Ggra3596.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra3596.t1
Unique Name	Ggra3596.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	294

Homology

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BLAST of Ggra3596.t1 vs. uniprot
Match: A0A2V3IC68 (Acyl-CoA-binding domain-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC68_9FLOR)

HSP 1 Score: 263 bits (673), Expect = 6.010e-84
Identity = 171/287 (59.58%), Postives = 214/287 (74.56%), Query Frame = 0

Query:    7 AAFEKAAQFISSGKLTNVSQEEQLELYGLYSVVKKGIAPNQGPSAFLDPTGFAKWTAWHASSHLDREEAMNEYIQLVANLRSTAASKSSVLKHGSGFGNKASAGFDVSPENEEDSAEHFDICYWAAVGNMSAVVQCLRTQGVSPDYKDQDGLTPLMRAVDRNEFQVVDILVEAGADIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHGVDALTPASDETRTIVDEVRQGKWKRKTKPLSQGRLLFSAYIPNMTNTSKQLFLASVVIGIVAAAYYRLRK 293
            ++FE AA F+SSGKL ++SQ+EQLELYGLYSVV+KG APN+ PSA LDPTGFAKWTAW   SHL++E+AM EYI+LV++L +++  K+S     +GFGNK S GFD+  +NEE S    DICY+A +G+ ++V++CL+ Q VSP+Y+DQDGLTPLMRAVDRNE  VVDILV AGAD+     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     AL  ASDET+  ++EV+QG WKRK+   + GR  FS + P     + Q+  AS  I +    YY LR+
Sbjct:   24 SSFEDAADFVSSGKLGSISQDEQLELYGLYSVVRKGSAPNKAPSALLDPTGFAKWTAWQTYSHLEKEDAMKEYIELVSSLLASSRPKTSSSTQSTGFGNKGSGGFDIQADNEELSNNELDICYYATMGDKASVIRCLKKQRVSPNYRDQDGLTPLMRAVDRNEMHVVDILVAAGADLNAVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGALGIASDETKRAIEEVQQGTWKRKSPQFNVGRWWFSYFSPVHFEFNTQVLAASAFITVGIILYYHLRQ 310

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BLAST of Ggra3596.t1 vs. uniprot
Match: A0A1S2YDQ0 (acyl-CoA-binding domain-containing protein 1 isoform X1 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YDQ0_CICAR)

HSP 1 Score: 85.1 bits (209), Expect = 3.360e-15
Identity = 64/192 (33.33%), Postives = 95/192 (49.48%), Query Frame = 0

Query:    4 ETEAAFEKAAQFISSGKLTNVSQ----EEQLELYGLYSVVKKGIAPNQGPSAFLDPTGFAKWTAWHASSHLDREEAMNEYIQLVANLRSTAASKSSVL-KHGSGFGNKASAGFDVSP-------ENEEDSAEHFDICY-WAAVGNMSAVVQCLRTQGVSPDYKDQDGLTPLMRAVDRNEFQVVDILVEAGAD 182
            E + AF  A  F+++     +SQ    + QL+LYGLY +  +G      PS  L  T  AKW AW     +  E+AM +YI +V+ L  T    SS+  K G G G  + A   + P       E E  +    D  + +A  G+M+ +++C+   GVS + KD +G TPL  AVDR    V ++L+   AD
Sbjct:  108 ELDEAFSAATAFVAAAAADRLSQKVSNDVQLQLYGLYKIATEGPCSTPQPSP-LKMTARAKWQAWQKLGAMPPEDAMQKYIDVVSELYPTWLDGSSLRSKTGDGGGPSSEARGPMGPVFSSFVYEEECGNDSKMDAIHGFAREGDMANLLKCIEN-GVSVNLKDSEGRTPLHWAVDRGHLNVTELLIGRSAD 297

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BLAST of Ggra3596.t1 vs. uniprot
Match: A0A6P6AFI6 (acyl-CoA-binding domain-containing protein 1-like isoform X1 n=2 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6AFI6_DURZI)

HSP 1 Score: 85.1 bits (209), Expect = 3.420e-15
Identity = 66/200 (33.00%), Postives = 98/200 (49.00%), Query Frame = 0

