Ggra2452.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2452.t1
Unique NameGgra2452.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length232
Homology
BLAST of Ggra2452.t1 vs. uniprot
Match: A0A2V3J0E0 (Succinate-acetate/proton symporter SatP n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0E0_9FLOR)

HSP 1 Score: 234 bits (596), Expect = 4.090e-74
Identity = 135/231 (58.44%), Postives = 170/231 (73.59%), Query Frame = 0
Query:    1 MSTISSSPRPSYEKLLPSIAKRLDSLEKALLPLPVTTK-SFRPIANPAPLGLLGFAAVSILAAIPKLEHRA-TDISPLIFVVAFFLGGMGQVIAALLEYTCNHLHAASTFALFGLHWSAQAILIASKSLSLKDFTPI-HAHDAAVYYTILTVATVMLTIPSFRMNRVLTVTLFFVIFAFGFDVPAAFGHHWAEVGSGVAAIGASILAMYMAFVEFVNEAWDRQLLSVFPVK 228
            ++T SSS   S    L ++   L S +  LLP+ +       PIAN APLGLLGFA VSILAA+PKLE+R+ TD   L+FVVA FLGG+ QV+AA+L+Y  N+LH A+TFALFGLHWSAQ+IL+ ++  +   F+    + +AAVYY  +T AT+ML + SF+ NRVL   LFFVIFAFGFDVPAAFGH WAEVGS +AAI AS++A+YMAFV+ VNEAW  QLLSVFPV+
Sbjct:   14 LTTSSSSIVKSQIAALQALQSLLPSDQAPLLPITIEKAVPLPPIANSAPLGLLGFALVSILAAVPKLENRSPTD--GLLFVVALFLGGIAQVLAAVLQYYINNLHGATTFALFGLHWSAQSILLFARDNNELTFSKSPDSSEAAVYYATITTATIMLWVASFKKNRVLCSALFFVIFAFGFDVPAAFGHRWAEVGSAIAAIAASLIALYMAFVDVVNEAWGTQLLSVFPVQ 242          
BLAST of Ggra2452.t1 vs. uniprot
Match: A0A2V3IR13 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR13_9FLOR)

HSP 1 Score: 168 bits (426), Expect = 1.840e-48
Identity = 96/230 (41.74%), Postives = 138/230 (60.00%), Query Frame = 0
Query:    5 SSSPRPSYEKLLPSIAKRL--------------DSLEKALLPLPVTTKSFRPIANPAPLGLLGFAAVSILAAIPKLEHRATDISPLIFVVAFFLGGMGQVIAALLEYTCNHLHAASTFALFGLHWSAQAILIASKSL-SLKDFTPIHAHDAAVYYTILTVATVMLTIPSFRMNRVLTVTLFFVIFAFGFDVPAAFGHHWAEVGSGVAAIGASILAMYMAFVEFVNEAWDR 219
            S++PRP+ ++ LPS+  RL              +S ++ LLPL   +KS+RPIANP+PLGL GFA    L +IPKL  R     PL F VA FLGG  Q++AA+  +  N+LHAA+TF L+G HW +QA+L    +  S+         D  VY  +L ++T +L IPSFR++R +  TLF +I  F FD  A F H WA + S ++ I A++++ YMA   FV +AW++
Sbjct:    6 SANPRPATKRPLPSVLLRLKNARVQAALLSTIMNSPKEPLLPLSYASKSYRPIANPSPLGLFGFAIAITLVSIPKLAARPPA-DPLFFAVALFLGGFAQILAAIYHFLLNNLHAANTFGLYGFHWCSQAVLEMVHAFPSIAAVPKADRIDMLVYNCLLAISTTVLWIPSFRIDRFVCTTLFLLIMVFTFDAVAVFDHRWAAIVSAISGILAALVSFYMALAIFVTDAWNK 234          
BLAST of Ggra2452.t1 vs. uniprot
Match: A0A2V3J528 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J528_9FLOR)

