Ggra4523.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4523.t1
Unique NameGgra4523.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length364
Homology
BLAST of Ggra4523.t1 vs. uniprot
Match: A0A2V3IFM2 (Myb-like protein J n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFM2_9FLOR)

HSP 1 Score: 167 bits (422), Expect = 5.330e-43
Identity = 86/176 (48.86%), Postives = 114/176 (64.77%), Query Frame = 0
Query:    3 CVVVQGKVYNDKGHIICGVLNQHDQPCKRVGKCPFHTERIAICEANAVNW---HLLTARTASSCSEQSVLSAPSDTTFVTTSGETSVCSLLPPPKQHFKRGWTREEHYLFLEGLHRYGRGNWKQIAGVVSTKTPTQVQSHAQKYFERQAKGDKHKRSIHDLHLNTDEMQLVRRKMR 175
            CV+  G +YN  GHIICGV NQHD+PC+RVGKCPFH  +  +  +N+ N    H  TA    +   Q+   A              V     PPK+ +K GW+REEHYLFLEGL  YGRG WKQIA +V++++PTQVQSHAQK+ +R  + +K+KRSIHDL L+++EM+ +  KMR
Sbjct:  222 CVIDSGNIYNSDGHIICGVSNQHDKPCRRVGKCPFHLYKAPVSASNSTNGVVDHKGTAVVPQTIGNQTQQLAQLPNLAAPHVNPLKVHKRRIPPKRQYKHGWSREEHYLFLEGLDIYGRGCWKQIAVIVASRSPTQVQSHAQKHDQRNKQVNKNKRSIHDLTLDSEEMKAIAHKMR 397          
BLAST of Ggra4523.t1 vs. uniprot
Match: A0A2V3J3V6 (Myb-like protein J n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3V6_9FLOR)

HSP 1 Score: 165 bits (417), Expect = 1.630e-41
Identity = 90/188 (47.87%), Postives = 118/188 (62.77%), Query Frame = 0
Query:    3 CVVVQGKVYNDKGHIICGVLNQHDQPCKRVGKCPFHTERIAICEANAVNWHLLTARTASSCSEQSVLSAPSDTTFVT--TSGETSVCSLLPPPKQHFKRGWTREEHYLFLEGLHRYGRGNWKQIAGVVSTKTPTQVQSHAQKYFERQAKGDKHKRSIHDLHLNTDEMQLVRRKMRRRPIGVYEFDVQR 188
            CV+V G +YN  GH ICGVLNQHD+PC+R+GKCPFH  R  +  +N++N  ++ A      S     S+PS    +   T+ +  + S   P K+ +K GWTREEHYLFLE L  YGRG WK+ A +V T+ PTQVQSHAQK+F+R  K  K KRSIHDL L + EM+ V  ++R  P       +QR
Sbjct:  152 CVIVTGAIYNSDGHRICGVLNQHDKPCRRIGKCPFHLHRSPLSASNSING-VVDAFGNVPVSITPAASSPSIAPSLRNLTASQPQIRSPAIPRKRQYKHGWTREEHYLFLEALAIYGRGCWKETAAIVGTRLPTQVQSHAQKFFKRGEKRKKVKRSIHDLGLESKEMKQVSARLRADPSPTARSCIQR 338          
BLAST of Ggra4523.t1 vs. uniprot
Match: R7QM55 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM55_CHOCR)

HSP 1 Score: 162 bits (411), Expect = 1.230e-40
Identity = 85/183 (46.45%), Postives = 120/183 (65.57%), Query Frame = 0
Query:    2 RCVVVQGKVYNDKGHIICGVLNQHDQPCKRVGKCPFHTERIAICEANAVNWHLLTARTASSCSEQ--------SVLSAPSDT-TFVTTSGETSVCSLLPPPKQHFKRGWTREEHYLFLEGLHRYGRGNWKQIAGVVSTKTPTQVQSHAQKYFERQAKGDKHKRSIHDLHLNTDEMQLVRRKMR 175
            +C ++ GKVYNDKGH ICGVLNQHD+PCKR+GKCPFH     +   N+ + ++    TA + +          +    P+ T   VT++ +T    +  P KQ +K GW++EEHYLFL GL  + RG+WKQI+ VV ++  TQVQSHAQKYF RQ + +K+KRSIHDL +++ EMQ + ++ R
Sbjct:  338 QCTIIGGKVYNDKGHSICGVLNQHDKPCKRIGKCPFHGVSQPVSAQNSCHGYVDELGTAPAPANDDNGLPGSGNASGDPNGTGVSVTSNPDTGPKGI--PKKQQYKHGWSKEEHYLFLRGLQMHDRGSWKQISNVVQSRNATQVQSHAQKYFLRQKQNNKNKRSIHDLTMDSPEMQELEKRYR 518          
BLAST of Ggra4523.t1 vs. uniprot
Match: A0A6A5BC91 (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BC91_NAEFO)