Query:    4 ETEAAFEKAAQFISSGKLTNVSQ----EEQLELYGLYSVVKKGIAPNQGPSAFLDPTGFAKWTAWHASSHLDREEAMNEYIQLVANLRSTAASKSSVLKHGSGFGNKASAGFDVSPE-----NEEDSAEHFD---ICYWAAVGNMSAVVQCLRTQGVSPDYK--------DQDGLTPLMRAVDRNEFQVVDILVEAGADI 183
            E + AF  A  F+++     +SQ    E QL+LYGLY +  +G      PSA L  T  AKW AWH    +  EEAM +YI +V+ L  T A+ S++ K G+    + +A   + P       EE S        I  +A  G +  +++C+ + GVS   +        D +G TPL  AVDR  F++ + LV   AD+
Sbjct:  104 ELDGAFSAATTFVAAAAADRLSQKVSNEVQLQLYGLYKIATEGPCTAPQPSA-LKMTARAKWQAWHKLGAMPPEEAMQKYIDIVSELYPTWAAGSAMSKLGADNAARKNAKGPMGPVFSSFVYEEGSGNELKMDAIHAFAREGELDNLLKCIES-GVSVHLQGCLLMMLADSEGRTPLHWAVDRGHFKITEALVSRNADV 301

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BLAST of Ggra3596.t1 vs. uniprot
Match: acyl-CoA-binding domain-containing protein 1-like n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D6290D7 (acyl-CoA-binding domain-containing protein 1-like n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D6290D7)

HSP 1 Score: 84.7 bits (208), Expect = 4.170e-15
Identity = 61/187 (32.62%), Postives = 90/187 (48.13%), Query Frame = 0

Query:    4 ETEAAFEKAAQFISSGKLTN----VSQEEQLELYGLYSVVKKGIAPNQGPSAFLDPTGFAKWTAWHASSHLDREEAMNEYIQLVANLRSTAASKSSVLKHGSGFGNKA---SAGFDVSPENEEDSAEHFDICY-WAAVGNMSAVVQCLRTQGVSPDYKDQDGLTPLMRAVDRNEFQVVDILVEAGAD 182
            E + AF  A  F+++         VS + QL+LYGLY +  +G      PSA +  T  AKW AWH    +  EEAM +YI+++  L  T A  S+  + G  + N A      F      E  +    D  + +A  G+   +++C+   GVS D KD +G T L  AVDR    V + L++  AD
Sbjct:  104 ELDEAFSAATAFVAATAADRSSQKVSNDLQLQLYGLYKIATEGPCGVPQPSA-IKMTARAKWNAWHKLGAMSPEEAMQKYIEIITELYPTWADGSTSKRRGVNYSNDAPPMGPVFSTFMHEESGNELKLDAIHAFAREGDTENLLKCVHG-GVSVDTKDSEGRTALHWAVDRGHIDVAEFLLDMNAD 288

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BLAST of Ggra3596.t1 vs. uniprot
Match: I3SFA2 (ACB domain-containing protein n=6 Tax=Trifolieae TaxID=163742 RepID=I3SFA2_MEDTR)

HSP 1 Score: 84.3 bits (207), Expect = 6.110e-15
Identity = 64/192 (33.33%), Postives = 95/192 (49.48%), Query Frame = 0

Query:    4 ETEAAFEKAAQFISSGKLTNVSQ----EEQLELYGLYSVVKKGIAPNQGPSAFLDPTGFAKWTAWHASSHLDREEAMNEYIQLVANLRSTAASKSSVL-KHGSGFGNKASAGFDVSP-------ENEEDSAEHFDICY-WAAVGNMSAVVQCLRTQGVSPDYKDQDGLTPLMRAVDRNEFQVVDILVEAGAD 182
            E + AF  A  F+++     +SQ    + QL+LYGLY +  +G      PS  L  T  AKW AW     +  E+AM +YI +V+ L  T    + +  K G G G  + A   + P       E E  S    D  + +A  G+M+ +++C+ + GVS + KD +G TPL  AVDR    V ++LV   AD
Sbjct:  106 ELDEAFSAATAFVAAAAADRLSQKVSNDVQLQLYGLYKIATEGPCSTAQPSP-LKMTARAKWQAWRKLGAMPPEDAMQKYIDIVSELYPTWLDGAPLRSKTGDGGGPSSEARGPMGPVFSSFVYEEECGSDSKMDAIHGFAREGDMTNLLKCIES-GVSVNLKDSEGRTPLHWAVDRGHLNVTELLVGKNAD 295

