Ggra1532.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1532.t1
Unique NameGgra1532.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length386
Homology
BLAST of Ggra1532.t1 vs. uniprot
Match: A0A2V3J0J6 (SPRY domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0J6_9FLOR)

HSP 1 Score: 146 bits (369), Expect = 4.790e-37
Identity = 131/368 (35.60%), Postives = 173/368 (47.01%), Query Frame = 0
Query:    8 IAVGLELRRTERPQQPPPRDGAHDNGGRGDGSDHHAAAAYQRAIMHRVIPCTLFDAVVQYEASADALCHQLGVGRSEALLLCFASRDDDDHYHAPPRAARQKRHAGTPQSVLDAAH------TPLDTARFERLFQPLSEHET----------RFGALLMRKLGALCERERARVRAPXXXXXXXXAEKRKRGSFCGFSRRVHGDISVVSDGVGIMKTGRGLYRSTKSVGCMDVRKRATYYYEAVVVDDVNAGGICIGVCSEQLALNQMLGSDELSCGLHSSGQLVRRGGSFEPFGARGFGRGDRVGVLVRRAHDGEQQLDVTLAFLLNGAVVGECVMKGLADVRWLWATVCLYREGSKVVLQCCRHDWS 359
             AVGLEL RTER  +       ++    GD             IMHR +  TLFD VV+Y  SA+ L          A  LC A  + D  Y     A ++K    +P SV++  H      +P    R+E      +  E           RF   L  +L  + E ER   R            KR  G  CGFSR VH  + VVSDG+  ++T  G+Y S  S G   + K+ TY+ E VV+DD  AGG+CIGV     +   ++G D+ S GLHSSG+LVR G  FEPFG +G+G GD VGV V    +     D+ + F +NG  VG        D + L A V + R+GSK +L CC   WS
Sbjct:   13 FAVGLELERTERASE-------YEEERNGD---------VIPQIMHRAVATTLFDCVVRYSISAETL----------AETLCMAKGNLDGLY---AEAKKEKVVKVSPASVVEGRHGRCTHASPHAAKRYEACLGAWNACEASAKRARTEVGRFAKELHSRLEQVAE-ERYGER-------FAGVAKRSGGERCGFSRSVHRGVFVVSDGIASVRTDTGIYGSCVSAGT--ITKQGTYF-EVVVLDDCEAGGVCIGVARAGKSPG-LVGGDKHSIGLHSSGKLVRNG-EFEPFG-QGYGSGDFVGVCVDVKDE-----DIGVQFSVNGRAVGGASFAS-RDAQ-LCAAVSMLRKGSKTLLLCCAAQWS 330          
BLAST of Ggra1532.t1 vs. uniprot
Match: A0A7S0T6T5 (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6T5_9RHOD)

HSP 1 Score: 71.2 bits (173), Expect = 5.720e-10
Identity = 81/307 (26.38%), Postives = 134/307 (43.65%), Query Frame = 0
Query:   51 IMHRVIPCTLFDAVVQYEASADALCHQLGVGRS--EALLLCFASRDDDDHYHAPPRAARQKRHAGTPQSVLDAAHTPLDTARFERLFQPLSEHETRFGALLMRKLGALCERERARVRAPXXXXXXXXAEKRKRGSFCGFSR-RVHGDISV-VSDGVGIMKTGRGLYRSTKSVGCM-DVRKRA--TYYYEAVVVDDVN------AGGICIGVCSEQLALNQMLGSDELSCGLHSSGQLVRRGGSFEPFGARGFGRGDRVGVLVRRAHDGEQQLDVTLAFLLNGAVVGECVMK-GLADVRWLWATVCLY 343
            IMH  I   LF A V   A  + L H   + +   EA  +  A + +D+  H       Q     + +  L A          +RL   ++ +E  F              E +R+            ++  R S CGFSR R H D+++   + +       GL+RS ++  C+ D    A  + Y E +V+   +      AGG+C+G+ ++ LA+N+M G    S GL++SG +V  G  F    +  +  GD VGVL  R +  +Q+    ++F +NG  V   V++ G   ++ L+ T  LY
Sbjct:   91 IMHTKISDKLFVAEVVQSAPLELLAHTFQMSQRFIEASWITSALQHEDEVGHED--TTEQLDEGQSDEPPLSALSQDQRRKLHQRLSTSVNSYELSF--------------ELSRIAKATAAGASKRNKRTTRTSRCGFSRTRRHSDVALSCRNSLAAKANSTGLFRSIQAQSCLFDTNGSAGSSSYVEFMVLPSTSSPRKSDAGGVCVGLATDALAVNKMPGMARDSVGLYASGDVVLDGKHFAAGASAQYTCGDTVGVLAERIN--QQRGASKVSFFVNGVHVNSTVLQLGPPGIK-LYPTASLY 378          
The following BLAST results are available for this feature:
BLAST of Ggra1532.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0J64.790e-3735.60SPRY domain-containing protein n=1 Tax=Gracilariop... [more]
A0A7S0T6T55.720e-1026.38Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003877SPRY domainSMARTSM00449SPRY_3coord: 226..357
e-value: 0.0095
score: 23.7
IPR043136B30.2/SPRY domain superfamilyGENE3D2.60.120.920coord: 169..364
e-value: 2.0E-20
score: 75.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..42
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 189..351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:335539..336696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1532.t1Ggra1532.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 335539..336696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1532.t1 ID=Ggra1532.t1|Name=Ggra1532.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=386bp
MCSSTQRIAVGLELRRTERPQQPPPRDGAHDNGGRGDGSDHHAAAAYQRA
IMHRVIPCTLFDAVVQYEASADALCHQLGVGRSEALLLCFASRDDDDHYH
APPRAARQKRHAGTPQSVLDAAHTPLDTARFERLFQPLSEHETRFGALLM
RKLGALCERERARVRAPPPPPQQQRAEKRKRGSFCGFSRRVHGDISVVSD
GVGIMKTGRGLYRSTKSVGCMDVRKRATYYYEAVVVDDVNAGGICIGVCS
EQLALNQMLGSDELSCGLHSSGQLVRRGGSFEPFGARGFGRGDRVGVLVR
RAHDGEQQLDVTLAFLLNGAVVGECVMKGLADVRWLWATVCLYREGSKVV
LQCCRHDWSVRAQQLAAVLGDAASEVHVSCICCSS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003877SPRY_dom
IPR043136B30.2/SPRY_sf
IPR013320ConA-like_dom_sf