HSP 1 Score: 136 bits (343), Expect = 6.230e-32
Identity = 71/173 (41.04%), Postives = 104/173 (60.12%), Query Frame = 0
Query:    5 VVQGKVYNDKGHIICGVLNQHDQPCKRVGKCPFHT------------ERIAICEANAVNWHLLTARTASSCSEQSVLSAPSDTTF------VTTSGETSVCSLLPPPKQHFKRGWTREEHYLFLEGLHRYGRGNWKQIAGVVSTKTPTQVQSHAQKYFERQAKGDKHKRSIHD 159
            +V G++YND+G+ ICG +NQH++PC+R+GKCPFH             + I   + +    H   +    S  +       S++T       ++ S E       P  K+ +K+GWT+EEH LFL+GL  +G+GNWK+I+ +V T+TPTQ+QSHAQKYF RQ +  K+KRSIHD
Sbjct:  259 IVNGQMYNDRGYQICGFMNQHNRPCQRIGKCPFHDRMKSDNVISTNGDGIIAAQDSIEPEHFAPSEVLKSKKKXXXXXXQSESTLEVSQPVISQSSENIEVVGKPTTKKPYKQGWTKEEHILFLKGLELHGKGNWKEISNIVVTRTPTQIQSHAQKYFLRQKQQKKNKRSIHD 431          
BLAST of Ggra4523.t1 vs. uniprot
Match: uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFEF800 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFEF800)

HSP 1 Score: 134 bits (337), Expect = 3.770e-31
Identity = 71/173 (41.04%), Postives = 106/173 (61.27%), Query Frame = 0
Query:    5 VVQGKVYNDKGHIICGVLNQHDQPCKRVGKCPFH------------TERIAICEANAVNWHLLTARTASSCSEQSVL------SAPSDTTFVTTSGETSVCSLLPPPKQHFKRGWTREEHYLFLEGLHRYGRGNWKQIAGVVSTKTPTQVQSHAQKYFERQAKGDKHKRSIHD 159
            +V G++YND+G+ ICG +NQH++PC+R+GKCPFH            ++ I   + +    H   +    S  ++          +  D+T V T+ +       P  K+ +K+GWT+EEH LFL+GL  +G+GNWK+I+ +V T+TPTQ+QSHAQKYF RQ +  K+KRSIHD
Sbjct:  251 IVNGQMYNDRGYQICGFMNQHNRPCQRIGKCPFHDRMKSENVISTNSDGIISAQDSIELEHFAPSEVLKSKKKKXXXXXXXXSQSSLDSTQVATTEKIETVDK-PATKKPYKQGWTKEEHILFLKGLELHGKGNWKEISNIVVTRTPTQIQSHAQKYFLRQKQQKKNKRSIHD 422          
BLAST of Ggra4523.t1 vs. uniprot
Match: A0A7S4MDT2 (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MDT2_9EUKA)

HSP 1 Score: 125 bits (313), Expect = 7.300e-29
Identity = 70/160 (43.75%), Postives = 94/160 (58.75%), Query Frame = 0
Query:    4 VVVQGKVYNDKGHIICGVLNQHDQPCKRVGKCPFHTERIAICEANAVNWHLLTARTASSCSEQSVLSAPSDTTFVTTSGETSVCSLLPPPKQH-FKRGWTREEHYLFLEGLHRYGRGNWKQIAGVVSTKTPTQVQSHAQKYFERQAKGDKHKRSIHDLHL 162
            V + G  YN +G+ ICG LNQH +PC+R+G CPFH +               T  T    ++    S P+         E  V    PP K+  +KRGWT++EH LFL GL  +G+G WK+I+ +V T+TPTQ+QSHAQKYF RQ +  K+KRSIHD+ L
Sbjct:   86 VEIDGVHYNSRGYEICGQLNQHSKPCQRIGSCPFHKK---------------TGETDGKKNKTPNKSKPAR--------EKKVNGADPPIKRGPYKRGWTKDEHILFLNGLQIHGKGAWKEISMIVQTRTPTQIQSHAQKYFLRQKQEVKNKRSIHDISL 222          
BLAST of Ggra4523.t1 vs. uniprot
Match: D2V1P6 (SANT domain-containing protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V1P6_NAEGR)