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BLAST of Ggra3596.t1 vs. uniprot
Match: A0A4P1QXI1 (ACB domain-containing protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A4P1QXI1_LUPAN)

HSP 1 Score: 84.3 bits (207), Expect = 6.160e-15
Identity = 65/192 (33.85%), Postives = 94/192 (48.96%), Query Frame = 0

Query:    4 ETEAAFEKAAQFISSGKLTNVSQ----EEQLELYGLYSVVKKGIAPNQGPSAFLDPTGFAKWTAWHASSHLDREEAMNEYIQLVANLRSTAASKSSVL-KHGSGFGNKASAGFDVSP-------ENEEDSAEHFDICY-WAAVGNMSAVVQCLRTQGVSPDYKDQDGLTPLMRAVDRNEFQVVDILVEAGAD 182
            E + AF  A  FI++     +SQ    E QL+LYGLY +  +G      PS  L  T  AKW AW     +  E+AM +YI +V  L  +    SS+  K G G G+ + A   + P       E +  S    D  + +A  G+ + ++ C+   GVS + KD +G TPL  AVDR  F V ++LV   A+
Sbjct:  106 ELDEAFSAATAFIAASAADRLSQKVSNEVQLQLYGLYKIATEGPCSTPQPSP-LKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTELYPSWLDGSSLKSKSGDGGGSSSDAKGPMGPVFSTFVYEEDYGSDLKMDAIHGFAREGDKANLLNCIEN-GVSVNLKDSEGRTPLHWAVDRGHFDVTELLVGRDAE 295

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BLAST of Ggra3596.t1 vs. uniprot
Match: A0A3Q7FMV6 (ACB domain-containing protein n=6 Tax=Solanum TaxID=4107 RepID=A0A3Q7FMV6_SOLLC)

HSP 1 Score: 84.0 bits (206), Expect = 7.370e-15
Identity = 62/191 (32.46%), Postives = 93/191 (48.69%), Query Frame = 0

Query:    4 ETEAAFEKAAQFI---SSGKLTNVSQEEQLELYGLYSVVKKGIAPNQGPSAFLDPTGFAKWTAWHASSHLDREEAMNEYIQLVANLRSTAASKSSVLKHGSGFGNKASAGFDVSPE-----NEEDSAEHF---DICYWAAVGNMSAVVQCLRTQGVSPDYKDQDGLTPLMRAVDRNEFQVVDILVEAGADI 183
            E + AF  A  F+   ++ +   VS E QL+LYGLY +  +G      PSA L  T  AKW AW     +  EEAM +Y+ +V  L  +    S+  +  SG  N  + G  + P      +EEDS       +I  +A  G+   +++C+ + GV  D KD +G  PL  AVDR    +  +L+   AD+
Sbjct:   94 ELDEAFSAATAFVVATAADRSHKVSNEVQLQLYGLYKIATEGPCTAPQPSA-LKMTARAKWQAWQKLGAMPPEEAMEKYLDIVTELFPSWLDGSANGEESSGAHNADTRGRPMGPVFSTFISEEDSENELKLDEIHAFAREGDDENLLKCIES-GVPVDVKDSEGRAPLHWAVDRGHLNITKLLLSRNADV 282

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BLAST of Ggra3596.t1 vs. uniprot
Match: A0A6I9SZR7 (acyl-CoA-binding domain-containing protein 1 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9SZR7_SESIN)

HSP 1 Score: 83.6 bits (205), Expect = 1.070e-14
Identity = 63/194 (32.47%), Postives = 92/194 (47.42%), Query Frame = 0

