Ggra2938.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2938.t2
Unique NameGgra2938.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length300
Homology
BLAST of Ggra2938.t2 vs. uniprot
Match: A0A2V3IW41 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW41_9FLOR)

HSP 1 Score: 278 bits (711), Expect = 1.470e-89
Identity = 136/209 (65.07%), Postives = 171/209 (81.82%), Query Frame = 0
Query:   97 SSAHFSQQLLNAARVDMYGLPVVPGDVPVTYPQVFRLEEKLLGAIRGAFHARDQQGTLRYKVDSKLASLHERKVLKDVNGQVLLKLREQRLTVRNRITFFSPTNIAILTLQKTTAVQFGTKRVHGFAGPDTSGTPALLITGDSDNTHFRVFSNQNQELCSIRRQKQTWK------NMLTDQDSYDVTINYGSPALMCFIAVALDEIYED 299
            S+ + SQQL +A+++D YGLPVVPGD+PVTYP+ FRLEE+LLG IRG+F ARDQQGTLRYKV+SK+ S+HERKVLKD++G VLLKLRE RLT+R+RIT F+PT+I ILTLQKT+ VQ   KRVHG+AGP   GTP L+ITG+ D T F V++ QN  +CS++R+  +WK      NM+T +D Y+VT+NYGSPALM FIAVA+DEIYED
Sbjct:  106 SAPYHSQQLYSASQLDAYGLPVVPGDLPVTYPETFRLEERLLGTIRGSFVARDQQGTLRYKVESKI-SVHERKVLKDMSGNVLLKLREARLTLRDRITLFTPTDIPILTLQKTSVVQMSEKRVHGYAGPQPGGTPILIITGNDDKTLFSVYNAQNHLMCSVQRETSSWKHMSTYKNMITGKDCYNVTVNYGSPALMLFIAVAIDEIYED 313          
BLAST of Ggra2938.t2 vs. uniprot
Match: R7Q331 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q331_CHOCR)

HSP 1 Score: 226 bits (577), Expect = 1.930e-69
Identity = 105/199 (52.76%), Postives = 149/199 (74.87%), Query Frame = 0
Query:  101 FSQQLLNAARVDMYGLPVVPGDVPVTYPQVFRLEEKLLGAIRGAFHARDQQGTLRYKVDSKLASLHERKVLKDVNGQVLLKLREQRLTVRNRITFFSPTNIAILTLQKTTAVQFGTKRVHGFAGPDTSGTPALLITGDSDNTHFRVFSNQNQELCSIRRQKQTWKNMLTDQDSYDVTINYGSPALMCFIAVALDEIYED 299
            ++  +    ++D +GLPVV  D P+ Y Q FRLEEK+L A R +F  +D QG LRYKVD  + SLH+RK + D++G++LLKLRE RL +R+RIT F+PT++A++ LQKTTA+QFGTKRVHG+ G      P L+ITG+ + T++++ +++ QE+  +RRQK + KNMLTDQD+Y VT+  GSPA +CF+AV LDEIY+D
Sbjct:  108 YTHPIAPGVQLDRFGLPVVDNDPPLQYAQTFRLEEKVLSASRDSFSIKDAQGVLRYKVDGSI-SLHDRKSISDMHGRILLKLREARLHLRDRITIFAPTDVALMILQKTTAIQFGTKRVHGYIGGHIKHAPDLVITGNHNKTYYKIMNSRGQEIADVRRQKFSLKNMLTDQDTYHVTVKAGSPAFVCFLAVVLDEIYDD 305          
BLAST of Ggra2938.t2 vs. uniprot
Match: A9T2I3 (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T2I3_PHYPA)