HSP 1 Score: 124 bits (311), Expect = 1.040e-27
Identity = 70/190 (36.84%), Postives = 105/190 (55.26%), Query Frame = 0
Query:    5 VVQGKVYNDKGHIICGVLNQHDQPCKRVGKCPFHTERIAICEANAVNWHLLTARTASSCSEQ--------------------------SVLSAPSDTTFVTTSGETSVCSLLPPPKQHFKRGWTREEHYLFLEGLHRYGRGNWKQIAGVVSTKTPTQVQSHAQKYFERQAKGDKHKRSIHDLHLNTDEMQ 168
            ++ G++YND+G+ ICG +NQH++PC+R+GKCPFH +R+   +  + N   + A   S   E                            V S  S                 P  K+ +K+GWT+EEH LFL+GL  +G+G+WK+I+ +V T++PTQ+QSHAQKYF RQ +  K+KRSIHD  ++  + Q
Sbjct:  243 IINGEMYNDRGYKICGFMNQHNRPCQRIGKCPFH-DRMKSDKPLSTNSDGIIAAQDSIEPEHFAPTQVVKEKXXXXXXXXXXXXXXXXEVPSVESXXXXXXXXXXXXXXEDKPATKKPYKQGWTKEEHILFLKGLELHGKGSWKEISAIVGTRSPTQIQSHAQKYFLRQKQQKKNKRSIHDFTMDDMKKQ 431          
BLAST of Ggra4523.t1 vs. uniprot
Match: A0A2P6NH67 (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NH67_9EUKA)

HSP 1 Score: 116 bits (290), Expect = 3.280e-26
Identity = 63/154 (40.91%), Postives = 80/154 (51.95%), Query Frame = 0
Query:   14 KGHIICGVLNQHDQPCKRVGKCPFHTERIAICEANAVNWHLLTARTASSCSEQSVLSAPSDTTFVTTSGETSVCSLLPPPKQHFKRGWTREEHYLFLEGLHRYGRGNWKQIAGVVSTKTPTQVQSHAQKYFERQAKGDKHKRSIHDLHLNTDEM 167
            +  +ICGVLNQ+ +PC+R+GKCPFH+ R                                                    K   KRGWT+EEH  FL+GL  +GRG WK+IA +V TKTPTQ+QSHAQKYF RQ + +K+KRSIHD  L   E+
Sbjct:   51 EAEVICGVLNQNGKPCQRIGKCPFHSSRA-------------------------------------------------DKKSVPKRGWTKEEHAKFLQGLRIHGRGRWKEIASIVGTKTPTQIQSHAQKYFLRQQQTNKNKRSIHDYSLEDLEV 155          
BLAST of Ggra4523.t1 vs. uniprot
Match: A0A2P6N8F7 (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N8F7_9EUKA)

HSP 1 Score: 115 bits (288), Expect = 6.460e-25
Identity = 65/154 (42.21%), Postives = 80/154 (51.95%), Query Frame = 0
Query:   14 KGHIICGVLNQHDQPCKRVGKCPFHTERIAICEANAVNWHLLTARTASSCSEQSVLSAPSDTTFVTTSGETSVCSLLPPPKQHFKRGWTREEHYLFLEGLHRYGRGNWKQIAGVVSTKTPTQVQSHAQKYFERQAKGDKHKRSIHDLHLNTDEM 167
            K  + CGV+NQ+ +PC+R GKCPFH                         S++   SAP                         KRGWT+EEH  FL+GL  YGRGNWK+I  VV TKT TQ+QSHAQKYF RQ + +K K+SIHDL L   E+
Sbjct:  101 KKEVYCGVVNQNGKPCQRTGKCPFH-------------------------SQKEKKSAP-------------------------KRGWTKEEHAKFLQGLKMYGRGNWKEITSVVGTKTSTQIQSHAQKYFLRQKQTNKSKKSIHDLSLTDQEI 204          
BLAST of Ggra4523.t1 vs. uniprot
Match: R7QP30 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QP30_CHOCR)

