Ggra3592.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3592.t1
Unique NameGgra3592.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length213
Homology
BLAST of Ggra3592.t1 vs. uniprot
Match: A0A2V3ICD6 (Protein HHL1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICD6_9FLOR)

HSP 1 Score: 301 bits (771), Expect = 1.390e-101
Identity = 151/209 (72.25%), Postives = 176/209 (84.21%), Query Frame = 0
Query:    5 TQMQPAFSNAVSFRPAIRPVHSTSLRCPISPVRQTNP-TPATVQPLRRTPHMRKGPRSRQPVQQSRRPDSAPSLPEDGTPVFAIFVRSQRAKLWYPLGAVQGDDRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDRERFLQNALRMYPQLKRSQSSLEFGYKVAAIGLDERKIKLVEPDMALPFPAWVKKRVESAFKSLTSPGGES 212
            T  QPAF+N +S RPA++ ++S+SLRCP  P++Q    TP      RR P MRKGPRSRQP+QQ R+P +APSLPEDGTPVFAIFVRSQRAKLWYPLGAVQGD+RSK+LV+ALKGGF +GMYENALDKGIAQT+YGKD +RF+QNALRMYPQLK+SQ+ LEFGYKVAA GLDER+IKLV  DMALPF AW KK+VE+AFKS + P  ES
Sbjct:    2 TSPQPAFANTLSLRPAVQSINSSSLRCPAVPIKQNAAETPQLTPSTRRPPQMRKGPRSRQPLQQPRQPGAAPSLPEDGTPVFAIFVRSQRAKLWYPLGAVQGDERSKTLVNALKGGFGRGMYENALDKGIAQTIYGKDSDRFMQNALRMYPQLKKSQNMLEFGYKVAAKGLDERQIKLVSQDMALPFAAWAKKKVENAFKSFSQPKNES 210          
BLAST of Ggra3592.t1 vs. uniprot
Match: R7QNR7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNR7_CHOCR)

HSP 1 Score: 171 bits (432), Expect = 1.270e-49
Identity = 92/161 (57.14%), Postives = 111/161 (68.94%), Query Frame = 0
Query:   43 PATVQPLRRTPHMRKGPRSRQPVQQSRRPDSAPSLPEDGTPVFAIFVRSQRAKLWYPLGAVQGDDRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDRERFLQNALRMYPQLKRSQSSLEFGYKVAAIGLDERKIKLVEPDMALPFPAWVKKRVESAFK 203
            PA  +P      M+KG RSRQP+Q  R  D   SLPEDGTPVFAIFVR+ R KLWYP+GAVQGDDRSK+LV+ALKGGFAK MY                  +F+Q+A+RMYPQLK+    LEFGY+V AIGLDE+  KLV  +MALPF  W KK++++ FK
Sbjct:   88 PARARPTYTPIQMKKG-RSRQPLQPRRAQDQM-SLPEDGTPVFAIFVRTPRTKLWYPMGAVQGDDRSKNLVNALKGGFAKAMYAXXXXXXXXXXXXXXXXXKFVQSAVRMYPQLKKYTKQLEFGYRVTAIGLDEQPTKLVTKEMALPFVEWAKKQLDNVFK 246          
BLAST of Ggra3592.t1 vs. uniprot
Match: A0A7S0T7K4 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7K4_9RHOD)

HSP 1 Score: 148 bits (374), Expect = 1.100e-41
Identity = 72/142 (50.70%), Postives = 97/142 (68.31%), Query Frame = 0
Query:   57 KGPRSRQPVQQSRRPDSAPSLPEDGTPVFAIFVRSQRAKLWYPLGAVQGDDRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDRERFLQNALRMYPQLKRSQSSLEFGYKVAAIGLDERKIKLVEPDMALPFPAWVKKRV 198
            KG R R P  Q +     P LPEDGTPVFAIF R+QRAKLWYP+G V GD +SK+LV A+K G+ + +Y  ALDKGIAQ V+G D  +FL+N ++ +PQLK+ ++ LEFGYKV +  + +     +E + ALPF  W K ++
Sbjct:   42 KGARMRSPQGQGQAGQGMPPLPEDGTPVFAIFARTQRAKLWYPVGMVGGDGKSKTLVGAMKTGWGRRLYRGALDKGIAQVVFGPDSAKFLENGMKQFPQLKKYRNELEFGYKVLSTEITDWPTTKIEKEQALPFFEWAKLKL 183          
BLAST of Ggra3592.t1 vs. uniprot
Match: A0A6T6MJ05 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6MJ05_9RHOD)