HSP 1 Score: 71.2 bits (173), Expect = 8.910e-11
Identity = 47/186 (25.27%), Postives = 95/186 (51.08%), Query Frame = 0
Query:  116 LPVVPGDVPVTYPQVFRLEEKLLGAIRGAFHARDQQGTLRYKVDSKLASLHERKVLKDVNGQVLLKLREQRLTVRNRITFFSPTNIAIL-TLQKTTAVQFGTKRVHGFAGPDTSG-TPALLITGDSDNTHFRVFSNQNQELCSIRRQKQTWKNMLTDQDSYDVTINYG-SPALMCFIAVALDEIYE 298
            +P+V         Q + + +K L   +G ++  DQ G   +KVD ++AS+ +++ L+D  G V+L ++++ +T+ +     +     ++ T +K++ VQF T      A   T   TP   + GD  + +  VF    Q   ++  ++ T+  ++ D+D++ VTI  G   AL+  + V +DE++ 
Sbjct:   61 VPIVGQQYVSNTVQSYAVAKKKLSVSKGDWNITDQAGHSAFKVDGRIASMRDKRFLRDAAGNVILSMKKKLITMHDTWEILTGNGDQVIATCKKSSVVQFKTSMDVMLASSTTGKHTPDYQVKGDFFDRNLTVFRGAEQ--AALVTRQITFTTVILDKDTFGVTIFPGVDQALVLALIVIMDEVFH 244          
BLAST of Ggra2938.t2 vs. uniprot
Match: A0A2C9VB57 (Uncharacterized protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9VB57_MANES)

HSP 1 Score: 69.3 bits (168), Expect = 2.510e-10
Identity = 51/179 (28.49%), Postives = 84/179 (46.93%), Query Frame = 0
Query:  127 YPQVFRLEEKLLGAIRGAFHARDQQGTLRYKVDSKLASLHERKVLKDVNGQVLLKLREQRLTVRNRITFF----SPTNIAILTLQKTTAVQFGTKRVHGFAGPDTS-GTPALLITGDSDNTHFRVFSNQNQELCSIRRQKQTWKNMLTDQDSYDVTINYGSP-ALMCFIAVALDEIYED 299
            YP    +  KLL      F   D  GTL +K+ SKL S+H+R+ L+D  G+ L  LR++  T   R   F    +     + + +K++ +QF T  +  F G +TS   P   I G        ++  ++  + +   ++ T K  L D D++ VT+      A +  + V LDEI +D
Sbjct:   33 YPVDLTIASKLLTLGENNFSVTDVNGTLIFKLKSKLLSIHDRRFLQDAAGKTLATLRQKIATAHRRWEVFRGESTDAKDLLFSAKKSSIIQFKTG-LDVFLGSNTSENVPDFKIKGTWKERSCTIYLGESNTIIAQMYRRHTVKTALLDADNFAVTVYPNVDYAFVVALVVVLDEINDD 210          
BLAST of Ggra2938.t2 vs. uniprot
Match: A0A2C9VBE1 (Uncharacterized protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9VBE1_MANES)

HSP 1 Score: 68.2 bits (165), Expect = 6.460e-10
Identity = 49/178 (27.53%), Postives = 78/178 (43.82%), Query Frame = 0
Query:  127 YPQVFRLEEKLLGAIRGAFHARDQQGTLRYKVDSKLASLHERKVLKDVNGQVLLKLREQRLTVRNRITFF----SPTNIAILTLQKTTAVQFGTKRVHGFAGPDTSGTPALLITGDSDNTHFRVFSNQNQELCSIRRQKQTWKNMLTDQDSYDVTINYGSP-ALMCFIAVALDEIYED 299
            YP    +  KLL      F   D  GTL +KV SKL S+H+R  L+D  G  L+ LR +  T   R   F          + + +K++ +QF T+         +   P   I G       R++  ++  + +   ++ T K  L D D++ VT+      A +  + V LDEI +D
Sbjct:   33 YPVDLIIASKLLALGENNFSVTDLNGTLIFKVKSKLLSIHDRHFLQDAAGNTLVTLRHKIATAHKRWEIFRGESKDAKDLLFSAKKSSIIQFKTELDVFLCSNTSENVPDFKIKGTWKERSCRIYLGESNTVIAQVHRRLTVKMALLDADNFAVTVYPNVDYAFVVALVVVLDEINDD 210          
BLAST of Ggra2938.t2 vs. uniprot
Match: B9T6F4 (Uncharacterized protein n=1 Tax=Ricinus communis TaxID=3988 RepID=B9T6F4_RICCO)

