Ggra1523.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1523.t1
Unique NameGgra1523.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length568
Homology
BLAST of Ggra1523.t1 vs. uniprot
Match: A0A2V3J1S9 (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1S9_9FLOR)

HSP 1 Score: 733 bits (1892), Expect = 1.620e-260
Identity = 373/572 (65.21%), Postives = 450/572 (78.67%), Query Frame = 0
Query:    1 MVRQHEALACAIARYHFKPIVAEVVRLLCLHPGSTLVALARLASPYFEAACARSQNQHRVVGDHQRLDFVRDSLAVLCQHGIVLHDELLNLQISKRNPLSNGASPLFNPRTRIQYYCDVNVLLYRPRIPLYLGFARRRFGEFGHAVLSALLERGRLTSAQLFKCTLAPKMAEFGISEAAVQACLIDMVQSGVVHWCGKRKRRSSLRAKLQIQKEEATVESVGSKRPNP-----DVVHYDDDYDEXXXXXXXDNRERIQIGRGDNMRSVIVPDKDNDIDIWGVCYWHLNREFRNECCLMVVGTRVRSELCVQILRVGLQIALSREDCQQPSDDMETAEVHTDDIKKGLEEFDLFVSAQEFWNAALVLAKHDPPIVLAVPPHAPTHLKFVPGRLVAETRQKTAEEFIMSRFGSTGRRIFRALALEGAMEEKMLAEKCMQPLKVVREHLFRMYQDRVIVTQEVPRSNDQQRASNWFYLWKVNTFSIHRSLLEVMYKTLLNLFLQFEMLDKDSKTPEEQKKLRNRETLLVSSILRVDQSVMVMRDFGPITAVYFPSKYEVLDGYIIHSKKRRRRVT 567
            MVR  EALACAIARYHFKPIVAE+VRLL +HP STL+ L+ LASP+F++  ARS NQH  +   +RLD+VR+SLAVL QHGIV ++E          P S        P T I YYC+++ LLYRPRIPLYLGF RRRFGE G +VL  L ERGRLTS+ +F C+L+ K+AE  I++A  +ACL DM++SG++HWCGKRK RSSL  K      EA + +VG+KRPNP      + H+  D   XXXXXXX NR  IQIGRGD++R+V  P+K ND DIWG+C+WHLNREFR ECC +VV  R+ +EL V ILRVGL+IALSREDC QPS+D ETAE+H DDI+KGLE+F + V    FW+AA +L  HDPP V+AVP  AP+HLKFVPGR+VAETR KTAEE I+SR+G  GRRIF+ALALEGAMEE+MLAEKCM PLKV+REH+FRMYQDR+I TQEVPRSNDQQRASNWFYLW+VN  SIHR+LL++MYKTLLNLFLQ+E+L++D+KTPEE+ K + RE L+++ ILRVDQSVMVMRDFG +TA YFPSKYEVLDGYI+ SKKRRRR T
Sbjct:    1 MVRHEEALACAIARYHFKPIVAEIVRLLFIHPASTLLTLSSLASPFFDSLSARSANQHHPISHLKRLDYVRNSLAVLLQHGIVTYEERFTSAPPPALPPSQSDLVRHTP-THIVYYCNIHALLYRPRIPLYLGFVRRRFGELGQSVLRTLFERGRLTSSIIFGCSLSHKVAEHAITDADAEACLTDMLKSGLLHWCGKRKPRSSLLEKTISTHFEAQLHNVGAKRPNPFSANNHLPHHQLDXXXXXXXXXXHNRPMIQIGRGDHVRTVGAPNKHNDKDIWGICFWHLNREFRVECCTLVVSNRIPNELAVLILRVGLEIALSREDCLQPSEDFETAEIHIDDIRKGLEDFGMSVGTHHFWDAAQLLTNHDPPFVIAVPAPAPSHLKFVPGRIVAETRAKTAEELILSRYGGVGRRIFQALALEGAMEERMLAEKCMLPLKVMREHVFRMYQDRIIATQEVPRSNDQQRASNWFYLWRVNLLSIHRNLLQIMYKTLLNLFLQYELLNRDNKTPEEKNKFQKREALIIACILRVDQSVMVMRDFGAVTAAYFPSKYEVLDGYIMPSKKRRRRAT 571          
BLAST of Ggra1523.t1 vs. uniprot
Match: R7Q9L1 (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9L1_CHOCR)

HSP 1 Score: 474 bits (1219), Expect = 2.070e-158