Query:    4 ETEAAFEKAAQFISSGKLTN----VSQEEQLELYGLYSVVKKGIAPNQGPSAFLDPTGFAKWTAWHASSHLDREEAMNEYIQLVANLRSTAASKSSVLKHGSGFGNKASAG--------FDVSPENEEDSAE-HFDICY-WAAVGNMSAVVQCLRTQGVSPDYKDQDGLTPLMRAVDRNEFQVVDILVEAGADI 183
            E +  F  A  F+++  +      VS + QL+LYGLY +  +G      PSA L  T  AKW AWH    +  EEAM +YI +V  L  T A+ S   K      +  +AG        F      EE  +E   D  + +A  G+   +++C+ + GV  D KD +G TPL  AVDR    +  +L+   AD+
Sbjct:   97 ELDETFSAATAFVAATAVDRAALKVSNDVQLQLYGLYKIATEGPCSAPQPSA-LKMTARAKWQAWHKLGAMPPEEAMEKYIDIVTELYPTWAAGSGTKKEDERSSDAPNAGSKGPMGPVFSSFMYEEESGSELKLDAVHAFAREGDEEKLLKCIES-GVPLDLKDSEGRTPLHWAVDRGHMNITALLLNKNADV 288

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BLAST of Ggra3596.t1 vs. uniprot
Match: M5X1P9 (ACB domain-containing protein n=10 Tax=Prunus TaxID=3754 RepID=M5X1P9_PRUPE)

HSP 1 Score: 83.6 bits (205), Expect = 1.080e-14
Identity = 63/190 (33.16%), Postives = 91/190 (47.89%), Query Frame = 0

Query:    4 ETEAAFEKAAQFISSGKLTN--VSQEEQLELYGLYSVVKKGIAPNQGPSAFLDPTGFAKWTAWHASSHLDREEAMNEYIQLVANLRSTAASKSSVLKHGSGFGNKASAGFD----------VSPENEEDSAEHFDICYWAAVGNMSAVVQCLRTQGVSPDYKDQDGLTPLMRAVDRNEFQVVDILVEAGA 181
            E +  F  A  F++S       VS + QL+LYGLY +  +G      PSA L  T  AKW AW     +  E+AM +YI +V  L  T A+  +V   G G GN      +          V  E  E+ ++   I  +A  G +  +++C+ + GVS D KD +G TPL  AVDR    + ++LV   A
Sbjct:  104 ELDELFSAATAFVASAATDRQKVSNDAQLQLYGLYKIATEGPCSVPQPSA-LKMTARAKWQAWQKLGAMPPEDAMEKYIDIVTELYPTWAAGLTVKSRG-GDGNAPGTDSNGPMGPVFSTFVYEEESENDSKMDAIHAFAREGEVDNLLKCIES-GVSVDLKDSEGRTPLHWAVDRGHLNMAELLVSKNA 290

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BLAST of Ggra3596.t1 vs. uniprot
Match: A0A1J7IJY0 (ACB domain-containing protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A1J7IJY0_LUPAN)

HSP 1 Score: 83.6 bits (205), Expect = 1.160e-14
Identity = 63/192 (32.81%), Postives = 95/192 (49.48%), Query Frame = 0

Query:    4 ETEAAFEKAAQFISSGKLTNVSQ----EEQLELYGLYSVVKKGIAPNQGPSAFLDPTGFAKWTAWHASSHLDREEAMNEYIQLVANLRSTAASKSSVL-KHGSGFGNKASAGFDVSP-------ENEEDSAEHFDICY-WAAVGNMSAVVQCLRTQGVSPDYKDQDGLTPLMRAVDRNEFQVVDILVEAGAD 182
            E +  F  A  F+++     +SQ    + QL+LYGLY +  +G      PS  L  T  AKW AW     +  E+AM +YI +V+ L  +    SS+  K G G G+ + A   + P       E +  S    D  + +A  G+M+ +++C+   GVS + KD +G TPL  AVDR    V ++LV   AD
Sbjct:  107 ELDEVFSAATAFVAASAADRLSQKVSNDMQLQLYGLYKIATEGPCSTPQPSP-LKMTARAKWQAWQKLGAMPPEDAMQKYIDIVSELYPSWLDGSSLKSKSGDGGGSSSEAKGPMGPVFSTFVYEEDYGSDLKMDAIHGFAREGDMANLLKCIEN-GVSVNLKDSEGRTPLHWAVDRGHLDVTELLVGRDAD 296

