Ggra4180.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4180.t1
Unique NameGgra4180.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length212
Homology
BLAST of Ggra4180.t1 vs. uniprot
Match: A0A2V3IZJ9 (PITH domain-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZJ9_9FLOR)

HSP 1 Score: 352 bits (904), Expect = 7.960e-122
Identity = 177/212 (83.49%), Postives = 188/212 (88.68%), Query Frame = 0
Query:    1 MDGGRSGHTCSHAHHXXXXXDEGGGEAWALFEQVNTSALICLNEAQPNSLKHVLRPWYKRCDPSLPTLKSDADEQLLMCIPFVSPVKIKSICIIGAGDVENPSHMKAYLNDEVLDFSSVERKRPIQEWDLTERNVDGVIEYPTKYTKFQNVSKLWLFISANFGADFTEIRYIGLKGEYTKYKREAVNTVYESRPVKASEDVKSI-NTPRMGM 211
            M  GR GHTCSHA  XXXXX  GGGEAWALFEQVNT ALICLNEA P+SLKHVLRPWYKRCDPSLPTLKSDADEQLLMCIPFVSPVKIKSICIIGAG   +PSHMKAY+NDEVLDFSSV  KRPIQEWDL E N+DG+++YPTKYT+FQNVSKLWLF+  NFGAD TEI YIGLKGEYTKYKREAVNTVYESRP+KASEDVK+  N P MGM
Sbjct:    1 MADGRHGHTCSHAXXXXXXXXXGGGEAWALFEQVNTEALICLNEADPDSLKHVLRPWYKRCDPSLPTLKSDADEQLLMCIPFVSPVKIKSICIIGAGGGVSPSHMKAYINDEVLDFSSVASKRPIQEWDLIENNIDGMVDYPTKYTRFQNVSKLWLFVDTNFGADLTEIMYIGLKGEYTKYKREAVNTVYESRPLKASEDVKNTSNMPSMGM 212          
BLAST of Ggra4180.t1 vs. uniprot
Match: R7QDS8 (PITH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDS8_CHOCR)

HSP 1 Score: 294 bits (752), Expect = 2.290e-98
Identity = 133/191 (69.63%), Postives = 165/191 (86.39%), Query Frame = 0
Query:   21 DEGGGEAWALFEQVNTSALICLNEAQPNSLKHVLRPWYKRCDPSLPTLKSDADEQLLMCIPFVSPVKIKSICIIGAGDVENPSHMKAYLNDEVLDFSSVERKRPIQEWDLTERNVDGVIEYPTKYTKFQNVSKLWLFISANFGADFTEIRYIGLKGEYTKYKREAVNTVYESRPVKASEDVKSINTPRMGM 211
            ++ GGEAW+L+EQ++T+AL CLNEAQPNSLKHVLRPW++RCD SLP L SDADEQLLMCIPF SP+K+KSICIIG GDVENP+ M A++N+E +DF + E+  P+Q W+L ERNV+G +EYPTKYTKFQNVSKLWLF+S NFGA+ T I YIGL+GE+TKYKREAV+TVYESRP+KA++DV + +   MGM
Sbjct:   43 EDSGGEAWSLYEQIDTNALKCLNEAQPNSLKHVLRPWHQRCDASLPMLVSDADEQLLMCIPFTSPIKLKSICIIGGGDVENPAKMSAFINNETMDFGNAEQTTPVQTWELVERNVEGAVEYPTKYTKFQNVSKLWLFVSENFGAEVTRIMYIGLRGEFTKYKREAVHTVYESRPLKAAKDVMANHMQGMGM 233          
BLAST of Ggra4180.t1 vs. uniprot
Match: A0A1X6PFA3 (PITH domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFA3_PORUM)

HSP 1 Score: 191 bits (484), Expect = 1.010e-57
Identity = 98/195 (50.26%), Postives = 132/195 (67.69%), Query Frame = 0
Query:   22 EGGGEAWALFEQVNTSALICLNEAQPNS-LKHVLRPWYKRCDPSLPTLKSDADEQLLMCIPFVSPVKIKSICIIG---AGDVENPSHMKAYLND-EVLDFSSVERKRPIQEWDLTERNVDGVIEYPTKYTKFQNVSKLWLFISANFGADFTEIRYIGLKGEYTKYKREAVNTVYESRPVKASEDVKSINTPRMGM 211
            + GGE W+L++QV+      LN A P++ L  +LRP + R D SLP + SDADEQLL+C+ FV PVKIKSIC+IG   +G   NP+HM A++N  E  DFS  E  +  Q+W+L   +V G +EYPT++T+FQNV+ L LFI  NFGAD T ++Y+GLKGE+T+Y+REAV T YE+RPV         N P M +
Sbjct:   36 DAGGEEWSLYQQVDLPRSRVLNAAHPSTALAAILRPRHARTDTSLPVVTSDADEQLLICLSFVCPVKIKSICVIGGAGSGGSGNPAHMAAFVNPPEGFDFSGAEGAKSTQDWELVRDSVAGGVEYPTRFTRFQNVTSLALFIDRNFGADETIVQYVGLKGEFTRYRREAVVTTYEARPVAGDHKAPDENKPSMDL 230          
BLAST of Ggra4180.t1 vs. uniprot
Match: A0A7S0G7B6 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G7B6_9RHOD)

