Ggra3669.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3669.t1
Unique NameGgra3669.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length214
Homology
BLAST of Ggra3669.t1 vs. uniprot
Match: A0A2V3IUR2 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUR2_9FLOR)

HSP 1 Score: 400 bits (1027), Expect = 1.550e-140
Identity = 201/212 (94.81%), Postives = 209/212 (98.58%), Query Frame = 0
Query:    1 MDLRGPRPQKKPPAPVPMVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDAMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDLSTIERDTDRDFFMTPEEALEYGIIDEVIQTKRSLPKPPKPVL 212
            M+LRGPRPQ+KPPAPVPMVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDP+KDITLYINSPGGSV+AGLAIFD MQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPN+RIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDL+TIERDTDRDFFM PEEAL+YGIIDEVI TKR+LPKPPKPVL
Sbjct:    1 MELRGPRPQRKPPAPVPMVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPSKDITLYINSPGGSVSAGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDLATIERDTDRDFFMAPEEALDYGIIDEVIPTKRTLPKPPKPVL 212          
BLAST of Ggra3669.t1 vs. uniprot
Match: R7QLF4 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF4_CHOCR)

HSP 1 Score: 384 bits (985), Expect = 2.950e-133
Identity = 194/209 (92.82%), Postives = 202/209 (96.65%), Query Frame = 0
Query:    4 RGPRPQKKPPAPVPMVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDAMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDLSTIERDTDRDFFMTPEEALEYGIIDEVIQTKRSLPKPPKPVL 212
            RGPRPQKKPPAPVPMVTFG+NQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSV+AGLAIFD MQYIPCDVATICFGTAASMGAFLL +G KGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGY++ ATGQDL+ IE DTDRDFFMTPEEALEYGIIDEVIQTKRSLPKP +P+L
Sbjct:   60 RGPRPQKKPPAPVPMVTFGDNQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVSAGLAIFDTMQYIPCDVATICFGTAASMGAFLLGSGTKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYMAYATGQDLNKIEVDTDRDFFMTPEEALEYGIIDEVIQTKRSLPKPARPML 268          
BLAST of Ggra3669.t1 vs. uniprot
Match: M2VV76 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VV76_GALSU)

HSP 1 Score: 329 bits (843), Expect = 2.770e-111
Identity = 162/205 (79.02%), Postives = 184/205 (89.76%), Query Frame = 0
Query:    8 PQKKPPAPVPMVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDAMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDLSTIERDTDRDFFMTPEEALEYGIIDEVIQTKRSLPKPPKPVL 212
            P +KPPAP+P V  G+ QMD+YSRLAKDRILLLGR VDDEVANALVAQMLFL+ +DP+KDITLYINSPGGSV+AGLA++D MQ+IPCDV+T+CFGTAASM AFLL AG KGKRKSLPN+RIMIHQPLGGAQGQAADIEIQA+EILFI+SLLN Y++  TG+ L  IE+DTDRDFFMTPEEALEYG+IDEVIQTK+ L KP KP L
Sbjct:   88 PSRKPPAPIPTVYMGDTQMDIYSRLAKDRILLLGRAVDDEVANALVAQMLFLANEDPSKDITLYINSPGGSVSAGLAVYDTMQFIPCDVSTVCFGTAASMAAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAREILFIKSLLNTYMADYTGKPLEKIEQDTDRDFFMTPEEALEYGMIDEVIQTKKVLAKPQKPAL 292          
BLAST of Ggra3669.t1 vs. uniprot
Match: A0A7S0DXN8 (ATP-dependent Clp protease proteolytic subunit n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0DXN8_9CRYP)

HSP 1 Score: 323 bits (829), Expect = 2.090e-109
Identity = 164/212 (77.36%), Postives = 186/212 (87.74%), Query Frame = 0
Query:    6 PRPQKKPPA----PVPMVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDAMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDLSTIERDTDRDFFMTPEEALEYGIIDEVIQTKRS-LPKPPKPVL 212
            PRP + PPA    P+PMV+ GE QMD+YSRLAKDRILLLG  V+DEVAN LVAQMLFL+ +DP KDIT+YINSPGGSV+AG+AI+D MQYIPCD +T+CFGTAASMGAFLL +GA GKRKSLPN+RIMIHQPLGGAQGQAADIEIQAKEILF++SLLN Y++ ATGQ L  IE DTDRDFFMTPEEA EYGIIDEVIQTK+S LPKP +P+L
Sbjct:   64 PRPGEAPPAKPSIPMPMVSVGEGQMDIYSRLAKDRILLLGTDVNDEVANNLVAQMLFLANEDPGKDITIYINSPGGSVSAGMAIYDTMQYIPCDASTVCFGTAASMGAFLLCSGAPGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKSLLNSYMADATGQPLDKIEEDTDRDFFMTPEEAKEYGIIDEVIQTKKSNLPKPSRPIL 275          
BLAST of Ggra3669.t1 vs. uniprot
Match: A0A5J4YL26 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL26_PORPP)

