Ggra4032.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4032.t1
Unique NameGgra4032.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length161
Homology
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BLAST of Ggra4032.t1 vs. uniprot
Match: A0A2V3ILR6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILR6_9FLOR)

HSP 1 Score: 132 bits (331), Expect = 1.600e-34
Identity = 68/139 (48.92%), Postives = 93/139 (66.91%), Query Frame = 0 
Query:    1 MVEIDADSAFALLYGLVSLFSVTTFGYAGEWCDLRTSCPNRVRAIIAFAVFVFLLSALMFVAQLIGLAFVESLHLFITPVIFILNTVVAALAISPRTELRTSFTSPVEIAWWTEVLSVLLIFLAFADRSAPAKEKEGLE 139
            MVE D D  F +LYGLV+L++   FG   E CDL   CP+R +A +AFAV VF++SA+MF   ++ L+F++ +H+  TPV+F LNTVVAA  ISPR   R S  S  ++AWW+E +  +L+ +AF D S PA  K GLE
Sbjct:  148 MVEFDTDMLFTMLYGLVALYNAAIFGNLAEVCDLSALCPSRAKAALAFAVLVFIISAIMFGGMMLRLSFLDRVHMLATPVLFALNTVVAATGISPRLVGRESPVSS-QLAWWSETICFILVIIAFLDLSRPAPAKPGLE 285
The following BLAST results are available for this feature:
BLAST of Ggra4032.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILR61.600e-3448.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..160
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 95..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..94
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..66
NoneNo IPR availableTMHMMTMhelixcoord: 72..94
NoneNo IPR availableTMHMMTMhelixcoord: 107..126
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:406370..406852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4032.t1Ggra4032.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 406370..406852 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4032.t1 ID=Ggra4032.t1|Name=Ggra4032.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=161bp
MVEIDADSAFALLYGLVSLFSVTTFGYAGEWCDLRTSCPNRVRAIIAFAV
FVFLLSALMFVAQLIGLAFVESLHLFITPVIFILNTVVAALAISPRTELR
TSFTSPVEIAWWTEVLSVLLIFLAFADRSAPAKEKEGLEPHVPVSLQQSE
DTVPPPMANA*
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