Ggra3871.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3871.t1
Unique NameGgra3871.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length499
Homology
The following BLAST results are available for this feature:
BLAST of Ggra3871.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..392
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 415..498
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 393..414
NoneNo IPR availableTMHMMTMhelixcoord: 392..414

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:2285495..2286991 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3871.t1Ggra3871.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 2285495..2286991 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3871.t1 ID=Ggra3871.t1|Name=Ggra3871.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=499bp
MVIRLAISLTILVLLTPPFVIAEDLKQQPKLSSVPTLSYEEVQDLLTSNE
TACREATANIFKLCHTAKLRDRVKLASLITTCIENSLTTHGYSHISTWDD
DFGLQRVSEAHIETLMSISLPSLKALCDKTELSSPASLAKNSLLYEEVIS
NSSSNVIQTSRVLKSCTAIVGLSTFRENFDELAALLESMLPHVHDITKAS
NTHRSTFEMFSAKMRKKFRIFQSQIETQLGQVESMLKTAKYAYADHRKSV
WEMKPYINKFGSLADIEVRLRKLESETAFNNRASSIAYSEWLTRRGIAPQ
KCFLHVDKPIKNEYCMRGGKRRDHSKGRNSKQGKGCEEGDLLWAFLRKAR
RFYSAQLGRWLSHDGCDSARKKHDAKIKLNKLQKDMEAGLICVYTHNTGV
LMLFILVLAVCVYVRRRMYIMKRELSVRADELIVLFEREFGKQRQARHRK
ESGTDLYDISKRVNELMTLCDYFDALLRSCDGFCKEIERAMNSGMGCR*
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