 (69.91%), Query Frame = 0
Query:   97 VGGVSIIDEQGKDTSNSPVNLGPYPGKGLSIPTITVNELLGGTILQSLVRKRVNLKQAVAGLKWSRGANGEVMALEAEACRLARILNLSLLKFDTMQSALETSEWMEVALKRL 209
            +GGV I+DE G+D +  PV LG Y G+ + +P ITV+ELL G   Q LV+K V L+QA+AG+ W+     E++A E E   LARI +L+ LK D+MQ+AL++SEWMEV L R+
Sbjct:    2 IGGVLIVDENGRDNATPPVYLGIYSGREMYLPMITVSELLRGKFNQRLVQKGVELEQAIAGMNWNHDVCRELLASEVEVVTLARIAHLAFLKHDSMQAALKSSEWMEVGLGRV 114          
BLAST of Ggra4568.t1 vs. uniprot
Match: A0A2V3J3D4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3D4_9FLOR)

HSP 1 Score: 92.4 bits (228), Expect = 3.610e-18
Identity = 51/107 (47.66%), Postives = 67/107 (62.62%), Query Frame = 0
Query:   89 PNKKRR--ITVGGVSIIDEQGKDTSNSPVNLGPYPGKGLSIPTITVNELLGGTILQSLVRKRVNLKQAVAGLKWSRGANGEVMALEAEACRLARILNLSLLKFDTMQ 193
            P+KK +  I+VGG+ IIDE GK T N P  LGPYP      P + V EL+   +L+ L++K   L+  VA ++W RG   E+MA EAEA  LARIL+L L  FD M+
Sbjct:   54 PHKKAKKFISVGGILIIDENGKSTPNRPPRLGPYPRNSTQKPLLYVTELVAFKLLRGLLQKGCCLESTVADVQWFRGQKRELMAAEAEAHFLARILHLGLQDFDRME 160          
BLAST of Ggra4568.t1 vs. uniprot
Match: A0A2V3IMF4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMF4_9FLOR)

HSP 1 Score: 73.2 bits (178), Expect = 9.880e-12
Identity = 44/110 (40.00%), Postives = 68/110 (61.82%), Query Frame = 0
Query:    1 MEKSKQHDTTLPEYEFTEDPKDLMLSVMKWKLYAVENAASKSNQVQPVT-DAPPTILANPAAAQSVPSPANPLDNLPSPDDFF--NPASEKPNKKRRIT--VGGVSIIDE 105
            M++ +QHD+TL +++ TED KDL+L  M+ KLYA ENA+     +QPV  D PP      A  Q+    +NPLDN+PSP+ FF      +K ++K  ++  VG  S++++
Sbjct:   33 MKEREQHDSTLLDFDSTEDLKDLVLKFMQLKLYAAENASGSLTNLQPVLHDPPPPASLIQATLQAAHPASNPLDNIPSPETFFPIQLRVQKEHRKSSVSRSVGSPSLMNK 142          
BLAST of Ggra4568.t1 vs. uniprot
Match: A0A2V3IEE9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEE9_9FLOR)

HSP 1 Score: 73.6 bits (179), Expect = 5.680e-11
Identity = 53/166 (31.93%), Postives = 79/166 (47.59%), Query Frame = 0
Query:    1 MEKSKQHDTTLPEYEFTEDPKDLMLSVMKWKLYAVE---NAASKSNQVQPVTDAPPTILANPAAAQSVPSPANPLDN---LPSPDDFFNPASEKPNKKRRITVGGVSIIDEQGKDTSNSPVNLGPYPGKGLSIPTITVNELLGGTILQSLVRKRVNLKQAVAGLKW 160
            + ++  +DTTLP          L    M WKL ++E   NA + S Q   +    P  L+ P    ++       +N     SP+   +P  +K   K  I+VGG+ IIDE GK T N P  LGPYP      P + V EL+   +L+ L++K   L+  VA ++W
Sbjct:   92 LRRAHSYDTTLPNPPVQPSAPQLASIAMSWKLKSLETINNAQNSSLQGAVLLPDVPPPLSEPLNLDALLGTKETEENQANTSSPNGNHSPPHKK--AKTSISVGGILIIDENGKSTPNRPPRLGPYPSNSTQKPPLCVIELVAFKLLRGLLQKGRCLESTVADVQW 255          
The following BLAST results are available for this feature:
BLAST of Ggra4568.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IMK91.240e-4139.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMG43.180e-2954.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II611.660e-2650.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J3D43.610e-1847.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMF49.880e-1240.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEE95.680e-1131.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:1048827..1051608 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4568.t1Ggra4568.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 1048827..1051608 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4568.t1 ID=Ggra4568.t1|Name=Ggra4568.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=518bp
MEKSKQHDTTLPEYEFTEDPKDLMLSVMKWKLYAVENAASKSNQVQPVTD
APPTILANPAAAQSVPSPANPLDNLPSPDDFFNPASEKPNKKRRITVGGV
SIIDEQGKDTSNSPVNLGPYPGKGLSIPTITVNELLGGTILQSLVRKRVN
LKQAVAGLKWSRGANGEVMALEAEACRLARILNLSLLKFDTMQSALETSE
WMEVALKRLYAIIFVESSIQLRNATRAQAWRVAIPILEVYPSAQNLIPEL
ESRLNRQFAAEDTISVHQKARDALCLHTIDDINFILHDWTNREAETFQRL
CYNKLENYGLPIKSSKSCPIGKLVHTVIPITGWKIDLANRIAYPDPTKTL
QTICQALGLSPTAETDINMIESLTGKIIWCALGKRPLLSVLLNTYRYIHD
DSSGNPSEVLRARPVDELHRLSGLLPLAVVDLRKQFSNIVLCFDASPDAG
ALVYTELDDSDTQKFLTQASIPDTKGRAAAIKAFVGSKPWTTAFVHRWRR
KSHIDALEATTAFLGLE*
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