Ggra1625.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1625.t1
Unique Name	Ggra1625.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	115

Homology

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BLAST of Ggra1625.t1 vs. uniprot
Match: A0A2V3INA2 (Protein CHROMATIN REMODELING 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INA2_9FLOR)

HSP 1 Score: 128 bits (321), Expect = 4.850e-32
Identity = 69/98 (70.41%), Postives = 83/98 (84.69%), Query Frame = 0

Query:   17 TKADGKEPDIAFKRQEPSAILRFGAEKLFAKEGLAENVEGESKIKDTEGIKDSTPNDSEPTANDTKKEDKDENAEDRRVLDADEIDELLARAPTDEAS 114
            +KADGKEPDIAFK++E SAILRFGAEKLFAKE L++N   + K +D   +K    + SEPTAND+KK+DKDENAE+RRVLDAD+IDELLARAPT+EAS
Sbjct: 1064 SKADGKEPDIAFKKEELSAILRFGAEKLFAKESLSDNAGDDGKTRDGAEVKSGNRDGSEPTANDSKKDDKDENAEERRVLDADDIDELLARAPTEEAS 1161

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BLAST of Ggra1625.t1 vs. uniprot
Match: R7Q275 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q275_CHOCR)

HSP 1 Score: 81.6 bits (200), Expect = 1.020e-15
Identity = 53/96 (55.21%), Postives = 65/96 (67.71%), Query Frame = 0

Query:   20 DGKEPDIAFKRQEPSAILRFGAEKLFAKEGLAENVEG-ESKIKDTEGIKDSTPNDSEPTANDTKKEDKDENAEDRRVLDADEIDELLARAPTDEAS 114
            DGK+   AFK++E SAILRFGAEKLF K+       G +SK K +   K++      PTA D   +DKD  AE+RRVL+ D+IDELLARAPTDEAS
Sbjct:  954 DGKDAQAAFKKEELSAILRFGAEKLFEKDKENTGDVGVDSKEKGSGEQKENGTGADAPTAQDVYDQDKDGKAEERRVLEVDDIDELLARAPTDEAS 1049

The following BLAST results are available for this feature:

BLAST of Ggra1625.t1 vs. uniprot

BLAST of Ggra1625.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3INA2	4.850e-32	70.41	Protein CHROMATIN REMODELING 5 n=1 Tax=Gracilariop...	[more]
R7Q275	1.020e-15	55.21	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000050_pilon	contig	tig00000050_pilon:56645..57102 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1625.t1	Ggra1625.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000050_pilon 56645..57102 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1625.t1 ID=Ggra1625.t1|Name=Ggra1625.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=115bp
MTRKRKVAPIALEKPRTKADGKEPDIAFKRQEPSAILRFGAEKLFAKEGL
AENVEGESKIKDTEGIKDSTPNDSEPTANDTKKEDKDENAEDRRVLDADE
IDELLARAPTDEAS*