Ggra1532.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1532.t1
Unique NameGgra1532.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length386
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:335539..336696 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1532Ggra1532Gracilaria gracilis GNS1m malegenetig00000844_pilon 335539..336696 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1532.t1.stop1Ggra1532.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000844_pilon 335539..335541 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1532.t1.CDS1Ggra1532.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000844_pilon 335539..336696 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1532.t1.exon1Ggra1532.t1.exon1Gracilaria gracilis GNS1m maleexontig00000844_pilon 335539..336696 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1532.t1.start1Ggra1532.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000844_pilon 336694..336696 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1532.t1Ggra1532.t1Gracilaria gracilis GNS1m malepolypeptidetig00000844_pilon 335539..336696 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1532.t1 ID=Ggra1532.t1|Name=Ggra1532.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=386bp
MCSSTQRIAVGLELRRTERPQQPPPRDGAHDNGGRGDGSDHHAAAAYQRA
IMHRVIPCTLFDAVVQYEASADALCHQLGVGRSEALLLCFASRDDDDHYH
APPRAARQKRHAGTPQSVLDAAHTPLDTARFERLFQPLSEHETRFGALLM
RKLGALCERERARVRAPPPPPQQQRAEKRKRGSFCGFSRRVHGDISVVSD
GVGIMKTGRGLYRSTKSVGCMDVRKRATYYYEAVVVDDVNAGGICIGVCS
EQLALNQMLGSDELSCGLHSSGQLVRRGGSFEPFGARGFGRGDRVGVLVR
RAHDGEQQLDVTLAFLLNGAVVGECVMKGLADVRWLWATVCLYREGSKVV
LQCCRHDWSVRAQQLAAVLGDAASEVHVSCICCSS*
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spliced messenger RNA

>Ggra1532.t1 ID=Ggra1532.t1|Name=Ggra1532.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1158bp|location=Sequence derived from alignment at tig00000844_pilon:335539..336696- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGTTCTTCTACTCAACGAATTGCCGTGGGGTTGGAGCTGCGCCGCAC
CGAGCGGCCGCAACAGCCGCCACCCCGCGACGGCGCGCACGACAACGGCG
GCCGCGGCGACGGCAGCGACCACCACGCCGCCGCGGCGTACCAGCGCGCC
ATCATGCACCGCGTCATCCCGTGCACGCTGTTCGACGCCGTGGTGCAGTA
CGAGGCGTCTGCCGACGCGCTGTGCCACCAGCTGGGCGTCGGGCGCAGCG
AGGCGCTGCTGCTATGCTTTGCGTCGCGCGACGACGACGACCACTACCAC
