Ggra3013.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3013.t1
Unique NameGgra3013.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length295
Homology
BLAST of Ggra3013.t1 vs. uniprot
Match: A0A2V3IZ60 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ60_9FLOR)

HSP 1 Score: 425 bits (1093), Expect = 6.440e-148
Identity = 215/293 (73.38%), Postives = 255/293 (87.03%), Query Frame = 0
Query:    1 MLNANTMPYVATQQNLAYTLALLRNNDNENYLANLLQLRSVSRAHAAIRAFNIELANIRSNVSNEDLGLLRLQFFRSQFADVLSNPNPNPASPVMDVLAEAVSSYPQVNFDLLYALIDARATDLSYPNFRSLRELQSFGEQTQGPLIHLHALLLGGAPHVENIAKMAGAAVGLSIILRGAPAHAASRLSYMPRNLVERYGVLQSHLISGEGDAVHVFRTVAKRARRCLKVAQIKSSLLPHPVKQAFWPLIMSDIYLRRLRKAGDNPFDKRLAQGLRTTYPLSLQMRLLLARLR 293
            M + + +PY+AT +NLAYTL LLR NDNENYLANLLQ R+VSR HAAIRA NIELANIR +VSNEDLG LRLQFFR+QFAD+LS+PNP P SPV+DVLAE++ S+PQVNF LL+ LIDAR TDL YP   ++R+LQ+FGE+TQG LIHLHAL LG  P+V +IA++AGAAVGLSI+LRGAP+HAASRLSYMPR LV+++ + QS LISGEGDAV V+R VA RARRCL+VAQ +SSLL  PVK+AFWPLIM+DIYLRRL+KAGDNPFD+ LA+GLRTTYPL+LQMRLL +RLR
Sbjct:    1 MRDGSPVPYIATPENLAYTLNLLRTNDNENYLANLLQPRTVSRVHAAIRALNIELANIRFSVSNEDLGRLRLQFFRAQFADILSDPNPTPGSPVLDVLAESIHSFPQVNFRLLHTLIDARETDLGYPYHSTIRDLQTFGERTQGTLIHLHALCLGAEPNVVSIARLAGAAVGLSILLRGAPSHAASRLSYMPRKLVQKHAITQSQLISGEGDAVPVYRAVANRARRCLQVAQARSSLLRQPVKKAFWPLIMADIYLRRLKKAGDNPFDENLAKGLRTTYPLALQMRLLFSRLR 293          
BLAST of Ggra3013.t1 vs. uniprot
Match: M2XRU3 (Phytoene synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRU3_GALSU)

HSP 1 Score: 134 bits (338), Expect = 7.530e-34
Identity = 91/269 (33.83%), Postives = 145/269 (53.90%), Query Frame = 0
Query:    9 YVATQQNLAYTLALLRNNDNENYLANLLQLRSVSRAHAAIRAFNIELANIRSNVSNEDLGLLRLQFFRSQFADVLSNPNPNPASPVMDVLAEAVSSYPQVNFDLLYALIDARATDLSYPNFRSLRELQSFGEQTQGPLIHLHALLLGGAP---HVENIAKMAGAAVGLSIILRGAPAHAASRLSYMPRNLVERYGV---LQSHLISGEGDAVHVFRTVAKRARRCLKVAQIKSSLLPHPVKQAFWPLIMSDIYLRRLRKAGDNPFDKRL 271
            Y A   +  Y L LLR  D++ +L NL+Q  +  RAHAAIRAFN+EL  IR  V+NEDLG LR+ FFR       +   P+   PV+D+L+EA+  +  ++      L+ AR  DLS PNF++++E++ F E TQ  L++ +    G       V   A   G A+GL+I+LRG   H  SRL Y P+  +++Y V   L    +  E +++ + + +++ A   +  A+     +P  +  AF    + D+YL ++R+      D R+
Sbjct:   25 YRAQDSSFGYCLDLLRRYDHDQFLVNLVQPNTHRRAHAAIRAFNVELTRIRQIVTNEDLGRLRVTFFREALERAFA-ATPDK-QPVLDLLSEAIVQFG-LSKKWFERLLSAREADLSLPNFQTIQEVEHFTESTQSSLLYAYLETFGKRQLSLPVYQAASHLGQALGLTILLRGTRHHIESRLCYFPKEWIQKYRVDLPLHYRGLWKESNSIGMLQEMSELASYHIATARQYVGDIPPLLFPAFLSSTIVDVYLAKIRRYHYQMLDPRV 290          