HSP 1 Score: 317 bits (813), Expect = 4.310e-107
Identity = 160/193 (82.90%), Postives = 176/193 (91.19%), Query Frame = 0
Query:   11 KPPAPVPMVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDAMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDLSTIERDTDRDFFMTPEEALEYGIIDEVIQTKRS 203
            K P P+PMV  GE QMDV+SRLAKDRILLLGRQVDDEVANALVAQML+L+ADDP+KDITLYINSPGGSV+AGLAI+D MQYIPCDV TICFGTAASMGAFLL AGAKGKRKSLPN+RIMIHQPLGGAQGQAADIEIQAKEIL+I+ +LN Y+S  TG++L  IE+DTDRDFFMTP EA EYGIIDEVI+TK S
Sbjct:   64 KAPFPMPMVAMGEGQMDVFSRLAKDRILLLGRQVDDEVANALVAQMLYLAADDPSKDITLYINSPGGSVSAGLAIYDTMQYIPCDVQTICFGTAASMGAFLLGAGAKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILWIKEVLNMYMSEYTGKELQQIEKDTDRDFFMTPAEAKEYGIIDEVIETKVS 256          
BLAST of Ggra3669.t1 vs. uniprot
Match: A0A2V3J5N2 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N2_9FLOR)

HSP 1 Score: 310 bits (795), Expect = 2.200e-104
Identity = 157/201 (78.11%), Postives = 177/201 (88.06%), Query Frame = 0
Query:   13 PAPVPMVTFGEN-QMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDAMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDLSTIERDTDRDFFMTPEEALEYGIIDEVIQTKRSLPKPPKPVL 212
            P PVPMV  G+N QMD+YSRLAKDRILLLGR VDDEVAN+LVAQMLFL+++DP KDIT+YINSPGGSV+AGLAI+D MQ+IPCDV TICFGTAASMGAFLL AG KGKRKSLPN+RIMIHQPLGGAQGQAADIEIQAKEILF+++LLNGY+S  TGQ L  IE DTDRDFFMT  +A+EYGIIDEVI+TK  +P   +P L
Sbjct:   65 PPPVPMVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDPEKDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMSDFTGQPLDKIETDTDRDFFMTAIDAMEYGIIDEVIKTKVDVPVLKRPTL 265          
BLAST of Ggra3669.t1 vs. uniprot
Match: A0A835YSZ8 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ8_9STRA)

HSP 1 Score: 311 bits (797), Expect = 2.460e-104
Identity = 155/208 (74.52%), Postives = 181/208 (87.02%), Query Frame = 0
Query:    7 RPQKKPPAPVPMVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDAMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDLSTIERDTDRDFFMTPEEALEYGIIDEVIQTKRS-LPKPPKPVLQ 213
            +P + PP  +P+V  G  QMDV SRL KDRILLLG+QV+DEVAN LVAQ+L+L+++DP+KDITLYINSPGGSV+AG+AI+D MQY+PCDV+T+CFGTAASMGAFLL AGAKGKR+SLPN+RIMIHQPLGGAQGQAADIEIQAKEILFIRSLLN Y++  TGQ +  I+ D DRDFFMTPEEA EYGIIDEVI TK S +PKPP P L+
Sbjct:   80 KPSEIPPVRMPVVDVGGGQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLASEDPSKDITLYINSPGGSVSAGMAIYDTMQYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYIADYTGQPIEKIQEDCDRDFFMTPEEAAEYGIIDEVITTKTSSIPKPPMPSLE 287          
BLAST of Ggra3669.t1 vs. uniprot
Match: A0A1X6P0G7 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0G7_PORUM)

HSP 1 Score: 308 bits (788), Expect = 2.730e-103
Identity = 149/203 (73.40%), Postives = 176/203 (86.70%), Query Frame = 0
Query:    5 GPRPQKKPPAPVPMVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDAMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDLSTIERDTDRDFFMTPEEALEYGIIDEVIQTKRSLPKP 207
            G  P++  P P+PMV  G+ QMD+YSRLAKDRIL+LG  VDD VAN LVAQMLFL+++DP KDITL+INSPGGS++AGLAIFD MQ++PCD+ TICFGTAASMGAFLL AG KGKRKSLPN+RIMIHQPLGGAQGQAADIEIQA EILF+R LLN Y++G TG  +  IE+DTDRD+FMTPE+A+EYG+ID+VI+TK  LPKP
Sbjct:   60 GTEPKRSAPPPMPMVAVGDGQMDIYSRLAKDRILVLGAAVDDTVANQLVAQMLFLASEDPDKDITLWINSPGGSISAGLAIFDTMQFVPCDIQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAGEILFMRGLLNSYMAGYTGVAVEKIEKDTDRDYFMTPEDAVEYGLIDDVIKTKVMLPKP 262          
BLAST of Ggra3669.t1 vs. uniprot
Match: A0A7S1TTI2 (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTI2_9STRA)