HSP 1 Score: 178 bits (452), Expect = 3.560e-53
Identity = 89/173 (51.45%), Postives = 120/173 (69.36%), Query Frame = 0
Query:   23 GGGEA-WALFEQVNTSALICLNEAQPNSLKHVLRPWYKRCDPSLPTLKSDADEQLLMCIPFVSPVKIKSICIIGAGDVENPSHMKAYLNDEVLDFSSVERKRPIQEWDLTERNVDGVIEYPTKYTKFQNVSKLWLFISANFGADFTEIRYIGLKGEYTKYKREAVNTVYESRP 194
            GGG+  W L++ V+T+    LN A  ++L+ VLRPW KR +   P L+SDADEQL++ +PF + V+I+++ +IG+G   NP  +K +LN E +DF S E   P QEW+L   + +G +EY TKYTK+QNV  +WLFIS NFG D T I+YIGLKG  TKY+REAV T YE RP
Sbjct:   21 GGGDGKWDLYKDVDTTRCSVLNAADEDALEGVLRPWEKRLERE-PMLQSDADEQLMIYLPFTTAVRIQALSLIGSGGRANPKTLKVFLNVEHMDFDSAESTAPTQEWELVPDDREGNVEYTTKYTKYQNVRSMWLFISENFGGDNTSIQYIGLKGTSTKYRREAVKTSYELRP 192          
BLAST of Ggra4180.t1 vs. uniprot
Match: I0YIF8 (DUF1000-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YIF8_COCSC)

HSP 1 Score: 165 bits (418), Expect = 4.190e-48
Identity = 88/172 (51.16%), Postives = 115/172 (66.86%), Query Frame = 0
Query:   25 GEAWALFEQVNTSALICLNEAQPNSLKHVLRPWYKRCDPSLPTLKS-DADEQLLMCIPFVSPVKIKSICIIGAGDVENPSHMKAYLNDEVLDFSSVERKRPIQEWDLTERNVDGVIEYPTKYTKFQNVSKLWLFISANFGADFTEIRYIGLKGEYTKYKREAVNTVYESRPV 195
            G AW+L E ++ S +  LNEAQ  S++ V RPW +R D S PTL S D D +LL+ +PF   VKIK+I IIG  D   P  ++AY N + LDFS V    P+Q+WDL E N+ G IEYPT+  KF  V  + L+I +NFGAD T I +IGLKGE+T+ KREAV  VYE++P+
Sbjct:   16 GPAWSLHEHIDHSNIAALNEAQAGSVRSVFRPWAERLDLSQPTLNSNDDDPELLIHVPFNGSVKIKAISIIGGADGTAPLQLRAYTNRDDLDFSLVADLPPVQQWDLQE-NLTGQIEYPTQVPKFSGVHSIDLYIPSNFGADSTRIHFIGLKGEFTEGKREAVIAVYEAKPL 186          
BLAST of Ggra4180.t1 vs. uniprot
Match: PITH domain-containing protein 1 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A379B9 (PITH domain-containing protein 1 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A379B9)

HSP 1 Score: 165 bits (417), Expect = 5.930e-48
Identity = 90/188 (47.87%), Postives = 118/188 (62.77%), Query Frame = 0
Query:    9 TCSHAHHXXXXXDEGGGEAWALFEQVNTSALICLNEAQPNSLKHVLRPWYKRCDPSLPTLKS-DADEQLLMCIPFVSPVKIKSICIIGAGDVENPSHMKAYLNDEVLDFSSVERKRPIQEWDLTERNVDGVIEYPTKYTKFQNVSKLWLFISANFGADFTEIRYIGLKGEYTKYKREAVNT-VYESRP 194
             C H H      D      W+L++ ++ S +  LNEA P S+K V + W +R D S   LKS + D +LL+ IPF S VKIKSICIIG  D   PS M+A++N E +DFS  +  + +QEWDL E N  GV+EY T+Y+KFQ+V+ + L    NFG D TEI+YIG KGE T+ KR+ V T VYE RP
Sbjct:    2 ACLHDH---SCEDHNCSSDWSLYKHIDLSKVSALNEATPGSVKSVFKAWEQRLDSSGDHLKSNEGDPELLVFIPFTSDVKIKSICIIGGPDGTGPSKMRAFINREGIDFSDAQSMQVVQEWDLVE-NTQGVLEYQTRYSKFQSVANITLHFPGNFGGDTTEIQYIGFKGEATQLKRDVVATIVYELRP 185          
BLAST of Ggra4180.t1 vs. uniprot
Match: A0A7I4CCX7 (PITH domain-containing protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4CCX7_PHYPA)