BLAST of Ggra3013.t1 vs. uniprot
Match: M1UVJ5 (Similar to phytoene synthase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UVJ5_CYAM1)

HSP 1 Score: 134 bits (338), Expect = 2.800e-33
Identity = 101/310 (32.58%), Postives = 161/310 (51.94%), Query Frame = 0
Query:   11 ATQQNLAYTLALLRNNDNENYLANLLQLRSVSR-AHAAIRAFNIELANIRSNVSNEDLGLLRLQFFRSQFADVLSNPNPNP------ASPVMDVLAEAVSSY--PQVNFDLLYALIDARATDLSYPNFRSLRELQSFGEQTQGPLIHLHALLL-----GGAPH-------VENIAKMAGAAVGLSIILRGAPAHAASRLSYMPRNLVERYGVLQSHLIS----GEGDAVHVFRTVAKRARRCLKVAQIKSSL---LPHPVKQAFWPLIMSDIYLRRLRKAGDNPFDKRLAQGLRTTYPLSLQMRLLLARL 292
            A +Q+  Y L  LR  +   YL N+L     +R AHAA+ AFN++LA I+ +VSNED+G LRL FFR+    +    +         +SP +  L E +  +  P   F+ L+A   AR  DL YP   ++++L  + + + G  I LHA +L      G P        ++ +A   G A GL+ +LRGAP HAA   +Y+PR+++E + +    L++       D    F+++A  A   L+ A+        +P   + AF P +++  YLR+LR +G + FD+RL   +       +Q+RLLL+RL
Sbjct:   66 AQRQDYEYCLQQLRQMEYGAYLINVLHAEQRARCAHAALFAFNLQLARIKDSVSNEDMGRLRLSFFRNAVHGIYDGSSAETGVRTSISSPTLRALCETIQRFALPVEPFEALFA---AREQDLKYPQPHTIQDLVEYTQASHGSCIALHARILHAVGANGEPPKRETAQLLDRVAMDVGTAAGLATLLRGAPYHAARLQTYVPRDVMEAWKISAKELVNLQVQSSVDRRGAFQSIALVAEEYLERARSDKETWKRIPRSCRLAFLPAVLAADYLRKLRASGYDAFDRRLQLPMTP----GIQLRLLLSRL 368          
BLAST of Ggra3013.t1 vs. uniprot
Match: A0A7J7INR5 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INR5_9RHOD)

HSP 1 Score: 132 bits (333), Expect = 1.430e-32
Identity = 102/308 (33.12%), Postives = 157/308 (50.97%), Query Frame = 0
Query:   11 ATQQNLAYTLALLRNNDNENYLANLLQLRSVSR-AHAAIRAFNIELANIRSNVSNEDLGLLRLQFFRSQFADVLSNPNPNPA------SPVMDVLAEAVS--SYPQVNFDLLYALIDARATDLSYPNFRSLRELQSFGEQTQGPLIHLHALLL----------GGAPHVENIAKMAGAAVGLSIILRGAPAHAASRLSYMPRNLVERYGV----LQSHLISGEGDAVHVFRTVAKRARRCLKVAQIKSSL---LPHPVKQAFWPLIMSDIYLRRLRKAGDNPFDKRLAQGLRTTYPLSLQMRLLLARL 292
            A + +  + L  LR +D  NYL NLL     SR AHA++ AF+++LA I+  V+NED+G LRL FFR     +    +          SP +  L E +   S P   F+LL   + AR  DL YP   ++ EL  + +   G  I LHA +L               ++  A   G A GL+++LRGAP HAA   +Y+PR++++   V    L S  +S   +    F++VA+ A   L  A+ +S+    +P   + AF P +++  YLRRLR +G + +D+RL    +  +    Q+RLLL R+
Sbjct:   66 AQRSDYEFCLQQLRQSDYGNYLINLLHSSHDSRCAHASLFAFSVQLARIKDAVTNEDMGRLRLSFFRDALQGIYDADHAMARVYGPLQSPTLRALRETIQRFSLPVEPFNLL---LSAREADLRYPQPETVHELVKYAQAAHGSCIALHARVLLATLEKPVEQEALAAIDLFATQIGTASGLAVLLRGAPHHAAKFQTYVPRDIMKACNVSVKELVSQKVSVSSNRKKAFQSVAEMAEEYLNRARRESAAWKCVPRACRLAFLPAVLASAYLRRLRSSGYDVYDRRL----QLPWTPGTQLRLLLNRM 366          