HSP 1 Score: 306 bits (784), Expect = 2.840e-102
Identity = 153/216 (70.83%), Postives = 183/216 (84.72%), Query Frame = 0
Query:    1 MDLRGPRPQKKPPAPV--PMVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDAMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDLSTIERDTDRDFFMTPEEALEYGIIDEVIQTKRS-LPKPPKPVLQ 213
            +D R P P +K   PV  P+V  G+ QMDV SRL KDR+LLLG+QV+D+VAN LVAQ+L+L+++DP KDITLYINSPGGSV+AG+AIFD MQY+PCDV+T+CFG AASMGAFLL AGAKGKR++LPNSRIMIHQPLGGAQGQAAD+EIQAKEIL+IR +LN Y++  TGQ  S IE D DRDFF++PEEA EYG+IDEV+ TK S LPKPP PVL+
Sbjct:   76 VDPRRPDPDRKTNIPVRMPVVDVGDGQMDVVSRLLKDRVLLLGQQVNDDVANVLVAQLLYLASEDPDKDITLYINSPGGSVSAGMAIFDTMQYVPCDVSTVCFGMAASMGAFLLGAGAKGKRRALPNSRIMIHQPLGGAQGQAADVEIQAKEILYIREILNSYMAAFTGQPSSKIETDCDRDFFLSPEEACEYGLIDEVVTTKTSHLPKPPMPVLE 291          
BLAST of Ggra3669.t1 vs. uniprot
Match: A0A7S3NLA1 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLA1_9STRA)

HSP 1 Score: 304 bits (779), Expect = 5.570e-102
Identity = 152/210 (72.38%), Postives = 180/210 (85.71%), Query Frame = 0
Query:    4 RGPRPQKKPPAPVPMVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDAMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDLSTIERDTDRDFFMTPEEALEYGIIDEVIQTKRS-LPKPPKPVL 212
            R P  +  PP  +P+V  G+ QMDV SRL KDRILLLG+QV+DEVAN LVAQ+L+L+ +DPTKDITLY+NSPGGSV+AG+AI+DAMQ++PCDVAT+CFGTAASMGAFLL AGA+GKR++LPN+RIMIHQPLGGAQGQAADIEIQAKEILF+R  LN ++S  TGQ +S +E D DRDFFMTPEEAL+YG+ID VIQTK S L KPP P L
Sbjct:   53 RDPDTKPVPPVRMPVVDSGDGQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANEDPTKDITLYVNSPGGSVSAGMAIYDAMQFVPCDVATVCFGTAASMGAFLLGAGARGKRRALPNARIMIHQPLGGAQGQAADIEIQAKEILFVRQQLNTFISEYTGQPISKVEEDCDRDFFMTPEEALDYGLIDSVIQTKTSHLAKPPMPSL 262          
The following BLAST results are available for this feature:
BLAST of Ggra3669.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUR21.550e-14094.81ATP-dependent Clp protease proteolytic subunit n=1... [more]
R7QLF42.950e-13392.82ATP-dependent Clp protease proteolytic subunit n=1... [more]
M2VV762.770e-11179.02ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S0DXN82.090e-10977.36ATP-dependent Clp protease proteolytic subunit n=3... [more]
A0A5J4YL264.310e-10782.90ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A2V3J5N22.200e-10478.11ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A835YSZ82.460e-10474.52ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A1X6P0G72.730e-10373.40ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S1TTI22.840e-10270.83ATP-dependent Clp protease proteolytic subunit n=2... [more]
A0A7S3NLA15.570e-10272.38ATP-dependent Clp protease proteolytic subunit n=1... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 119..138
score: 63.38
coord: 67..87
score: 65.83
coord: 176..195
score: 57.5
coord: 27..42
score: 47.97
coord: 98..115
score: 67.36
IPR001907ATP-dependent Clp protease proteolytic subunitHAMAPMF_00444ClpPcoord: 15..201
score: 40.477398
IPR001907ATP-dependent Clp protease proteolytic subunitCDDcd07017S14_ClpP_2coord: 27..197
e-value: 6.53906E-109
score: 307.831
NoneNo IPR availableGENE3D3.90.226.10coord: 7..203
e-value: 1.5E-78
score: 265.1
NoneNo IPR availablePANTHERPTHR10381:SF24ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 4, CHLOROPLASTICcoord: 23..204
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 23..200
e-value: 1.0E-78
score: 263.4
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 23..204
IPR018215ClpP, Ser active sitePROSITEPS00381CLP_PROTEASE_SERcoord: 98..109
IPR033135ClpP, histidine active sitePROSITEPS00382CLP_PROTEASE_HIScoord: 120..133
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 21..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1043177..1043818 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3669.t1Ggra3669.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 1043177..1043818 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3669.t1 ID=Ggra3669.t1|Name=Ggra3669.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=214bp
MDLRGPRPQKKPPAPVPMVTFGENQMDVYSRLAKDRILLLGRQVDDEVAN
ALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDAMQYIPCDVATIC
FGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKE
ILFIRSLLNGYLSGATGQDLSTIERDTDRDFFMTPEEALEYGIIDEVIQT
KRSLPKPPKPVLQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR023562ClpP/TepA
IPR018215ClpP_Ser_AS
IPR033135ClpP_His_AS
IPR029045ClpP/crotonase-like_dom_sf