GCGCCGCCGCGCGCCGCGCGCCAGAAGCGCCACGCCGGCACGCCGCAGTC
CGTGCTGGACGCCGCGCACACGCCGCTGGACACGGCGCGCTTCGAGCGTT
TGTTCCAGCCGCTGTCCGAGCACGAGACGCGCTTCGGCGCGCTGCTCATG
CGCAAGCTTGGCGCGCTGTGCGAGCGCGAGCGCGCGCGCGTGCGCGCGCC
GCCGCCGCCGCCGCAGCAGCAGCGCGCGGAGAAGCGCAAGCGCGGCAGCT
TTTGCGGCTTTTCGCGGCGCGTGCATGGCGACATCTCCGTGGTGAGCGAC
GGCGTGGGCATCATGAAGACGGGGCGCGGGCTGTATCGCAGCACCAAGAG
CGTGGGGTGCATGGACGTGAGGAAACGCGCCACGTACTACTACGAGGCGG
TGGTGGTGGACGACGTGAACGCCGGCGGCATTTGCATCGGCGTGTGTTCG
GAGCAGCTGGCGCTCAACCAGATGCTGGGGTCGGACGAGCTGAGCTGCGG
GCTGCACAGCTCGGGGCAGCTGGTGCGGCGCGGCGGCTCGTTCGAGCCGT
TTGGCGCGCGCGGCTTTGGACGCGGCGATCGCGTGGGCGTGCTGGTGCGG
CGGGCGCACGACGGCGAGCAGCAGCTGGATGTGACGCTGGCGTTCCTGCT
CAATGGCGCGGTGGTGGGCGAGTGCGTGATGAAGGGGCTGGCCGACGTGC
GCTGGCTGTGGGCCACGGTGTGCCTGTACCGCGAGGGCAGTAAGGTGGTG
CTGCAGTGCTGCCGGCACGACTGGAGCGTGCGCGCGCAGCAGCTGGCGGC
AGTGCTGGGCGACGCCGCCTCGGAGGTGCACGTCAGCTGCATCTGCTGCT
CCAGTTAA
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protein sequence of Ggra1532.t1

>Ggra1532.t1 ID=Ggra1532.t1|Name=Ggra1532.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=386bp
MCSSTQRIAVGLELRRTERPQQPPPRDGAHDNGGRGDGSDHHAAAAYQRA
IMHRVIPCTLFDAVVQYEASADALCHQLGVGRSEALLLCFASRDDDDHYH
APPRAARQKRHAGTPQSVLDAAHTPLDTARFERLFQPLSEHETRFGALLM
RKLGALCERERARVRAPPPPPQQQRAEKRKRGSFCGFSRRVHGDISVVSD
GVGIMKTGRGLYRSTKSVGCMDVRKRATYYYEAVVVDDVNAGGICIGVCS
EQLALNQMLGSDELSCGLHSSGQLVRRGGSFEPFGARGFGRGDRVGVLVR
RAHDGEQQLDVTLAFLLNGAVVGECVMKGLADVRWLWATVCLYREGSKVV
LQCCRHDWSVRAQQLAAVLGDAASEVHVSCICCSS*
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mRNA from alignment at tig00000844_pilon:335539..336696-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1532.t1 ID=Ggra1532.t1|Name=Ggra1532.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1158bp|location=Sequence derived from alignment at tig00000844_pilon:335539..336696- (Gracilaria gracilis GNS1m male)
ATGTGTTCTTCTACTCAACGAATTGCCGTGGGGTTGGAGCTGCGCCGCAC
CGAGCGGCCGCAACAGCCGCCACCCCGCGACGGCGCGCACGACAACGGCG
GCCGCGGCGACGGCAGCGACCACCACGCCGCCGCGGCGTACCAGCGCGCC
ATCATGCACCGCGTCATCCCGTGCACGCTGTTCGACGCCGTGGTGCAGTA
CGAGGCGTCTGCCGACGCGCTGTGCCACCAGCTGGGCGTCGGGCGCAGCG
AGGCGCTGCTGCTATGCTTTGCGTCGCGCGACGACGACGACCACTACCAC
GCGCCGCCGCGCGCCGCGCGCCAGAAGCGCCACGCCGGCACGCCGCAGTC
CGTGCTGGACGCCGCGCACACGCCGCTGGACACGGCGCGCTTCGAGCGTT
TGTTCCAGCCGCTGTCCGAGCACGAGACGCGCTTCGGCGCGCTGCTCATG