HSP 1 Score: 145 bits (367), Expect = 5.740e-41
Identity = 68/133 (51.13%), Postives = 98/133 (73.68%), Query Frame = 0
Query:   75 PSLPEDGTPVFAIFVRSQR-AKLWYPLGAVQGDDRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDRERFLQNALRMYPQLKRSQSSLEFGYKVAAIGLDERKIKLVEPDMALPFPAWVKKRVESAFKSLT 206
            P +P+DGTPVF I VRS + AKLWYP GAVQGD R+K LV+ ++  + K +Y +ALD+GIA TVY KD  RF +NA+RM+P L+ S ++L+FGY+++A G++  K KL+  +M +PF  W++ +V S F+ LT
Sbjct:   22 PEIPDDGTPVFTILVRSDKGAKLWYPCGAVQGDKRAKGLVEGMQSSWGKALYGSALDRGIAGTVY-KDGSRFAENAVRMFPALRSSMNNLQFGYRISAAGMETTKTKLITEEMGMPFLKWIQYKVSSQFEELT 153          
BLAST of Ggra3592.t1 vs. uniprot
Match: A0A5J4Z721 (Protein HHL1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z721_PORPP)

HSP 1 Score: 140 bits (352), Expect = 4.380e-38
Identity = 65/124 (52.42%), Postives = 89/124 (71.77%), Query Frame = 0
Query:   75 PSLPEDGTPVFAIFVRSQRAKLWYPLGAVQGDDRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDRERFLQNALRMYPQLKRSQSSLEFGYKVAAIGLDERKIKLVEPDMALPFPAWVKKRV 198
            P LP+DGTPVFAIF R+QRAK+WYP+G V GD  SK+LV+A+K  +++ +Y+ ALDKGIAQ V+G D  +FL  A+  YPQL + +  LEFGYKV +  + +    +V P+ ALPF  WVK ++
Sbjct:   80 PELPKDGTPVFAIFARTQRAKIWYPVGMVGGDRNSKTLVNAMKANWSRKLYQGALDKGIAQVVFGPDSRKFLAGAMNKYPQLSKYRDELEFGYKVISTEIRDWPTTIVTPEAALPFFEWVKYKL 203          
BLAST of Ggra3592.t1 vs. uniprot
Match: A0A1X6NSY5 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSY5_PORUM)

HSP 1 Score: 140 bits (352), Expect = 4.760e-38
Identity = 67/140 (47.86%), Postives = 102/140 (72.86%), Query Frame = 0
Query:   60 RSRQPVQ-QSRRPDSAPSLPEDGTPVFAIFVRSQRAKLWYPLGAVQGDDRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDRERFLQNALRMYPQLKRSQSSLEFGYKVAAIGLDERKIKLVEPDMALPFPAWVKKRV 198
            R +QP++ Q + P   P  PEDGTP+F++FVRS+R KLWYP+GAV+GD R+K+LV +++  + K +Y+ AL+KG+AQT++  D  +F   ALR YPQLK+S++ L+FGYKV A  +++   +++  DM LPF  + KKR+
Sbjct:   64 RLQQPLRPQGQSPRGPPPPPEDGTPIFSVFVRSRRTKLWYPVGAVRGDGRAKALVQSMRTSWGKKLYQGALNKGMAQTIFSGDGNKFTDQALRQYPQLKKSKADLQFGYKVTAKDINDWPTQVLTRDMRLPFFEYWKKRL 203          
BLAST of Ggra3592.t1 vs. uniprot
Match: A0A7S1ERZ3 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERZ3_9RHOD)

HSP 1 Score: 113 bits (282), Expect = 8.310e-29
Identity = 57/105 (54.29%), Postives = 71/105 (67.62%), Query Frame = 0
Query:   54 HMRKGPRSRQPVQQSRRPDSAPSLPEDGTPVFAIFVRSQRAKLWYPLGAVQGDDRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDRERFLQNALRMYPQLKR 158
            +M KG     P Q         SLPEDGTPVFAIF R+QRAK+WYP+G V GD +SK+LV A+K  + + +Y  ALDKGIAQ V+G D  +FL N L+ +PQLKR
Sbjct:    2 YMGKGKARYSPGQSPPPQQQGMSLPEDGTPVFAIFARTQRAKIWYPIGMVGGDGKSKTLVSAMKTSWGRTLYRGALDKGIAQVVFGPDAGKFLNNGLKQFPQLKR 106          
BLAST of Ggra3592.t1 vs. uniprot
Match: A0A836CMT2 (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT2_9STRA)

