Ggra3765.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3765.t1
Unique NameGgra3765.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length173
Homology
BLAST of Ggra3765.t1 vs. uniprot
Match: A0A2V3IUH5 (SCP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUH5_9FLOR)

HSP 1 Score: 225 bits (573), Expect = 9.000e-73
Identity = 111/164 (67.68%), Postives = 134/164 (81.71%), Query Frame = 0
Query:    9 RRGVVRLALRHGPQRHLLVPIYYIFSPPRNPHPLPNLRVAQHRLLQLTNHLRRRNSLQSVKFSSSLSHIAQRHSEYQGSKAKATHKGRHGFRLKERLKESKFDFRYAGENVASGQRTVDDAFQSWYRSKGHRRNLLSSRVDLMGLGVSRGWDGRLYWTQLFASR 172
            RR +VRLALRHGPQRH+LVPIY+  SPPR+   LP+   +Q RLLQLTN LR R+ L  V+ S+ LS IA+ HS YQGS+A+++HKGR GF LK+RLKE+ F+FRYA ENVA+GQ TVD+AF++W  SKGH RN+LS RVDLMGLG+S GWDGRLYWTQLFASR
Sbjct:    3 RRALVRLALRHGPQRHVLVPIYFTVSPPRHRQKLPSFSASQARLLQLTNRLRARHRLGPVRISNGLSKIAEMHSRYQGSRARSSHKGRRGFHLKDRLKEAHFEFRYASENVAAGQPTVDEAFRAWKGSKGHLRNMLSPRVDLMGLGLSTGWDGRLYWTQLFASR 166          
BLAST of Ggra3765.t1 vs. uniprot
Match: A3DC59 (Spore coat assembly protein SafA n=2 Tax=Acetivibrio thermocellus TaxID=1515 RepID=A3DC59_ACET2)

HSP 1 Score: 78.2 bits (191), Expect = 1.000e-14
Identity = 43/132 (32.58%), Postives = 76/132 (57.58%), Query Frame = 0
Query:   42 LPNLRVAQHRLLQLTNHLRRRNSLQSVKFSSSLSHIAQRHSEYQGSKAKATHKG-RHGFRLKERLKESKFDFRYAGENVASGQRTVDDAFQSWYRSKGHRRNLLSSRVDLMGLGVSRGWDGRLYWTQLFASR 172
            + +++  ++ +++L N  R +  L ++K +  LS +A+  SE   +K   +H    +G   K  +++    F  AGEN+A GQ+T  D   +W  S GHR N+LS     +G+G+++G +GRLYWTQ+F  +
Sbjct:   75 IDDIKAQENEVIRLVNVERAKKGLPALKANWQLSRVARYKSEDMANKGYFSHTSPTYGSPFKM-MEDFGIKFTAAGENIAMGQQTARDVMNAWMNSPGHRNNILSPSFTKIGVGLAKGPNGRLYWTQMFIKK 205          
BLAST of Ggra3765.t1 vs. uniprot
Match: W2J2S1 (SCP domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2J2S1_PHYPR)

HSP 1 Score: 79.0 bits (193), Expect = 1.220e-14
Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 0
Query:   52 LLQLTNHLRRRNSLQSVKFSSSLSHIAQRHSEYQGSKAKATHKGRHGFRLKERLKESKFDFRYAGENVASGQRTVDDAFQSWYRSKGHRRNLLSSRVDLMGLG--VSRGWDG-RLYWTQLF 169
            +L   N  R +N L  +   + L + A  HS+ Q +  K  H G +G RL +R+K   ++F  A ENVA+GQ++V++   SW+ S GHR NLL+  V+ +G    V+ G      YWTQ F
Sbjct:  133 MLSRINAYRSQNGLPGLSIDNRLVNAAAFHSQDQANNCKMQHAGSNGSRLGDRIKAQGYNFNMAAENVAAGQKSVEEVMNSWWNSPGHRANLLNKNVENVGFAKVVNNGCSNYATYWTQDF 253          
BLAST of Ggra3765.t1 vs. uniprot
Match: CAP domain-containing protein n=1 Tax=Zhaonella formicivorans TaxID=2528593 RepID=UPI0010EA5E86 (CAP domain-containing protein n=1 Tax=Zhaonella formicivorans TaxID=2528593 RepID=UPI0010EA5E86)