CGCAAGCTTGGCGCGCTGTGCGAGCGCGAGCGCGCGCGCGTGCGCGCGCC
GCCGCCGCCGCCGCAGCAGCAGCGCGCGGAGAAGCGCAAGCGCGGCAGCT
TTTGCGGCTTTTCGCGGCGCGTGCATGGCGACATCTCCGTGGTGAGCGAC
GGCGTGGGCATCATGAAGACGGGGCGCGGGCTGTATCGCAGCACCAAGAG
CGTGGGGTGCATGGACGTGAGGAAACGCGCCACGTACTACTACGAGGCGG
TGGTGGTGGACGACGTGAACGCCGGCGGCATTTGCATCGGCGTGTGTTCG
GAGCAGCTGGCGCTCAACCAGATGCTGGGGTCGGACGAGCTGAGCTGCGG
GCTGCACAGCTCGGGGCAGCTGGTGCGGCGCGGCGGCTCGTTCGAGCCGT
TTGGCGCGCGCGGCTTTGGACGCGGCGATCGCGTGGGCGTGCTGGTGCGG
CGGGCGCACGACGGCGAGCAGCAGCTGGATGTGACGCTGGCGTTCCTGCT
CAATGGCGCGGTGGTGGGCGAGTGCGTGATGAAGGGGCTGGCCGACGTGC
GCTGGCTGTGGGCCACGGTGTGCCTGTACCGCGAGGGCAGTAAGGTGGTG
CTGCAGTGCTGCCGGCACGACTGGAGCGTGCGCGCGCAGCAGCTGGCGGC
AGTGCTGGGCGACGCCGCCTCGGAGGTGCACGTCAGCTGCATCTGCTGCT
CCAGTTAA
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Coding sequence (CDS) from alignment at tig00000844_pilon:335539..336696-

>Ggra1532.t1 ID=Ggra1532.t1|Name=Ggra1532.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1158bp|location=Sequence derived from alignment at tig00000844_pilon:335539..336696- (Gracilaria gracilis GNS1m male)
ATGTGTTCTTCTACTCAACGAATTGCCGTGGGGTTGGAGCTGCGCCGCAC
CGAGCGGCCGCAACAGCCGCCACCCCGCGACGGCGCGCACGACAACGGCG
GCCGCGGCGACGGCAGCGACCACCACGCCGCCGCGGCGTACCAGCGCGCC
ATCATGCACCGCGTCATCCCGTGCACGCTGTTCGACGCCGTGGTGCAGTA
CGAGGCGTCTGCCGACGCGCTGTGCCACCAGCTGGGCGTCGGGCGCAGCG
AGGCGCTGCTGCTATGCTTTGCGTCGCGCGACGACGACGACCACTACCAC
GCGCCGCCGCGCGCCGCGCGCCAGAAGCGCCACGCCGGCACGCCGCAGTC
CGTGCTGGACGCCGCGCACACGCCGCTGGACACGGCGCGCTTCGAGCGTT
TGTTCCAGCCGCTGTCCGAGCACGAGACGCGCTTCGGCGCGCTGCTCATG
CGCAAGCTTGGCGCGCTGTGCGAGCGCGAGCGCGCGCGCGTGCGCGCGCC
GCCGCCGCCGCCGCAGCAGCAGCGCGCGGAGAAGCGCAAGCGCGGCAGCT
TTTGCGGCTTTTCGCGGCGCGTGCATGGCGACATCTCCGTGGTGAGCGAC
GGCGTGGGCATCATGAAGACGGGGCGCGGGCTGTATCGCAGCACCAAGAG
CGTGGGGTGCATGGACGTGAGGAAACGCGCCACGTACTACTACGAGGCGG
TGGTGGTGGACGACGTGAACGCCGGCGGCATTTGCATCGGCGTGTGTTCG
GAGCAGCTGGCGCTCAACCAGATGCTGGGGTCGGACGAGCTGAGCTGCGG
GCTGCACAGCTCGGGGCAGCTGGTGCGGCGCGGCGGCTCGTTCGAGCCGT
TTGGCGCGCGCGGCTTTGGACGCGGCGATCGCGTGGGCGTGCTGGTGCGG
CGGGCGCACGACGGCGAGCAGCAGCTGGATGTGACGCTGGCGTTCCTGCT
CAATGGCGCGGTGGTGGGCGAGTGCGTGATGAAGGGGCTGGCCGACGTGC
GCTGGCTGTGGGCCACGGTGTGCCTGTACCGCGAGGGCAGTAAGGTGGTG
CTGCAGTGCTGCCGGCACGACTGGAGCGTGCGCGCGCAGCAGCTGGCGGC
AGTGCTGGGCGACGCCGCCTCGGAGGTGCACGTCAGCTGCATCTGCTGCT
CCAGTTAA
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