BLAST of Ggra3013.t1 vs. uniprot
Match: A0A7J6C6T4 (Uncharacterized protein n=7 Tax=Cyprinidae TaxID=7953 RepID=A0A7J6C6T4_9TELE)

HSP 1 Score: 126 bits (316), Expect = 1.810e-30
Identity = 92/277 (33.21%), Postives = 144/277 (51.99%), Query Frame = 0
Query:   13 QQNLAYTLALLRNNDNENYLANLLQLRSVSRAHAAIRAFNIELANIRSNVSNEDLGLLRLQFFRSQFADVLSNPNPNPASPVMDVLAEAVSSYPQVNFDLLYALIDARATDLSYPNFRSLRELQSFGEQTQGPLIHLHALLLGGAP-HVENIAKMAGAAVGLSIILRGAPAHAASRLSYMPRNLVERYGVLQSHLISGEGD--AVHVFRTVAKRARRCLKVAQIKSSLLPHPVKQAFWPLIMSDIYLRRLRKAGDNPFDKRLAQGLRTTYPLSLQMR 286
            Q N  Y +  +R  D E +L +LL   +V R+  A+RAFN+E+A I+ +VS + +GL+R+QF++S   D+  +  P  A PV   L  AV  +      +L  +I  R  DL    +R+L+EL+++GE TQ  L++L    LG    H ++ A   G A G+   LR  P +++ R  Y+P ++   +GV Q   I G  D     V   +A +A   L+ A+  S  +PH    AF   ++ + YL+R+RKA  + F   L Q      PL L +R
Sbjct:   50 QHNEQYCIDTVRKRDYEGFLCSLLFPEAVRRSALALRAFNVEVAQIKDSVSQKTIGLMRMQFWKSAVEDIYRDDPP--AQPVSGELWRAVRKHTLTRRWML-RIISEREKDLEDKAYRNLQELEAYGENTQSSLLYLLLETLGVKNVHADHAASHIGKAQGILTCLRATPYNSSRRKVYLPMDICMLHGVSQEDFIRGSRDQNVRDVIYDIASQAHVHLQHARSFSENVPHAAMPAFLQTVVLEDYLQRVRKADFDVFHPSL-QKRNPMLPLQLYIR 322          
BLAST of Ggra3013.t1 vs. uniprot
Match: A0A293MZJ4 (Uncharacterized protein n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MZJ4_ORNER)

HSP 1 Score: 123 bits (308), Expect = 1.940e-29
Identity = 87/272 (31.99%), Postives = 143/272 (52.57%), Query Frame = 0
Query:   13 QQNLAYTLALLRNNDNENYLANLLQLRSVSRAHAAIRAFNIELANIRSNVSNEDLGLLRLQFFRSQFADVLSNPNPNPASPVMDVLAEAVSSYPQVNFDLLYALIDARATDLSYPNFRSLRELQSFGEQTQGPLIHLHALLLGGAP-HVENIAKMAGAAVGLSIILRGAPAHAASRLSYMPRNLVERYGVLQSHLISGEGDAVHVFRTVAKRARRCLKVAQIKSSLLPHPVKQAFWPLIMSDIYLRRLRKAGDNPFDKRLAQGLRTTYPLSL 283
            Q + AY + +L+  D EN+L  LL  +++ R   +IRAFN+EL+ IR  VS  D+G +R+QF+R     +    NP P  PV   L  AV S  Q++   L  +I++R   ++     +L++ + + E++     +L     G    H +++A   G   GL+ ++RG P +A+    Y+P   + ++ V Q  ++ G+GD   V   +A  A + L+VA+     +P P++  F P +  D YL+RLR A    FD RL Q    T PL+L
Sbjct:   37 QGSAAYCMDMLKKYDYENFLCCLLLPQAIRRIAVSIRAFNVELSQIRDLVSRPDIGRMRIQFWRDALEKIYKG-NP-PQQPVAIELEMAVKS-KQLSKHWLSRMIESREELIADKPHVNLQKAEDYAEKSIASTFYLILQASGTQDVHCDHVASHVGRLQGLTNLIRGVPFNASKGRVYLPVETMAKHKVSQEAVVQGKGDVREVIYEIASAAHQHLEVARSLQQNVPLPLRTVFLPAVSCDKYLQRLRMADFEVFDGRLQQR-NHTLPLAL 304          
