Ggra4032.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4032.t1
Unique NameGgra4032.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length161
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:406370..406852 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4032Ggra4032Gracilaria gracilis GNS1m malegenetig00000908_pilon 406370..406852 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4032.t1.stop1Ggra4032.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000908_pilon 406370..406372 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4032.t1.CDS1Ggra4032.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000908_pilon 406370..406852 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4032.t1.exon1Ggra4032.t1.exon1Gracilaria gracilis GNS1m maleexontig00000908_pilon 406370..406852 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4032.t1.start1Ggra4032.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000908_pilon 406850..406852 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4032.t1Ggra4032.t1Gracilaria gracilis GNS1m malepolypeptidetig00000908_pilon 406370..406852 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4032.t1 ID=Ggra4032.t1|Name=Ggra4032.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=161bp
MVEIDADSAFALLYGLVSLFSVTTFGYAGEWCDLRTSCPNRVRAIIAFAV
FVFLLSALMFVAQLIGLAFVESLHLFITPVIFILNTVVAALAISPRTELR
TSFTSPVEIAWWTEVLSVLLIFLAFADRSAPAKEKEGLEPHVPVSLQQSE
DTVPPPMANA*
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spliced messenger RNA

>Ggra4032.t1 ID=Ggra4032.t1|Name=Ggra4032.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=483bp|location=Sequence derived from alignment at tig00000908_pilon:406370..406852- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTGAGATTGACGCTGACTCTGCGTTCGCGCTGCTTTACGGCCTGGT
GTCGCTGTTCTCGGTTACTACCTTCGGCTACGCGGGCGAATGGTGTGACC
TTAGAACCTCATGTCCCAATCGTGTAAGGGCCATCATAGCCTTTGCAGTC
TTCGTCTTCCTGCTGTCCGCGCTCATGTTCGTCGCCCAACTCATTGGACT
TGCCTTTGTCGAGTCACTTCATCTGTTCATCACTCCCGTCATCTTCATAT
TGAACACCGTCGTTGCCGCGCTCGCCATCTCGCCGCGCACGGAACTACGC
ACTTCGTTTACGTCCCCCGTTGAGATCGCGTGGTGGACAGAGGTGCTGTC
TGTGTTGCTCATCTTCTTGGCGTTTGCTGACAGGAGTGCACCGGCGAAGG
AGAAGGAGGGGTTGGAACCCCATGTGCCGGTTTCGCTTCAGCAGTCGGAG
GACACCGTGCCCCCGCCCATGGCTAACGCCTGA
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protein sequence of Ggra4032.t1

>Ggra4032.t1 ID=Ggra4032.t1|Name=Ggra4032.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=161bp
MVEIDADSAFALLYGLVSLFSVTTFGYAGEWCDLRTSCPNRVRAIIAFAV
FVFLLSALMFVAQLIGLAFVESLHLFITPVIFILNTVVAALAISPRTELR
TSFTSPVEIAWWTEVLSVLLIFLAFADRSAPAKEKEGLEPHVPVSLQQSE
DTVPPPMANA*
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mRNA from alignment at tig00000908_pilon:406370..406852-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4032.t1 ID=Ggra4032.t1|Name=Ggra4032.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=483bp|location=Sequence derived from alignment at tig00000908_pilon:406370..406852- (Gracilaria gracilis GNS1m male)
ATGGTTGAGATTGACGCTGACTCTGCGTTCGCGCTGCTTTACGGCCTGGT
GTCGCTGTTCTCGGTTACTACCTTCGGCTACGCGGGCGAATGGTGTGACC
TTAGAACCTCATGTCCCAATCGTGTAAGGGCCATCATAGCCTTTGCAGTC
TTCGTCTTCCTGCTGTCCGCGCTCATGTTCGTCGCCCAACTCATTGGACT
TGCCTTTGTCGAGTCACTTCATCTGTTCATCACTCCCGTCATCTTCATAT
TGAACACCGTCGTTGCCGCGCTCGCCATCTCGCCGCGCACGGAACTACGC
ACTTCGTTTACGTCCCCCGTTGAGATCGCGTGGTGGACAGAGGTGCTGTC
TGTGTTGCTCATCTTCTTGGCGTTTGCTGACAGGAGTGCACCGGCGAAGG
AGAAGGAGGGGTTGGAACCCCATGTGCCGGTTTCGCTTCAGCAGTCGGAG
GACACCGTGCCCCCGCCCATGGCTAACGCCTGA
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Coding sequence (CDS) from alignment at tig00000908_pilon:406370..406852-

>Ggra4032.t1 ID=Ggra4032.t1|Name=Ggra4032.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=483bp|location=Sequence derived from alignment at tig00000908_pilon:406370..406852- (Gracilaria gracilis GNS1m male)
ATGGTTGAGATTGACGCTGACTCTGCGTTCGCGCTGCTTTACGGCCTGGT
GTCGCTGTTCTCGGTTACTACCTTCGGCTACGCGGGCGAATGGTGTGACC
TTAGAACCTCATGTCCCAATCGTGTAAGGGCCATCATAGCCTTTGCAGTC
TTCGTCTTCCTGCTGTCCGCGCTCATGTTCGTCGCCCAACTCATTGGACT
TGCCTTTGTCGAGTCACTTCATCTGTTCATCACTCCCGTCATCTTCATAT
TGAACACCGTCGTTGCCGCGCTCGCCATCTCGCCGCGCACGGAACTACGC
ACTTCGTTTACGTCCCCCGTTGAGATCGCGTGGTGGACAGAGGTGCTGTC
TGTGTTGCTCATCTTCTTGGCGTTTGCTGACAGGAGTGCACCGGCGAAGG
AGAAGGAGGGGTTGGAACCCCATGTGCCGGTTTCGCTTCAGCAGTCGGAG
GACACCGTGCCCCCGCCCATGGCTAACGCCTGA
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