HSP 1 Score: 164 bits (414), Expect = 1.490e-47
Identity = 79/168 (47.02%), Postives = 112/168 (66.67%), Query Frame = 0
Query:   28 WALFEQVNTSALICLNEAQPNSLKHVLRPWYKRCDPSLPTLKSDADEQLLMCIPFVSPVKIKSICIIGAGDVENPSHMKAYLNDEVLDFSSVERKRPIQEWDLTERNVDGVIEYPTKYTKFQNVSKLWLFISANFGADFTEIRYIGLKGEYTKYKREAV-NTVYESRP 194
            W+L++ ++ + +  LNE    S K V +PW +R D S     +D D +L++ IPF + VKIKSIC++G  D  +PS M+A+LN + +DFS      P+QEW+L E N+ G +EYPTKY KFQ V+ L L   +NFGAD T + YIGL+GE T+ KR+A+ NTVYE+ P
Sbjct:   19 WSLYKNIDITGVTALNETVEGSAKSVFKPWEQRSDLSTVLASNDDDAELIVFIPFTTDVKIKSICVVGGVDGHSPSKMRAFLNRDDIDFSQANDLTPVQEWELAE-NIRGELEYPTKYAKFQGVASLTLHFPSNFGADATHVHYIGLRGEATQMKRDAIANTVYEAMP 185          
BLAST of Ggra4180.t1 vs. uniprot
Match: K3XM38 (PITH domain-containing protein n=39 Tax=Poaceae TaxID=4479 RepID=K3XM38_SETIT)

HSP 1 Score: 162 bits (411), Expect = 4.780e-47
Identity = 88/197 (44.67%), Postives = 122/197 (61.93%), Query Frame = 0
Query:    9 TCSHAHHXXXXXDEGGGEAWALFEQVNTSALICLNEAQPNSLKHVLRPWYKRCDPSLPTLKS-DADEQLLMCIPFVSPVKIKSICIIGAGDVENPSHMKAYLNDEVLDFSSVERKRPIQEWDLTERNVDGVIEYPTKYTKFQNVSKLWLFISANFGADFTEIRYIGLKGEYTKYKREAVNT-VYESRPVKASEDVKS 203
             C H H      D      W+L+  V+T  ++ LNE+ P S+K V +PW +R D S   L+S D D +LL+ IPF S VKIKSI ++G  D  +PS M+A++N E +DFS  +  +P+QEW+L E N+ G +EY T+Y++FQ V+ L L  S NFG D T+I YIGL+GE T+ KR+ V T VYE  P  +    KS
Sbjct:    2 ACLHDH---SCEDHNCAADWSLYNHVDTPKVVALNESVPGSVKSVFKPWEQRLDTSGGFLESNDGDPELLIFIPFTSDVKIKSISVVGGADGTSPSRMRAFINREGIDFSDAQNMQPVQEWELAE-NLQGTLEYQTRYSRFQGVANLTLHFSDNFGGDTTKIYYIGLRGEATQNKRDVVATIVYEVMPNPSDHKTKS 194          
BLAST of Ggra4180.t1 vs. uniprot
Match: L8GL73 (Thioredoxin family Trp26 family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GL73_ACACA)

HSP 1 Score: 162 bits (411), Expect = 5.710e-47
Identity = 85/186 (45.70%), Postives = 121/186 (65.05%), Query Frame = 0
Query:    7 GHTCSHAHHXXXXXDEGGGEAWALFEQVNTSALICLNEAQPNSLKHVLRPWYKRCDPSLPTLKSDADEQLLMCIPFVSPVKIKSICIIGAGDVENPSHMKAYLNDEVLDFSSVERKRPIQEWDLTERNVDGVIEYPTKYTKFQNVSKLWLFISANFGADFTEIRYIGLKGEYTKYKREAVNTVYES 192
            G +C+H H      +   G  ++L++ ++T  L CLNE    ++  V +PW +R D +   ++SD DEQL++ IPF + +K+K+I IIG  D  +P  +KA++N E +DFSSV+   P QEW+L+E N  G IEYPT+ TKFQNV+ L L+I  NFGA+ T I YIGLKGE+    R+AVN  YES
Sbjct:    8 GGSCAHEHTEEPEKER--GAEYSLYQYIDTGGLTCLNERGSGTVAKVFKPWDQRLDRTA-VVESDTDEQLIIHIPFTASIKLKAINIIGGADGTSPGKLKAWINREDIDFSSVDDVAPTQEWELSE-NPQGEIEYPTRITKFQNVTSLTLYIPENFGAERTIISYIGLKGEFKTLSRKAVNVTYES 189          
BLAST of Ggra4180.t1 vs. uniprot
Match: A0A0J8CW87 (PITH domain-containing protein n=5 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0J8CW87_BETVV)