Identity = 260/582 (44.67%), Postives = 352/582 (60.48%), Query Frame = 0
Query:    6 EALACAIARYHFKPIVAEVVRLLCLHPGSTLVALARLASPYFEAACARSQNQHRVVGDHQRLDFVRDSLAVLCQHGIVLHDELLN---LQISKRNPLSNGASPLFNPR--------TRIQYYCDVNVLLYRPRIPLYLGFARRRFGEFGHAVLSALLERGRLTSAQLFKCTLAPKMAEFGISEAAVQACLIDMVQSGVVHWCGKRKRRSSLRAKLQIQKEEATVESVGS------KRPNPDVVHYDDDYDEXXXXXXX-----DNRERIQIGRGDNMRSVIVPDKDNDIDIWGVCYWHLNREFRNECCLMVVGTRVRSELCVQILRVGLQIALSREDCQQPSDDMETAEVHTDDIKKGLEEFDLFVSAQEFWNAALVLAKHDPPIVLAVPPHAPTHLKFVPGRLVAETRQKTAEEFIMSRFGSTGRRIFRALALEGAMEEKMLAEKCMQPLKVVREHLFRMYQDRVIVTQEVPRSNDQQRASNWFYLWKVNTFSIHRSLLEVMYKTLLNLFLQFEMLDKDSKTPE--EQKKLRNRETLLVSSILRVDQSVMVMRDFGPITAVYFPSKYEVLDGYIIHSKKRR 563
            EALAC++ R  F    AE +R+L   PGS+   +   A+P  E     +    +  G       +RDSLAVL QHGI    E  N    + S     S     +   R        T   YY      L+R R+PLYLGFARRR+G+ G   + A  ERGRLTS QLF   L   + +  I+E+  +ACL DM +SG++ W G+R     L        E +  + + +      KR  P     + D DE            + RE I+IGR  +   V  P + ND+D+W +C+WHLNREFRNECC +VV  RV++ + V ILR GL++AL  EDCQ PSDD ETAE+    I++ L+E D  V   +FW A  +L +  P  V+ +P  +PT L+F+ GRLV++ RQKT E+ I+SR+G+ GRR+FRALA++G ME+K +AEKCM PLKV REHLFRMYQDR++V QEVPRS+DQQRASNW+YLWKVN   ++RS+  +MYKT+LNLFL+ E L+    T    +QK+LR ++ LL+ SI+R+DQ +MVMRDFGPITA Y P++Y ++DG +   KKRR
Sbjct:    4 EALACSMVRSQFGEATAETLRILLASPGSSFAQIIAKATPLIETL---ANADTKTSGPQTCHALIRDSLAVLLQHGIAYAVERFNGPKEEASTNGDRSEKEDQIDVERHRKRSRTLTHSAYYARGEYALFRSRLPLYLGFARRRYGDVGETAVRAFFERGRLTSHQLFSSVLTSVLIDLDITESDAEACLNDMAKSGIMRWHGRRDMNGPLNGNSPEADESSRNDYISNQKDMNGKRSRPSESDDESDDDEPMLQGSGSQSGAEERECIRIGRCHHSIVVGAPSRKNDMDVWNICFWHLNREFRNECCAIVVQGRVQNHVAVGILRAGLRMALEEEDCQAPSDDFETAEIEVATIEEQLKE-DGAVGNHDFWEALQLLMEQTPTFVVGIPEKSPTSLRFITGRLVSDARQKTLEDLILSRYGAVGRRVFRALAVDGGMEDKAVAEKCMLPLKVAREHLFRMYQDRILVMQEVPRSHDQQRASNWYYLWKVNAMGVYRSMTALMYKTVLNLFLRLESLEATKSTARGADQKQLRLQKELLMGSIVRMDQCIMVMRDFGPITAQYLPARYRIIDGPLAKPKKRR 581          
BLAST of Ggra1523.t1 vs. uniprot
Match: DNA-directed RNA polymerase III subunit RPC3-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF13B58 (DNA-directed RNA polymerase III subunit RPC3-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF13B58)

HSP 1 Score: 77.8 bits (190), Expect = 1.860e-11
Identity = 105/457 (22.98%), Postives = 184/457 (40.26%), Query Frame = 0