HSP 1 Score: 67.0 bits (162), Expect = 1.610e-9
Identity = 46/178 (25.84%), Postives = 83/178 (46.63%), Query Frame = 0
Query:  127 YPQVFRLEEKLLGAIRGAFHARDQQGTLRYKVDSKLASLHERKVLKDVNGQVLLKLREQRLTVRNRITFF----SPTNIAILTLQKTTAVQFGTKRVHGFAGPDTSGTPALLITGDSDNTHFRVFSNQNQELCSIRRQKQTWKNMLTDQDSYDVTINYGSP-ALMCFIAVALDEIYED 299
            YP    +  K+       F   D  GTL +K+ SKL S+H+R+ LKD     L+ LR++ +T   R   F    +     + +++K++ +QF T+ ++ F   +TS  P   I G        +F  ++  + +   +       + + D+++VT+      A +  + V LDEI ED
Sbjct:   32 YPVDLTVATKIFSLGENDFKVTDVNGTLIFKLKSKLLSIHDRRYLKDAAENTLVTLRQKIMTAHRRWEAFRGESTEAKDLLFSVKKSSIIQFKTQ-LNVFLASNTSEVPDFKIKGTWRERSCTIFLGESNIIVAKMHRGHNLTTAILETDNFEVTVYPNVDYAFIAALVVVLDEINED 208          
BLAST of Ggra2938.t2 vs. uniprot
Match: A9T0M4 (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T0M4_PHYPA)

HSP 1 Score: 65.5 bits (158), Expect = 7.230e-9
Identity = 47/155 (30.32%), Postives = 81/155 (52.26%), Query Frame = 0
Query:  149 DQQGTLRYKVDSKLASLHERKVLKDVNGQVLLKLREQRLTVRNRITFFSPTNIAIL-TLQKTTAVQFGTKRVHGFAGPDTSG--TPALLITGDSDNTHFRVFSNQNQELCSIRRQKQTWKNMLTDQDSYDVTINYG-SPALMCFIAVALDEIYED 299
            DQ G   +KV  K+AS+ +++ LKD  G  +L L+++ +T+ N     +     +L T +K++ VQ  T  +       TSG  TP   + GD  N +  ++    +E   + RQ    ++ + D+DS+ VTI+ G   AL+  + V +DEI+ D
Sbjct:   73 DQNGNSSFKVSGKIASMRDKRYLKDAAGNKILTLKKKLITMHNSWEILAGDGSNVLATCKKSSLVQVKTA-MDVMLASSTSGKNTPDYQVKGDFFNYNIAIYRG-TEEAAVVTRQINV-RSQILDKDSFGVTIHPGVDQALIFALIVVMDEIFLD 224          
BLAST of Ggra2938.t2 vs. uniprot
Match: A0A2C9V9X0 (Uncharacterized protein n=2 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9V9X0_MANES)

HSP 1 Score: 60.1 bits (144), Expect = 4.440e-7
Identity = 47/178 (26.40%), Postives = 79/178 (44.38%), Query Frame = 0
Query:  127 YPQVFRLEEKLLGAIRGAFHARDQQGTLRYKVDSKLASLHERKVLKDVNGQVLLKLREQRLTVRNRITFF--SPTNIA--ILTLQKTTAVQFGTKRVHGFAGPDTSGTPALLITGDSDNTHFRVFSNQNQELCSIRRQKQTWKNMLTDQDSYDVTINYGSP-ALMCFIAVALDEIYED 299
            YP   R+  KLL          D  GTL +KV SKL S+ +R+ L D  G +L   +++ LT   R   F    TN    I +++K++ +Q  ++     A       P   + G        ++   +  + +   +K T  +++ D D++ VT+      A +  + V LDEI ED
Sbjct:   33 YPVDLRVAAKLLSLGECNLGVTDVNGTLIFKVKSKLLSIRDRRYLLDAAGNILATFQQKILTAHRRWQVFRGDSTNAQDLIFSVKKSSMIQLKSELDVFLATNTAENVPDFKVKGSWSERSCIIYLGLSNIIIAQMHRKHTLSSVVFDADNFGVTVYPNVDYAFIVALVVILDEINED 210          
BLAST of Ggra2938.t2 vs. uniprot
Match: protein LURP-one-related 10-like n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C358A4F (protein LURP-one-related 10-like n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C358A4F)