HSP 1 Score: 162 bits (410), Expect = 6.560e-47
Identity = 89/188 (47.34%), Postives = 118/188 (62.77%), Query Frame = 0
Query:    9 TCSHAHHXXXXXDEGGGEAWALFEQVNTSALICLNEAQPNSLKHVLRPWYKRCDPSLPTLKS-DADEQLLMCIPFVSPVKIKSICIIGAGDVENPSHMKAYLNDEVLDFSSVERKRPIQEWDLTERNVDGVIEYPTKYTKFQNVSKLWLFISANFGADFTEIRYIGLKGEYTKYKRE-AVNTVYESRP 194
             CSH H      D      W+L++ ++ S +  LNEA P S K V R W +R + S   L+S D D +L++ IPF S VKIK I I+G  D  +PS M+A++N E +DFS  +  +P+QEWDL E N+ GV+EY T+Y+KFQ+V  L L    NFGAD  +I YIGLKGE T+ KR+ AVN VYE  P
Sbjct:    2 ACSHDH---SCEDHNCSSDWSLYKHIDLSKVSALNEAVPGSAKSVFRSWEQRLNSSGAFLESNDGDPELIVFIPFTSDVKIKGISIVGGADGTSPSKMRAFINREGIDFSDAQSMQPVQEWDLAE-NLQGVLEYQTRYSKFQSVGNLTLHFPDNFGADTGQIHYIGLKGEATQLKRDVAVNIVYEIMP 185          
The following BLAST results are available for this feature:
BLAST of Ggra4180.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZJ97.960e-12283.49PITH domain-containing protein 1 n=1 Tax=Gracilari... [more]
R7QDS82.290e-9869.63PITH domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A1X6PFA31.010e-5750.26PITH domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S0G7B63.560e-5351.45Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
I0YIF84.190e-4851.16DUF1000-domain-containing protein n=1 Tax=Coccomyx... [more]
PITH domain-containing protein 1 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A379B95.930e-4847.87PITH domain-containing protein 1 n=1 Tax=Prosopis ... [more]
A0A7I4CCX71.490e-4747.02PITH domain-containing protein n=4 Tax=Physcomitri... [more]
K3XM384.780e-4744.67PITH domain-containing protein n=39 Tax=Poaceae Ta... [more]
L8GL735.710e-4745.70Thioredoxin family Trp26 family protein n=1 Tax=Ac... [more]
A0A0J8CW876.560e-4747.34PITH domain-containing protein n=5 Tax=Chenopodiac... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010400PITH domainPFAMPF06201PITHcoord: 30..177
e-value: 2.4E-38
score: 131.6
IPR010400PITH domainPROSITEPS51532PITHcoord: 19..194
score: 55.007824
IPR037047PITH domain superfamilyGENE3D2.60.120.470PITH domaincoord: 23..189
e-value: 3.2E-46
score: 159.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR12175:SF1PITH DOMAIN-CONTAINING PROTEIN 1coord: 8..198
IPR045099PITH domain-containing protein 1-likePANTHERPTHR12175AD039 HT014 THIOREDOXIN FAMILY TRP26coord: 8..198
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 17..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000853_piloncontigtig00000853_pilon:516843..517478 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4180.t1Ggra4180.t1Gracilaria gracilis GNS1m malemRNAtig00000853_pilon 516843..517478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4180.t1 ID=Ggra4180.t1|Name=Ggra4180.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=212bp
MDGGRSGHTCSHAHHEHDHDDEGGGEAWALFEQVNTSALICLNEAQPNSL
KHVLRPWYKRCDPSLPTLKSDADEQLLMCIPFVSPVKIKSICIIGAGDVE
NPSHMKAYLNDEVLDFSSVERKRPIQEWDLTERNVDGVIEYPTKYTKFQN
VSKLWLFISANFGADFTEIRYIGLKGEYTKYKREAVNTVYESRPVKASED
VKSINTPRMGM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010400PITH_dom
IPR037047PITH_dom_sf
IPR045099PITH1-like
IPR008979Galactose-bd-like_sf