HSP 1 Score: 107 bits (266), Expect = 3.610e-25
Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 0
Query:   83 PVFAIFVRSQRAKLWYPLGAVQGDDRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDRERFLQNALRMYPQLKRSQSSLEFGYKVAAIGLDER----KIKLVEPDMAL 188
            PVF IF R++RA +WYP GA+ GD+RSK+ VDAL  GF   +Y NAL+KG+A++V G  + +   +  RMYPQL +  S+LEFG+KV    L+E+    KI L+  +M L
Sbjct:   93 PVFEIFCRTKRANMWYPCGALGGDERSKATVDALSNGFLSDLYRNALEKGVAESVLGPQKSQLKGSITRMYPQLAKEASNLEFGFKVKYAPLEEKLGPQKITLLTEEMKL 202          
BLAST of Ggra3592.t1 vs. uniprot
Match: A0A7S2S5A2 (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5A2_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.110e-19
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 0
Query:   80 DGTPVFAIFVRSQRAKLWYPLGAVQGDDRSKSLVDA-LKGGFAKGMYENALDKGIAQTVYGKDRERFLQNALRMYPQLKRSQSSLEFGYKVAAIGLDER--KIKLVEP 184
            DG PVF +FVR++RA +WYP G+ +GDD+S +L  + +  G   G+ +N LD G+A +++ +D ER      R YPQL++SQ  LEFGYK+   GL E   KI  VEP
Sbjct:   97 DGFPVFNLFVRTKRANMWYPCGSFKGDDKSGALAASYVDDGMMAGVSKNQLDAGVAGSLF-RDFERLKGTVTRAYPQLRKSQDELEFGYKLGYAGLTEEQSKINKVEP 203          
BLAST of Ggra3592.t1 vs. uniprot
Match: A0A7S0LGQ7 (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LGQ7_9EUKA)

HSP 1 Score: 79.3 bits (194), Expect = 1.020e-14
Identity = 44/107 (41.12%), Postives = 70/107 (65.42%), Query Frame = 0
Query:   64 PVQQSRRPDSAPSLPEDGTPVFAIFVRSQRAKLWYPLGAVQGDDRSKSLVDA-LKGGFAKGMYENALDKGIAQTVYGKDRERFLQNALRMYPQLKRSQSSLEFGYKV 169
            P QQ R P+    LP  G  VF ++ R++   +WYP+  ++GD +SK LV+A L   FAKG+++N LD G+A++++  +R R  + A + YP LK++ + LE+GYKV
Sbjct:   64 PQQQQREPE----LPPPGQSVFYLYCRTKARVMWYPVSQMKGDGQSKGLVNAWLNSPFAKGVFKNRLDAGMARSIFESER-RLSEMAKQQYPSLKKA-NQLEWGYKV 164          
The following BLAST results are available for this feature:
BLAST of Ggra3592.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3ICD61.390e-10172.25Protein HHL1, chloroplastic n=1 Tax=Gracilariopsis... [more]
R7QNR71.270e-4957.14Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0T7K41.100e-4150.70Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A6T6MJ055.740e-4151.13Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z7214.380e-3852.42Protein HHL1, chloroplastic n=1 Tax=Porphyridium p... [more]
A0A1X6NSY54.760e-3847.86Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1ERZ38.310e-2954.29Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A836CMT23.610e-2548.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2S5A21.110e-1946.30Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S0LGQ71.020e-1441.12Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR045388Protein HHL1-likePFAMPF20133DUF6523coord: 9..208
e-value: 1.6E-39
score: 135.0
IPR045388Protein HHL1-likePANTHERPTHR48191PROTEIN HHL1 CHLOROPLASTICcoord: 50..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:197598..198236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3592.t1Ggra3592.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 197598..198236 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3592.t1 ID=Ggra3592.t1|Name=Ggra3592.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=213bp
MAQGTQMQPAFSNAVSFRPAIRPVHSTSLRCPISPVRQTNPTPATVQPLR
RTPHMRKGPRSRQPVQQSRRPDSAPSLPEDGTPVFAIFVRSQRAKLWYPL
GAVQGDDRSKSLVDALKGGFAKGMYENALDKGIAQTVYGKDRERFLQNAL
RMYPQLKRSQSSLEFGYKVAAIGLDERKIKLVEPDMALPFPAWVKKRVES
AFKSLTSPGGES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045388HHL1-like