HSP 1 Score: 113 bits (283), Expect = 4.230e-27
Identity = 76/188 (40.43%), Postives = 105/188 (55.85%), Query Frame = 0
Query:   43 IANPAPLGLLGFAAVSILAAIPKLEHRATDISPLIFVVAFFLGGMGQVIAALLEYTCNHLHAASTFALFGLHWSAQAI--LIASKSLSLKDFTPIHAHDAAVYYTILTVATVMLTIPSFRMNRVLTVTLFFVIFAFGFDVPAAFGHHWAEVGSGVAAIGASILAMYMAFVEFVNEAWDRQLLSVFPVK 228
            IANPAPLGL+GFA   I+ AI KL +     +  I  +AFF GG  Q++A+ L++  N  H+A  FA+FG HW    +  ++ S + SL +  P     A  Y  +L   T +L IP+ R + V  +TL  V+ AF  D+PA +G   A V S V A+ AS  A+Y A  E VN AW R +L  F V+
Sbjct:    6 IANPAPLGLIGFATACIVNAIAKLCNTQQSSALFITGIAFFGGGGAQILASTLQFIRNEGHSALVFAVFGFHWWNTGLWYMMLSHNPSLAENVPNGVRAA--YPAVLATVTAILWIPTLRCSYVSAMTLALVVGAFVVDIPAQWGCRQAAVASAVFALAASGCAVYSAAAEVVNGAWKRDVLPRFYVR 191          
BLAST of Ggra2452.t1 vs. uniprot
Match: L0R6L9 (Uncharacterized protein n=1 Tax=Maridesulfovibrio hydrothermalis AM13 = DSM 14728 TaxID=1121451 RepID=L0R6L9_9DELT)

HSP 1 Score: 76.6 bits (187), Expect = 1.070e-13
Identity = 58/186 (31.18%), Postives = 89/186 (47.85%), Query Frame = 0
Query:   43 IANPAPLGLLGFAAVSILAAIPKLEHRAT--DISPLIFVVAFFLGGMGQVIAALLEYTCNHLHAASTFALFGLHWSAQAILIASKSLSLKDFTPIHAHDAAVYYTILT-VATVMLTIPSFRMNRVLT-VTLFFVIFAFGFDVPAAFGHHWAEVGSGVAAIGASILAMYMAFVEFVNEAWDRQLLSV 224
            +ANPAPLGL+GF   ++L  I    H A    IS ++  + FF GG+ QVIA ++E+   +    + F  +GL W     LI    L   D TP   H    +Y ++  + T+ + I +F+ N+VL  + L   +  F   +    G       +G   I     AMY+A  E +NE  DR +L +
Sbjct:    5 LANPAPLGLMGFGMTTVLLNI----HNAGFFPISAMVLAMGFFYGGIAQVIAGIMEFKKGNTFGTTAFTSYGLFWMTLVGLIVMPKLGWADPTP---HKFMGWYLVMWGIFTLFMYIGTFKSNKVLQFIFLSLAVLFFLLAIRDFTGSELIGTIAGYEGILCGASAMYLAMAEVINETHDRTVLPI 183          
BLAST of Ggra2452.t1 vs. uniprot
Match: M4U656 (Uncharacterized protein n=2 Tax=unclassified Psychromonas TaxID=2614957 RepID=M4U656_9GAMM)