BLAST of Ggra3013.t1 vs. uniprot
Match: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6-like isoform X1 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72E97F (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6-like isoform X1 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72E97F)

HSP 1 Score: 122 bits (307), Expect = 3.370e-29
Identity = 91/264 (34.47%), Postives = 138/264 (52.27%), Query Frame = 0
Query:   15 NLAYTLALLRNNDNENYLANLLQLRSVSRAHAAIRAFNIELANIRSNVSNEDLGLLRLQFFRSQFADVLSNPNPN--PASPVMDVLAEAVSSYPQVNFDLLYALIDARATDLSYPNFRSLRELQSFGEQTQGPLIHLHALLLGGAP-HVENIAKMAGAAVGLSIILRGAPAHAASRLSYMPRNLVERYGVLQSHLISG--EGDAVHVFRTVAKRARRCLKVAQIKSSLLPHPVKQAFWPLIMSDIYLRRLRKAGDNPFDKRLAQ 273
            N  Y   L++  D ENYL  LL  + V RA  AIRAFN+E+A +R  VS + +G +R+QF++    DVL N N    P  PV   LA AV  Y +++   L  L++ RA  L    F S++E++ + E T   L +L    LG    H ++ A   G A GL+ +LR  P HA  R  Y+P +++ +  V Q  +I G  E +       VA  A + L++A+     +P     AF   +  D+YL++L+KA  N F+ +L +
Sbjct:   44 NADYCRELVKKFDFENYLWCLLMPKEVQRAAFAIRAFNVEIAQVRDVVSEKKIGFMRMQFWK----DVLQNINEGSPPQMPVAVELAGAVR-YFKLSRRYLSHLLEGRADQLEIDGFTSVKEVEKYAENTVSSLHYLMLECLGVKNVHADHAASHIGKAQGLTTLLRATPYHAQQRRVYLPIDIIVKNKVSQEDVIRGRNEQNIRDAIFEVASLAHQHLEIARSFHKDVPKTAVPAFINTVPCDLYLKKLQKANFNVFEPKLQE 302          
BLAST of Ggra3013.t1 vs. uniprot
Match: Q4V8Q6 (LOC569692 protein (Fragment) n=5 Tax=Cyprinoidei TaxID=30727 RepID=Q4V8Q6_DANRE)

HSP 1 Score: 123 bits (308), Expect = 3.530e-29
Identity = 87/277 (31.41%), Postives = 144/277 (51.99%), Query Frame = 0
Query:   13 QQNLAYTLALLRNNDNENYLANLLQLRSVSRAHAAIRAFNIELANIRSNVSNEDLGLLRLQFFRSQFADVLSNPNPNPASPVMDVLAEAVSSYPQVNFDLLYALIDARATDLSYPNFRSLRELQSFGEQTQGPLIHLHALLLGGAP-HVENIAKMAGAAVGLSIILRGAPAHAASRLSYMPRNLVERYGVLQSHLISGEGD--AVHVFRTVAKRARRCLKVAQIKSSLLPHPVKQAFWPLIMSDIYLRRLRKAGDNPFDKRLAQGLRTTYPLSLQMR 286
            Q N  Y + ++R  D E +L +LL   +  R+  A+RAFN+ELA I+ +VS++ +GL+R+QF++S   D+  +  P  A PV   L  AV  +      +L  ++  R  D+    +R+L++L+++GE TQ  L++L    LG    H ++ A   G A G+   LR  P +++ R  Y+P ++   +G  Q   I G  D     V   +A +A   L+ A+  +  +PH    AF   ++ + YL+R+RK   + F   L Q    T PL L +R
Sbjct:   66 QHNEQYCIDIVRKKDYEGFLCSLLLPEAARRSALALRAFNVELAQIKDSVSHKTIGLMRMQFWKSAVEDIYRDDPP--AQPVSAELWRAVRKHTLTRRWML-RIVSEREKDMEDRAYRNLQDLEAYGENTQSSLLYLLLETLGVKNVHADHAASHIGKAQGILTCLRATPFNSSRRKVYLPMDICMLHGASQEDFIRGSRDQNVRDVVYDIASQAHVHLQHARSFAESVPHSAMPAFLQTVVLEDYLQRVRKVDFDVFHPSL-QKRNPTLPLQLYLR 338          