HSP 1 Score: 78.6 bits (192), Expect = 1.300e-14
Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 0
Query:   45 LRVAQHRLLQLTNHLRRRNSLQSVKFSSSLSHIAQRHSEYQGSKAKATHKGRHGFRLKERLKESKFDFRYAGENVASGQRTVDDAFQSWYRSKGHRRNLLSSRVDLMGLGVSRGWDGRLYWTQLFASR 172
            L   + +++ L N  R+RN LQ +K    L+ +A+  S     K   +H+        E +K+    ++YAGEN+A+GQ+T +D  ++W  S GHR N+L++    +G+G   G     YWTQLF  R
Sbjct:  112 LNAYEQKVVDLVNAERQRNGLQPLKVDLELAKVARLKSADMRDKNYFSHQSPSYGSPFEMMKQFGISYKYAGENIAAGQKTPEDVVKAWMNSSGHRANILNANYTHIGVGYVNGGSYGSYWTQLFVGR 239          
BLAST of Ggra3765.t1 vs. uniprot
Match: A0A432MEY1 (CAP domain-containing protein n=2 Tax=Tautonia sociabilis TaxID=2080755 RepID=A0A432MEY1_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 7.720e-14
Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 0
Query:   52 LLQLTNHLRRRNSLQSVKFSSSLSHIAQRHSEYQGSKAKATHKGRHGFRLKERLKESKFDFRYAGENVASGQRTVDDAFQSWYRSKGHRRNLLSSRVDLMGLGVSRGWD--GRLYWTQLFAS 171
            LL+  N +R    L  + +S +L+  A+ HS    S  +  HKG  G    +R++   + FR  GEN+ASGQ TV++  + W  S GHRRN+L    D   LG SR  D  GR YW  +FA+
Sbjct:  126 LLERHNAIRTARGLPPLSWSPTLADAAREHSSGLVSLGRLRHKGHDGSSPADRVERRGYAFRSVGENIASGQETVEEVMEGWMNSPGHRRNILG---DFEELGASRREDEGGRPYWCVVFAT 244          
BLAST of Ggra3765.t1 vs. uniprot
Match: A0A0A2T5P4 (SCP domain-containing protein n=3 Tax=Pontibacillus yanchengensis TaxID=462910 RepID=A0A0A2T5P4_9BACI)

HSP 1 Score: 76.6 bits (187), Expect = 1.110e-13
Identity = 39/122 (31.97%), Postives = 67/122 (54.92%), Query Frame = 0
Query:   51 RLLQLTNHLRRRNSLQSVKFSSSLSHIAQRHSEYQGSKAKATHKGRHGFRLKERLKESKFDFRYAGENVASGQRTVDDAFQSWYRSKGHRRNLLSSRVDLMGLGVSRGWDGRLYWTQLFASR 172
            ++++LTN  R +  L  +K    L ++AQ+ SE        +H         E ++    D++ A EN+A+GQ+T +   + W  S GHR+N+L+  V  +G+G+ RG D  +YWTQ+F  +
Sbjct:  153 KVVELTNKEREKKGLSKLKAYPELRNVAQKKSEDMVKNGYFSHNSPTYGSPFEMMQNFGIDYKTAAENIAAGQQTPEKVVEGWMNSAGHRKNILNKNVTHIGIGIERGGDMGIYWTQMFIQK 274          
BLAST of Ggra3765.t1 vs. uniprot
Match: A0A1E3BY34 (LysM domain-containing protein n=3 Tax=Eubacteriales TaxID=186802 RepID=A0A1E3BY34_9CLOT)

HSP 1 Score: 75.1 bits (183), Expect = 1.400e-13
Identity = 44/130 (33.85%), Postives = 75/130 (57.69%), Query Frame = 0
Query:   42 LPNLRVAQHRLLQLTNHLRRRNSLQSVKFSSSLSHIAQRHSEYQGSKAKATHKGRHGFRLKERLKESKFDFRY--AGENVASGQRTVDDAFQSWYRSKGHRRNLLSSRVDLMGLGVSRGWDGRLYWTQLF 169
            + +++  ++ +++L N  R +  L ++K +  LS +A+  S+    K   +H     +    R+ ES F  +Y  AGEN+A GQRT  +   +W  S GHR N+LS     +G+G+++G +GRLYWTQ+F
Sbjct:   72 IDDVKAQENEVIRLVNVERAKKGLPALKANWQLSRVARYKSQDMVDKGYFSHTSP-TYGSPFRMMES-FGIKYTAAGENIAMGQRTASEVMNAWMNSPGHRNNILSPSFSEIGVGLAKGPNGRLYWTQMF 199          
BLAST of Ggra3765.t1 vs. uniprot
Match: A0A023VTT7 (Scp-like extracellular protein (Fragment) n=8 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A023VTT7_PHYNI)