The following BLAST results are available for this feature:

BLAST of Ggra3596.t1 vs. uniprot

BLAST of Ggra3596.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IC68	6.010e-84	59.58	Acyl-CoA-binding domain-containing protein 1 n=1 T...	[more]
A0A1S2YDQ0	3.360e-15	33.33	acyl-CoA-binding domain-containing protein 1 isofo...	[more]
A0A6P6AFI6	3.420e-15	33.00	acyl-CoA-binding domain-containing protein 1-like ...	[more]
acyl-CoA-binding domain-containing protein 1-like n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D6290D7	4.170e-15	32.62	acyl-CoA-binding domain-containing protein 1-like ...	[more]
I3SFA2	6.110e-15	33.33	ACB domain-containing protein n=6 Tax=Trifolieae T...	[more]
A0A4P1QXI1	6.160e-15	33.85	ACB domain-containing protein n=2 Tax=Lupinus TaxI...	[more]
A0A3Q7FMV6	7.370e-15	32.46	ACB domain-containing protein n=6 Tax=Solanum TaxI...	[more]
A0A6I9SZR7	1.070e-14	32.47	acyl-CoA-binding domain-containing protein 1 n=1 T...	[more]
M5X1P9	1.080e-14	33.16	ACB domain-containing protein n=10 Tax=Prunus TaxI...	[more]
A0A1J7IJY0	1.160e-14	32.81	ACB domain-containing protein n=2 Tax=Lupinus TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000582	Acyl-CoA-binding protein, ACBP	PRINTS	PR00689	ACOABINDINGP	coord: 48..63 score: 33.63 coord: 69..86 score: 37.3 coord: 6..21 score: 27.98 coord: 24..42 score: 37.59
IPR000582	Acyl-CoA-binding protein, ACBP	PFAM	PF00887	ACBP	coord: 6..83 e-value: 3.2E-18 score: 65.9
IPR000582	Acyl-CoA-binding protein, ACBP	PROSITE	PS51228	ACB_2	coord: 5..92 score: 19.298765
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 123..152 e-value: 900.0 score: 5.3 coord: 156..185 e-value: 7.9E-4 score: 28.7 coord: 189..220 e-value: 9.1E-6 score: 35.2
IPR002110	Ankyrin repeat	PFAM	PF12796	Ank_2	coord: 130..220 e-value: 1.5E-13 score: 51.1
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 156..188 score: 13.971499
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 189..221 score: 12.68942
IPR014352	FERM/acyl-CoA-binding protein superfamily	GENE3D	1.20.80.10		coord: 1..102 e-value: 1.7E-21 score: 77.8
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 112..257 e-value: 1.1E-30 score: 108.4
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 53..231
None	No IPR available	PANTHER	PTHR24119	ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6	coord: 3..223
None	No IPR available	PANTHER	PTHR24119:SF0	ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6	coord: 3..223
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 274..291
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 292..293
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..273
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 156..188 score: 12.593679
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 189..220 score: 11.612019
None	No IPR available	TMHMM	TMhelix		coord: 274..291

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000850_pilon	contig	tig00000850_pilon:206025..206906 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra3596.t1	Ggra3596.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000850_pilon 206025..206906 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra3596.t1 ID=Ggra3596.t1|Name=Ggra3596.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=294bp
MADETEAAFEKAAQFISSGKLTNVSQEEQLELYGLYSVVKKGIAPNQGPS
AFLDPTGFAKWTAWHASSHLDREEAMNEYIQLVANLRSTAASKSSVLKHG
SGFGNKASAGFDVSPENEEDSAEHFDICYWAAVGNMSAVVQCLRTQGVSP
DYKDQDGLTPLMRAVDRNEFQVVDILVEAGADINAVDEEGQTALHYAVYC
DHSEMVGLLLSYGARTDINDMHGVDALTPASDETRTIVDEVRQGKWKRKT
KPLSQGRLLFSAYIPNMTNTSKQLFLASVVIGIVAAAYYRLRK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000582	Acyl-CoA-binding_protein
IPR002110	Ankyrin_rpt
IPR014352	FERM/acyl-CoA-bd_prot_sf
IPR036770	Ankyrin_rpt-contain_sf