HSP 1 Score: 76.3 bits (186), Expect = 1.580e-13
Identity = 59/189 (31.22%), Postives = 90/189 (47.62%), Query Frame = 0
Query:   43 IANPAPLGLLGFAAVSILAAIPKLEHRAT--DISPLIFVVAFFLGGMGQVIAALLEYTCNHLHAASTFALFGLHWSAQAILIASKSLSLKDFTPIHAHDAAVYYTILTVATVMLTIPSFRMNRVL-----TVTLFFVIFAFGFDVPAAFGHHWAEVGSGVAAIGASILAMYMAFVEFVNEAWDRQLLSV 224
            +ANP PLGL+GF   +IL  I    H A    +S +I  +    GG+ QVIA +LE+   +    + F  +G  W +  +LI   +L L D TP  A     Y T+  + T  + + + R+NR L     ++TL F + A      A  G  W    +G   I     A+Y+A  E +NE + R +L +
Sbjct:    7 LANPGPLGLMGFGMTTILLNI----HNAGFFPMSAMILAMGLCYGGLAQVIAGILEFKKGNTFGLTAFTSYGFFWISLVVLIVFPTLGLADATP--AGFMGCYLTMWGIFTAFMFVATLRINRGLQFIFASLTLLFALLA----AHAFTGIQWIGHLAGYEGIICGASAIYVAMAEVINEQYGRTILPI 185          
BLAST of Ggra2452.t1 vs. uniprot
Match: A0A1V4Z052 (Uncharacterized protein n=1 Tax=Methanocella sp. PtaU1.Bin125 TaxID=1811677 RepID=A0A1V4Z052_9EURY)

HSP 1 Score: 75.5 bits (184), Expect = 3.720e-13
Identity = 64/212 (30.19%), Postives = 97/212 (45.75%), Query Frame = 0
Query:   18 SIAKRLDSLEKALLPLPVTTKSFRPIANPAPLGLLGFAAVSILAAIPKLEHRATDISPLIFVVAFFLGGMGQVIAALLEYTCNHLHAASTFALFGLHWSAQAILIASKSLSLKDFTPIHAHDAAVYYTILTVATVMLTIPSFRMNRVL-----TVTLFFVIFAFGFDVPAAFGHHWAEVGSGVAAIGASILAMYMAFVEFVNEAWDRQLLSV 224
            +IA++     KA +P         P ANPAPLGL+GF A ++L  +      +T    +I  +  F GG+ QVIA LLE+   +      F  +GL W +   L+    L L D   +     A Y  I  + T  + I + + NR L     T+TL F + A G     A      +  +G   I   + A+Y+A  E +NE + R++L V
Sbjct:    2 AIAQQATEKSKATIP---------PGANPAPLGLMGFGATTVLLNLHNAGLISTGSLGMILAMGLFYGGVAQVIAGLLEFRKGNTFGTLAFTSYGLFWLSLVALLLFPDLGLADH--VDNVSMAAYLGIWGLFTAYMFIGTLKKNRALQFVFGTLTLLFFLLAVGDYTGIAA----IKTLAGYEGILCGLSAIYLACAEVLNETYGRRMLPV 198          
BLAST of Ggra2452.t1 vs. uniprot
Match: A0A2V2N7S9 (Uncharacterized protein n=1 Tax=Methanospirillum stamsii TaxID=1277351 RepID=A0A2V2N7S9_9EURY)

HSP 1 Score: 75.1 bits (183), Expect = 4.970e-13
Identity = 63/189 (33.33%), Postives = 94/189 (49.74%), Query Frame = 0
Query:   44 ANPAPLGLLGFAAVSILAAIPKLEHRATDISPLIFVVAFFLGGMGQVIAALLEYTCNHLHAASTFALFGLHWSAQAILIASKSLSLKDFTPIHAHDAAVYYTILTVATVMLTIPSFRMNRVLTVTLFFVIFAFGFDVPAAFGHHWAEVG-----SGVAAIGASILAMYMAFVEFVNEAWDRQLLSVFPV 227
            ANPAPLGL  F   +IL ++      A   SP IF +A F GG+ Q+IA + E+  N+     TF  FG  W + A +     L L    P    + A + ++  +  + L + +F+M+RVL VTLF V+    F V         E+G      GV  I A +LA+Y+   + +NE + ++   VFPV
Sbjct:   19 ANPAPLGLCAFGMTTILLSLHNAGLTAAG-SP-IFSMAMFYGGIAQIIAGIFEWKKNNTFGMVTFGSFGFFWISFAFIGFLPKLGLT--APPTNLELAAFLSVWGLFAMGLFVCTFKMHRVLQVTLFTVVLLVVFLVVGEI----TEIGLFSNLGGVTGIVAGLLALYIGMGQVINEVFGKK---VFPV 196          
BLAST of Ggra2452.t1 vs. uniprot
Match: A0A8E7B2P7 (Acetate uptake transporter n=2 Tax=Methanospirillum TaxID=2202 RepID=A0A8E7B2P7_9EURY)