HSP 1 Score: 112 bits (281), Expect = 6.300e-24
Identity = 65/172 (37.79%), Postives = 96/172 (55.81%), Query Frame = 0
Query:    4 VVVQGKVYNDKGHIICGVLNQHDQPCKRVGKCPFHTERIAICEANAVNWHLLTARTAS-SCSEQSVLSAPSDT------TFVTTSGETSVCS------LLPPPKQHFKRGWTREEHYLFLEGLHRYGRGNWKQIAGVVSTKTPTQVQSHAQKYFERQAKGD--KHKRSIHDL 160
            + V G+ +N +G+ +CGV NQ  + C R+G CPFH+++ +  +          A T+S S S +++    ++T      T V   G T           +PP +  FKR WT +EH  FL+ + R+G+G WK+IA  V T+   Q QSHAQKYF RQAK D  + K+SIHD+
Sbjct:   51 IFVNGQAFNGRGYPVCGVANQRGRLCGRIGSCPFHSKKNSSAKRPRSGVSTTDASTSSNSTSGKAMTGTENETGNGPLHTIVKPGGHTRSAHPAIRQMAIPPRRSRFKRSWTTDEHRRFLQAMRRHGKGKWKEIAVEVKTRNANQCQSHAQKYFLRQAKSDSERKKKSIHDV 222          
The following BLAST results are available for this feature:
BLAST of Ggra4523.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFM25.330e-4348.86Myb-like protein J n=1 Tax=Gracilariopsis chorda T... [more]
A0A2V3J3V61.630e-4147.87Myb-like protein J n=1 Tax=Gracilariopsis chorda T... [more]
R7QM551.230e-4046.45Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6A5BC916.230e-3241.04Uncharacterized protein n=1 Tax=Naegleria fowleri ... [more]
uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFEF8003.770e-3141.04uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A7S4MDT27.300e-2943.75Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
D2V1P61.040e-2736.84SANT domain-containing protein n=1 Tax=Naegleria g... [more]
A0A2P6NH673.280e-2640.91Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A2P6N8F76.460e-2542.21Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
R7QP306.300e-2437.79Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 97..146
e-value: 5.2E-11
score: 52.6
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 98..144
score: 7.282382
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 101..144
e-value: 3.7882E-11
score: 55.6594
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 99..147
e-value: 3.7E-13
score: 47.6
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 100..143
e-value: 1.6E-12
score: 47.4
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 94..148
score: 16.035847
NoneNo IPR availableGENE3D1.10.10.60coord: 99..149
e-value: 7.7E-18
score: 66.4
IPR043363Transcription factor DIVARICATA-likePANTHERPTHR44042DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 85..171
IPR017884SANT domainPROSITEPS51293SANTcoord: 96..148
score: 14.643382
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 99..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:828436..829527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4523.t1Ggra4523.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 828436..829527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4523.t1 ID=Ggra4523.t1|Name=Ggra4523.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=364bp
MRCVVVQGKVYNDKGHIICGVLNQHDQPCKRVGKCPFHTERIAICEANAV
NWHLLTARTASSCSEQSVLSAPSDTTFVTTSGETSVCSLLPPPKQHFKRG
WTREEHYLFLEGLHRYGRGNWKQIAGVVSTKTPTQVQSHAQKYFERQAKG
DKHKRSIHDLHLNTDEMQLVRRKMRRRPIGVYEFDVQRREGTATGTATGT
ASVHSMVNGCARMMEEVVIYGGGVTTTAGAAAMAAPALSPALSPALSPAL
SPALSPSPALSPALVASRQYARDGGSDGISYGGNGGGNGVRERTWYTESG
VRRNEAYRAETHLVQQEAKRVRYYAPAHRTDATRLRLGALGEQQQRQQQR
GACDDGMYAREIW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR043363DIVARICATA-like
IPR017884SANT_dom
IPR009057Homeobox-like_sf