BLAST of Ggra3013.t1 vs. uniprot
Match: A0A2R5LC51 (Putative phytoene/squalene synthetase (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LC51_9ACAR)

HSP 1 Score: 121 bits (304), Expect = 5.070e-29
Identity = 89/276 (32.25%), Postives = 145/276 (52.54%), Query Frame = 0
Query:   10 VATQQNLAYTLALLRNNDNENYLANLLQLRSVSRAHAAIRAFNIELANIRSNVSNEDLGLLRLQFFRSQFADVLSNPNPNPASPVMDVLAEAVSSYPQVNFDLLYALIDARATDLSYPNFRSLRELQSFGEQTQGPLIHLHALLLGGAPHVE--NIAKMAGAAVGLSIILRGAPAHAASRLSYMPRNLVERYGVLQSHLISGEGDAVHVFRTVAKRARRCLKVAQIKSSLLPHPVKQAFWPLIMSDIYLRRLRKAGDNPFDKRLAQGLRTTYPLSL 283
            V  Q N  Y + +L+  D EN+L  LL  + + R+  +IRAFN+EL+ IR  VS  ++G +R+QF+R    ++  N +P P  PV   LA AV S  +++   L  +ID+R   ++     +L+  + + E++    ++L  L   G   V+  ++A   G   GL+ ++RG P +A+    Y+P   + ++ V Q  +  G+GD   V   +A  A + L  A+     +P  ++  F P + SD YL+RLR A  N FD RL Q    T PL+L
Sbjct:   16 VTPQSNAHYCMDILKKYDYENFLCCLLLPKDIRRSAISIRAFNVELSQIRDLVSKPEIGRMRIQFWRDALENIY-NESP-PQQPVAMELALAVQS-KRLSKHWLNRMIDSREDLITDRPHTTLQNAEDYAERSISSTLYL-ILQASGIQDVQCDHVASHVGRLQGLTNLIRGVPFNASRGRVYLPIETMAKHKVSQEAVAQGKGDVKEVIYEIASAAHQHLDTARSLQHKVPLSLRTVFLPAVSSDKYLQRLRLADFNVFDARLQQR-NHTLPLAL 286          
BLAST of Ggra3013.t1 vs. uniprot
Match: A0A3P9BPK9 (NADH:ubiquinone oxidoreductase complex assembly factor 6 n=10 Tax=Cichlidae TaxID=8113 RepID=A0A3P9BPK9_9CICH)

HSP 1 Score: 122 bits (306), Expect = 5.370e-29
Identity = 90/286 (31.47%), Postives = 146/286 (51.05%), Query Frame = 0
Query:    4 ANTMPYVATQQNLAYTLALLRNNDNENYLANLLQLRSVSRAHAAIRAFNIELANIRSNVSNEDLGLLRLQFFRSQFADVLSNPNPNPASPVMDVLAEAVSSYPQVNFDLLYALIDARATDLSYPNFRSLRELQSFGEQTQGPLIHLHALLLGGAP-HVENIAKMAGAAVGLSIILRGAPAHAASRLSYMPRNLVERYGVLQSHLISG--EGDAVHVFRTVAKRARRCLKVAQIKSSLLPHPVKQAFWPLIMSDIYLRRLRKAGDNPFDKRLAQGLRTTYPLSLQMR 286
            A+T     +Q    Y L ++R+ D + +L++LL      R+  A+RAFN+ELA ++ +VS + +GL+R+QF+++   ++  N  PN   PV   L  AV ++      LL  +I  R  DL    +R+L+EL+++ E TQ  LI+L    LG      ++ A   G A G+   LR  P H++ R  Y+P ++   +G  Q   I G  E +   V   +A +A   L+ AQ  S  +P     AF P ++ + YL R+R+   + F K L Q      P+ L +R
Sbjct:   44 ASTSTTGDSQHTQKYCLDMVRSRDYDGFLSSLLLPEKARRSSLALRAFNVELAQVKDSVSQKTIGLMRMQFWKTAIEEIYRNEPPN--QPVSTELWRAVRTHKLTKRWLL-RIITEREKDLDDRAYRNLQELEAYSENTQSSLIYLLLECLGVKNVQADHAASHIGKAQGIITCLRATPYHSSRRKVYLPMDICMLHGASQEDFIRGSREQNIRDVVYDIASQAHVHLQHAQSFSHNVPAAATPAFLPTVVLEDYLHRVRRVDFDVFHKSL-QNRNPLLPIQLYIR 325          