HSP 1 Score: 75.1 bits (183), Expect = 4.970e-13
Identity = 63/187 (33.69%), Postives = 94/187 (50.27%), Query Frame = 0
Query:   44 ANPAPLGLLGFAAVSILAAIPKLEHRA--TDISPLIFVVAFFLGGMGQVIAALLEYTCNHLHAASTFALFGLHWSAQAILIASKSLSLKDFTPIHAHDAAVYYTILTVATVMLTIPSFRMNRVLTVTLFFVIFAFGFDVPAAF-GHHWAEVGSGVAAIGASILAMYMAFVEFVNEAWDRQLLSVFPV 227
            ANPAPLGL  F   +IL ++    H A  T I   I  +A F GG+ QVIA +LE+  N+     TF  FG  W + A ++    ++L    P +   AA +  +  +  + L I +FRM+RVL VTLFFV+      V     G     +  G   + A +LA+Y+   + +NE +  +   +FPV
Sbjct:   19 ANPAPLGLCAFGMTTILLSL----HNAGITAIGSPILAMALFYGGIAQVIAGILEWKKNNTFGMVTFGSFGFFWISFAFILLLPKMNLIG-APTNPELAA-FLGVWGLFALGLFICTFRMHRVLQVTLFFVVLLVALLVLNELTGIAMLGIFGGYVGLIAGLLALYIGMGQVINEVFGER---IFPV 196          
BLAST of Ggra2452.t1 vs. uniprot
Match: C6BZ82 (GPR1/FUN34/yaaH family protein n=4 Tax=Bacteria TaxID=2 RepID=C6BZ82_MARSD)

HSP 1 Score: 74.7 bits (182), Expect = 5.580e-13
Identity = 58/186 (31.18%), Postives = 89/186 (47.85%), Query Frame = 0
Query:   43 IANPAPLGLLGFAAVSILAAIPKLEHRAT--DISPLIFVVAFFLGGMGQVIAALLEYTCNHLHAASTFALFGLHWSAQAILIASKSLSLKDFTPIHAHDAAVYYTILT-VATVMLTIPSFRMNRVLTVTLFFVIFAFGFDVPAAF-GHHWAEVGSGVAAIGASILAMYMAFVEFVNEAWDRQLLSV 224
            +ANPAPLGL+GF   +IL  I    H A    IS +I  + FF GG+ QVIA ++E+   +    + F  +GL W     LI    + L + TP   H    +Y +L  + T+ + + + + N+VL    F +   F       F G H+    +G   I     A Y+A  E +NE + R +L +
Sbjct:    5 LANPAPLGLMGFGMTTILLNI----HNAGFFPISSMILAMGFFYGGIAQVIAGVMEFKKGNTFGTTAFTSYGLFWLTLVALIVMPKMGLAEPTP---HAFMGWYLLLWGIFTLFMFVGTLKGNKVLQFIFFSLTVLFFLLALRDFTGSHFIGTIAGWEGIVCGASAFYLAMAEVINEQYGRTVLPI 183          
BLAST of Ggra2452.t1 vs. uniprot
Match: A0A497H003 (Uncharacterized protein n=3 Tax=Thermoplasmata TaxID=183967 RepID=A0A497H003_9ARCH)