HSP 1 Score: 60.1 bits (144), Expect = 8.610e-7
Identity = 40/169 (23.67%), Postives = 81/169 (47.93%), Query Frame = 0
Query:  116 LPVVPGDVPVTYPQVFRLEEKLLGAIRGAFHARDQQGTLRYKVDSKLASLHERKVLKDVNGQVLLKLREQRLTVRNRITFF-----SPTNIAILTLQKTTAVQFGTKRVHGFAGPDTSGTPA-LLITGDSDNTHFRVFSNQNQELCSIRRQKQTWKNMLTDQDSYDVTI 278
            LPV+       Y  +  + +K++    G F   D   T+ +KV+ KL + H+++VL D +G  ++ LR++R+T  +R   +      P ++ I ++Q+++ +Q   K +H F   +T       ++ G        V++     + +   ++ T  N L  +D Y VT+
Sbjct:   19 LPVISTKYCTPYSIILAVVKKVMTISGGGFVVTDTNNTVIFKVEGKLMTFHDQRVLLDADGMPIVTLRQKRMTAHHRWNVYRGKSKEPGDL-IFSVQRSSMIQLKAK-LHVFLANNTEKKVCDFMVEGTWAEKTCVVYTGDRTNILAKMEKETTIGNALIGKDKYSVTV 185          
BLAST of Ggra2938.t2 vs. uniprot
Match: B9T6F6 (Uncharacterized protein n=2 Tax=Ricinus communis TaxID=3988 RepID=B9T6F6_RICCO)

HSP 1 Score: 58.5 bits (140), Expect = 1.610e-6
Identity = 38/156 (24.36%), Postives = 72/156 (46.15%), Query Frame = 0
Query:  127 YPQVFRLEEKLLGAIRGAFHARDQQGTLRYKVDSKLASLHERKVLKDVNGQVLLKLREQRLTVRNRITFF--SPTNIA--ILTLQKTTAVQFGTKRVHGFAGPDTSGTPALLITGDSDNTHFRVFSNQNQELCSIRRQKQTWKNMLTDQDSYDVTI 278
            YP   ++  KL+      F   D  GTL ++V SKL S+ +R+ L D+ G V+   +++ +T   R   F    TN    + +++K++ +QF T+     A       P   + G        ++  Q   + +   +K T + ++ D D++ VT+
Sbjct:   33 YPVDLKVATKLMSFGESNFGVTDMNGTLIFRVKSKLLSIRDRRHLLDIAGNVIATFQQKIMTAHRRWKVFRGESTNDQDLLFSVKKSSIIQFKTELDVCLAANTAEDVPDFKVRGSWLERSCTIYLGQTNTIIAQMHRKHTLQTVVFDADNFGVTV 188          
The following BLAST results are available for this feature:
BLAST of Ggra2938.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3IW411.470e-8965.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q3311.930e-6952.76Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A9T2I38.910e-1125.27Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A2C9VB572.510e-1028.49Uncharacterized protein n=1 Tax=Manihot esculenta ... [more]
A0A2C9VBE16.460e-1027.53Uncharacterized protein n=1 Tax=Manihot esculenta ... [more]
B9T6F41.610e-925.84Uncharacterized protein n=1 Tax=Ricinus communis T... [more]
A9T0M47.230e-930.32Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A2C9V9X04.440e-726.40Uncharacterized protein n=2 Tax=Crotonoideae TaxID... [more]
protein LURP-one-related 10-like n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C358A4F8.610e-723.67protein LURP-one-related 10-like n=1 Tax=Carya ill... [more]
B9T6F61.610e-624.36Uncharacterized protein n=2 Tax=Ricinus communis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007612LURP-one-relatedPFAMPF04525LORcoord: 127..282
e-value: 4.1E-16
score: 59.1
IPR038595LURP-one-related superfamilyGENE3D2.40.160.200coord: 122..299
e-value: 1.3E-24
score: 88.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..94
IPR025659Tubby-like, C-terminalSUPERFAMILY54518Tubby C-terminal domain-likecoord: 118..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000858_piloncontigtig00000858_pilon:553850..554749 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2938.t2Ggra2938.t2Gracilaria gracilis GNS1m malemRNAtig00000858_pilon 553850..554749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2938.t2 ID=Ggra2938.t2|Name=Ggra2938.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=300bp
MHGMHPYMLQPFHMPYALPPAAMPYGMMPYMQPYAQYPSPYAQPYAPPPP
YYAPPYAPHAYAPPPYASHPPMPQMPLHKPPEPAPAPAHPHPQPAPSSAH
FSQQLLNAARVDMYGLPVVPGDVPVTYPQVFRLEEKLLGAIRGAFHARDQ
QGTLRYKVDSKLASLHERKVLKDVNGQVLLKLREQRLTVRNRITFFSPTN
IAILTLQKTTAVQFGTKRVHGFAGPDTSGTPALLITGDSDNTHFRVFSNQ
NQELCSIRRQKQTWKNMLTDQDSYDVTINYGSPALMCFIAVALDEIYED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007612LOR
IPR038595LOR_sf
IPR025659Tubby-like_C