The following BLAST results are available for this feature:
BLAST of Ggra3013.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ606.440e-14873.38NADH dehydrogenase (Ubiquinone) complex I, assembl... [more]
M2XRU37.530e-3433.83Phytoene synthase n=1 Tax=Galdieria sulphuraria Ta... [more]
M1UVJ52.800e-3332.58Similar to phytoene synthase n=1 Tax=Cyanidioschyz... [more]
A0A7J7INR51.430e-3233.12NADH dehydrogenase (Ubiquinone) complex I, assembl... [more]
A0A7J6C6T41.810e-3033.21Uncharacterized protein n=7 Tax=Cyprinidae TaxID=7... [more]
A0A293MZJ41.940e-2931.99Uncharacterized protein n=1 Tax=Ornithodoros errat... [more]
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6-like isoform X1 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72E97F3.370e-2934.47NADH dehydrogenase (ubiquinone) complex I, assembl... [more]
Q4V8Q63.530e-2931.41LOC569692 protein (Fragment) n=5 Tax=Cyprinoidei T... [more]
A0A2R5LC515.070e-2932.25Putative phytoene/squalene synthetase (Fragment) n... [more]
A0A3P9BPK95.370e-2931.47NADH:ubiquinone oxidoreductase complex assembly fa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002060Squalene/phytoene synthasePFAMPF00494SQS_PSYcoord: 23..271
e-value: 4.6E-34
score: 118.1
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10Farnesyl Diphosphate Synthasecoord: 5..268
e-value: 1.7E-27
score: 98.5
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 15..290
NoneNo IPR availablePANTHERPTHR21181:SF13NADH DEHYDROGENASE (UBIQUINONE) COMPLEX I, ASSEMBLY FACTOR 6coord: 12..292
NoneNo IPR availablePANTHERPTHR21181FAMILY NOT NAMEDcoord: 12..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000858_piloncontigtig00000858_pilon:865437..866381 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3013.t1Ggra3013.t1Gracilaria gracilis GNS1m malemRNAtig00000858_pilon 865437..866381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3013.t1 ID=Ggra3013.t1|Name=Ggra3013.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=295bp
MLNANTMPYVATQQNLAYTLALLRNNDNENYLANLLQLRSVSRAHAAIRA
FNIELANIRSNVSNEDLGLLRLQFFRSQFADVLSNPNPNPASPVMDVLAE
AVSSYPQVNFDLLYALIDARATDLSYPNFRSLRELQSFGEQTQGPLIHLH
ALLLGGAPHVENIAKMAGAAVGLSIILRGAPAHAASRLSYMPRNLVERYG
VLQSHLISGEGDAVHVFRTVAKRARRCLKVAQIKSSLLPHPVKQAFWPLI
MSDIYLRRLRKAGDNPFDKRLAQGLRTTYPLSLQMRLLLARLRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002060Squ/phyt_synthse
IPR008949Isoprenoid_synthase_dom_sf