Ggra2113.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2113.t2
Unique NameGgra2113.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length418
Homology
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BLAST of Ggra2113.t2 vs. uniprot
Match: A0A2V3J194 (RNase III domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J194_9FLOR)

HSP 1 Score: 421 bits (1082), Expect = 9.640e-140
Identity = 222/418 (53.11%), Postives = 280/418 (66.99%), Query Frame = 0 
Query:    1 MPAAHAFVRHSLLHDVRMVQNANMEVPHFQHKLASELTALLKQPISFVASRKRTARSLMQHINCFEPLQCEILDLQRSRAERREHDLFYCAVAVRKRDELPQPFHERDFVCVASHFSVETARIAALEQAIDII--NAVRTPHTPEHLTDIKPLQLQMRASALGEQVPEMEVHFSSDGRWQYDADYHHMASLLERVGAPGVTAAWHQLDAQQIQQKIQTLRRDASEKDDGWDAHDGRYDA-FLGVRKSVERSDGRPQGEPAMCPSAVSKCMSIGTDIALNSQLARRHKAPFHAIEDAQRVVQLVTESVDELATLSVQQRSARVKAYHVLGSNAAKLWSVQSSMQDASQERLQVVAESERRGGMSHVMQRALLGDNGLVDVDDLRVNGAYVALGMCVDSVGCSSAMAWLSGAEQIATDGR 415
            +PAA  FV ++LL  V  VQNAN E+PHF+ +L   + AL+KQ ++F+ S KR A      +N FEPL+C +LDL    AE R H+LFYCAVA+R + +    F E DF+ VASHFSVETARIAAL QAI ++  N      +  H T  +P+ L+ R  AL E    +E +F+ DGRWQY ADYHH+A LL+RV  PG T     LDA QIQ++IQ L R A   D  W     ++   F     +   + GRP+GEP +CP+ + +C+S+G    L S+LAR H+APF  IE A RVV+ +T S DEL +L+V +RSAR KAYHVLG NA +LWSVQSSMQD S+ER+ VV+ SE + GMS VMQ ALLGD GL DV+DLRVN AYVA+GMCV S GC SAMAWLSGAEQIA D +
Sbjct:  192 LPAATDFVANTLLRRVEHVQNANAEIPHFEERLVHHVCALVKQQVAFITSPKRRA------VNTFEPLECHVLDLHPQLAENRAHELFYCAVALRNKQDSQNHFAESDFITVASHFSVETARIAALTQAIGMLSGNTAAAQSSQRHST--RPVPLRFRNDALDEPQHFLEANFTDDGRWQYHADYHHLAKLLQRVHTPGTTGL-ETLDASQIQERIQALGRSAEHDDQRWSEQGHKHHTLFQSWHSTAPHARGRPKGEPPVCPATIERCVSVGQQTQLGSELARNHEAPFLGIESASRVVEAITNSADELYSLTVPKRSARAKAYHVLGHNAVRLWSVQSSMQDCSEERVSVVSRSEEKAGMSRVMQSALLGDRGLADVEDLRVNRAYVAIGMCVHSAGCPSAMAWLSGAEQIAADSK 600
The following BLAST results are available for this feature:
BLAST of Ggra2113.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1949.640e-14053.11RNase III domain-containing protein n=1 Tax=Gracil... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:322127..323380 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2113.t2Ggra2113.t2Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 322127..323380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2113.t2 ID=Ggra2113.t2|Name=Ggra2113.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=418bp
MPAAHAFVRHSLLHDVRMVQNANMEVPHFQHKLASELTALLKQPISFVAS
RKRTARSLMQHINCFEPLQCEILDLQRSRAERREHDLFYCAVAVRKRDEL
PQPFHERDFVCVASHFSVETARIAALEQAIDIINAVRTPHTPEHLTDIKP
LQLQMRASALGEQVPEMEVHFSSDGRWQYDADYHHMASLLERVGAPGVTA
AWHQLDAQQIQQKIQTLRRDASEKDDGWDAHDGRYDAFLGVRKSVERSDG
RPQGEPAMCPSAVSKCMSIGTDIALNSQLARRHKAPFHAIEDAQRVVQLV
TESVDELATLSVQQRSARVKAYHVLGSNAAKLWSVQSSMQDASQERLQVV
AESERRGGMSHVMQRALLGDNGLVDVDDLRVNGAYVALGMCVDSVGCSSA
MAWLSGAEQIATDGRER*
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