HSP 1 Score: 73.9 bits (180), Expect = 2.560e-13
Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = 0
Query:   52 LLQLTNHLRRRNSLQSVKFSSSLSHIAQRHSEYQGSKAKATHKGRHGFRLKERLKESKFDFRYAGENVASGQRTVDDAFQSWYRSKGHRRNLLSSRVDLMG 152
            +L   N  R +N L  +   + L + A  HS+ Q +  K  H G +G RL +R+K   ++F  A ENVA+GQ++V++   SW+ S GHR NLL+  V+ +G
Sbjct:   78 MLSRINAYRSQNGLPGLSIDNRLVNAAAFHSQDQANNCKMQHAGSNGSRLGDRIKAQGYNFNMAAENVAAGQKSVEEVMNSWWNSPGHRANLLNKNVENVG 178          
BLAST of Ggra3765.t1 vs. uniprot
Match: A0A662XLU6 (SCP domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLU6_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.020e-13
Identity = 44/125 (35.20%), Postives = 68/125 (54.40%), Query Frame = 0
Query:   52 LLQLTNHLRRRNSLQSVKFSSSLSHIAQRHSEYQGSKAKATHKGRHGFRLKERLKESKFDFRYAGENVASGQRTVDDAFQSWYRSKGHRRNLLSSRVDLMGLGVSRGWDGRL-----YWTQLFAS 171
            +L   N  R +N L ++   + L+  A  HS+ Q ++ + TH G +G    +R+K   +D+    ENVA+GQ+TVDD   SW+ S GHR N+L+   DL+ +G +   +        YWTQ F S
Sbjct:  126 MLARLNEYRAQNDLVALTIDNRLTVAAALHSQDQATRCEMTHTGSNGLHSWDRVKAQGYDYSVTAENVAAGQKTVDDVMTSWWNSAGHRANILNG--DLVNVGFALTSNPNCSNYVTYWTQDFGS 248          
BLAST of Ggra3765.t1 vs. uniprot
Match: SafA/ExsA family spore coat assembly protein n=1 Tax=Tuberibacillus sp. Marseille-P3662 TaxID=1965358 RepID=UPI000A1CEF41 (SafA/ExsA family spore coat assembly protein n=1 Tax=Tuberibacillus sp. Marseille-P3662 TaxID=1965358 RepID=UPI000A1CEF41)

HSP 1 Score: 74.3 bits (181), Expect = 3.140e-13
Identity = 38/131 (29.01%), Postives = 74/131 (56.49%), Query Frame = 0
Query:   42 LPNLRVAQHRLLQLTNHLRRRNSLQSVKFSSSLSHIAQRHSEYQGSKAKATHKGRHGFRLKERLKESKFDFRYAGENVASGQRTVDDAFQSWYRSKGHRRNLLSSRVDLMGLGVSRGWDGRLYWTQLFASR 172
            +P+++  + R+++LTN  R++  L+ +K +  +S +A+  +          HK        + +++    F  AGEN+A+GQ T      +W +SKGHR+N+LSS+   +G+G ++G     YW+Q+F ++
Sbjct:   80 IPSIKKFEKRVIELTNQERQKQGLEPLKANWQVSRVARYKARDMRDNNYFEHKSPTYGSPFQMMRDFNISFTAAGENIAAGQSTPQAVVDAWMKSKGHRKNILSSKYTQIGVGYAKGGSYGHYWSQMFITK 210          
The following BLAST results are available for this feature:
BLAST of Ggra3765.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUH59.000e-7367.68SCP domain-containing protein n=1 Tax=Gracilariops... [more]
A3DC591.000e-1432.58Spore coat assembly protein SafA n=2 Tax=Acetivibr... [more]
W2J2S11.220e-1437.19SCP domain-containing protein n=10 Tax=Phytophthor... [more]
CAP domain-containing protein n=1 Tax=Zhaonella formicivorans TaxID=2528593 RepID=UPI0010EA5E861.300e-1433.59CAP domain-containing protein n=1 Tax=Zhaonella fo... [more]
A0A432MEY17.720e-1438.52CAP domain-containing protein n=2 Tax=Tautonia soc... [more]
A0A0A2T5P41.110e-1331.97SCP domain-containing protein n=3 Tax=Pontibacillu... [more]
A0A1E3BY341.400e-1333.85LysM domain-containing protein n=3 Tax=Eubacterial... [more]
A0A023VTT72.560e-1337.62Scp-like extracellular protein (Fragment) n=8 Tax=... [more]
A0A662XLU63.020e-1335.20SCP domain-containing protein n=2 Tax=Nothophytoph... [more]
SafA/ExsA family spore coat assembly protein n=1 Tax=Tuberibacillus sp. Marseille-P3662 TaxID=1965358 RepID=UPI000A1CEF413.140e-1329.01SafA/ExsA family spore coat assembly protein n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014044CAP domainPFAMPF00188CAPcoord: 53..169
e-value: 1.4E-16
score: 61.4
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 34..170
e-value: 6.5E-34
score: 119.9
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 49..170
NoneNo IPR availablePANTHERPTHR31157UNCHARACTERIZEDcoord: 40..171
NoneNo IPR availableCDDcd05379CAP_bacterialcoord: 51..170
e-value: 2.29025E-32
score: 110.162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1450966..1451552 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3765.t1Ggra3765.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 1450966..1451552 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3765.t1 ID=Ggra3765.t1|Name=Ggra3765.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=173bp
MLNPIRAVRRGVVRLALRHGPQRHLLVPIYYIFSPPRNPHPLPNLRVAQH
RLLQLTNHLRRRNSLQSVKFSSSLSHIAQRHSEYQGSKAKATHKGRHGFR
LKERLKESKFDFRYAGENVASGQRTVDDAFQSWYRSKGHRRNLLSSRVDL
MGLGVSRGWDGRLYWTQLFASR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014044CAP_domain
IPR035940CAP_sf