HSP 1 Score: 72.4 bits (176), Expect = 4.540e-12
Identity = 54/185 (29.19%), Postives = 90/185 (48.65%), Query Frame = 0
Query:   43 IANPAPLGLLGFAAVSILAAIPKLEHRATDISPLIFVVAFFLGGMGQVIAALLEYTCNHLHAASTFALFGLHW-SAQAILIASKSLSLKDFTPIH-AHDAAVYYTILTVATVMLTIPSFRMNRVLTVTLFFVIFAFGFDVPAAFGHHWAEVGSG---VAAIGASILAMYMAFVEFVNEAWDRQLL 222
            +ANPAPLGL+GF   ++L  I      A  +  +I  +  F GGM Q+ A LLEY   +    + F  +GL W S  A+LI    +    +T    A+    Y+ +  + T+++ I + +MN  L + +FF +F   + +       W  +  G   +  I   + A+Y+A  E +NE + R +L
Sbjct:    3 LANPAPLGLMGFGMTTVLLNIHNTNPGAFPLGSMILAMGIFYGGMAQIFAGLLEYRKGNTFGVTAFCSYGLFWISLVALLILPDLIDGGTYTAATPANFMGWYFFMWGLFTMLMFINTLKMNTGLQI-IFFTLFVLFYLLAL---RDWGVLSGGWIGIEGIICGLSAIYVAMAEVINETFGRTVL 183          
The following BLAST results are available for this feature:
BLAST of Ggra2452.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0E04.090e-7458.44Succinate-acetate/proton symporter SatP n=1 Tax=Gr... [more]
A0A2V3IR131.840e-4841.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5284.230e-2740.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
L0R6L91.070e-1331.18Uncharacterized protein n=1 Tax=Maridesulfovibrio ... [more]
M4U6561.580e-1331.22Uncharacterized protein n=2 Tax=unclassified Psych... [more]
A0A1V4Z0523.720e-1330.19Uncharacterized protein n=1 Tax=Methanocella sp. P... [more]
A0A2V2N7S94.970e-1333.33Uncharacterized protein n=1 Tax=Methanospirillum s... [more]
A0A8E7B2P74.970e-1333.69Acetate uptake transporter n=2 Tax=Methanospirillu... [more]
C6BZ825.580e-1331.18GPR1/FUN34/yaaH family protein n=4 Tax=Bacteria Ta... [more]
A0A497H0034.540e-1229.19Uncharacterized protein n=3 Tax=Thermoplasmata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000791Acetate transporter GPR1/FUN34/SatP familyPFAMPF01184Gpr1_Fun34_YaaHcoord: 37..216
e-value: 3.5E-21
score: 75.8
IPR000791Acetate transporter GPR1/FUN34/SatP familyPROSITEPS01114GPR1_FUN34_YAAHcoord: 45..54
NoneNo IPR availablePANTHERPTHR30178INNER MEMBRANE PROTEIN YAAHcoord: 38..224
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 160..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..209
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..95
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 210..231
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 122..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..121
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 185..190
NoneNo IPR availableTMHMMTMhelixcoord: 164..186
NoneNo IPR availableTMHMMTMhelixcoord: 191..213
NoneNo IPR availableTMHMMTMhelixcoord: 46..63
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 102..122
NoneNo IPR availableTMHMMTMhelixcoord: 73..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:361702..362397 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2452.t1Ggra2452.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 361702..362397 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2452.t1 ID=Ggra2452.t1|Name=Ggra2452.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=232bp
MSTISSSPRPSYEKLLPSIAKRLDSLEKALLPLPVTTKSFRPIANPAPLG
LLGFAAVSILAAIPKLEHRATDISPLIFVVAFFLGGMGQVIAALLEYTCN
HLHAASTFALFGLHWSAQAILIASKSLSLKDFTPIHAHDAAVYYTILTVA
TVMLTIPSFRMNRVLTVTLFFVIFAFGFDVPAAFGHHWAEVGSGVAAIGA
SILAMYMAFVEFVNEAWDRQLLSVFPVKSAN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000791Gpr1/Fun34/SatP