Query:   68 DFVRDSLAVLCQHGIVLHDELLNLQISKRNPLSNGASPLFNPRTRIQYYCDVNVLLYRPRIPLYLGFARRRFGEFGHAVLSALLERGRLTSAQLFKCTLAPKMAE-FGISEAAVQACLIDMVQSGVVHWCGKRKRRSSLRAKLQIQKEEA----TVESVGSKRPNPDVVHYDDDYDEXXXXXXXDNRERIQIGRGDNMRSVIVPDKDNDIDIWGVCYWHLNREFRNECCLMVVGTRVRSELCVQILRVGLQIALSREDCQQPSDDMETAEVHTDDIKKGLEEFDLFVSAQEFWNAALVLAKHDPPIVLAVPPHAPTHLKFVPGRLVAETRQKTAEEFIMSRFGSTGRRIFRALALEGAMEEKMLAEKCMQPLKVVREHLFRMYQDRVIVTQEVPRSNDQQRASNWFYLWKVNTFSIHRSLLEVMYKTLLNLFLQFEMLDKDSKTPEEQKKLRNRETL 519
            + V+ SL  L QH  V ++      ++K+N        L+N          ++ +L R R P Y+  A+  FG  G  ++  +L+ G L  +++    ++    E     E+ V++   D+V S   H+  + +  +S     +          T +  G KR        DDD           +  + Q     +    I  D  ++  +W   +   ++EF +E  +  V  +V  +    I++  LQ+     D   P+    T  V   +I + L       +AQ     +L L+      V                + +    Q T E  +  RFGS   RIFR L L+  ME+K + E  M   K  +E L++++ +R I  QE+PR++D    S  FYL+ V    + R L+E  Y+ L NL     M  + ++  E ++ +   E L
Sbjct:   48 ELVQKSLCCLIQHHFVSYE------VNKKNV------SLYN--------AWISNILLRARAPRYIYCAKCLFGYSGELIVDEILQHGSLEMSKVVTKVMSHLTEENIDFDESEVKSTFADLVMS---HFLQRVRTETSDNTSTEDDMYSLPPGLTFQGQGVKRKRS----IDDD----------GHPTKRQKTEAKSTAGDICSDIKDEGILWKTNFSRFHQEFIDEAIVSAVIKKV-DKFAGDIVKAMLQLNELNRDPLSPT----TQAVSLHEISQNLTMIPKMENAQVTQYLSL-LSDEKENFVSKTGERGGGMYCINMQKCIDALCQNTVESVVQERFGSRCFRIFRLLLLKKHMEQKQIGELAMISSKDAKEFLYKLFAERFIAMQEIPRTSDYA-PSRTFYLFSVELPQLSRMLIEKSYQALGNL-----MARRQTEVQENRRLVEKEERL 455          
BLAST of Ggra1523.t1 vs. uniprot
Match: A0A2B4T2I7 (DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4T2I7_STYPI)

HSP 1 Score: 76.3 bits (186), Expect = 5.830e-11
Identity = 100/458 (21.83%), Postives = 182/458 (39.74%), Query Frame = 0
Query:   68 DFVRDSLAVLCQHGIVLHDELLNLQISKRNPLSNGASPLFNPRTRIQYYCDVNVLLYRPRIPLYLGFARRRFGEFGHAVLSALLERGR-LTSAQLFKCTLAPKMAEFGISEAAVQACLIDMVQSGVVHWCGKRKRRSSLRAKLQIQKEEA-------TVESVGSKRPNPDVVHYDDDYDEXXXXXXXDNRERIQIGRGDNMRSVIVPDKDNDIDIWGVCYWHLNREFRNECCLMVVGTRVRSELCVQILRVGLQIALSREDCQQPSDDMETAEVHTDDIKKGLEEFDLFVSAQEFWNAALVLAKHDPPIVLAVPPHAPTHLKFVPGRLVAETRQKTAEEFIMSRFGSTGRRIFRALALEGAMEEKMLAEKCMQPLKVVREHLFRMYQDRVIVTQEVPRSNDQQRASNWFYLWKVNTFSIHRSLLEVMYKTLLNLFLQFEMLDKDSKTPEEQKKLRNRE 517
            D V+ +L  L QH  V        +++KRN     A               ++ +L+R R P Y+   +  FG  G  ++  + + G  + S  + K     +       E  +Q C  ++V++  +      +             ++         ++  GSKR                        +R + G      S    +  +D  +W V +   ++ F +E  + VV  +V  +   +I++  L+++    D   P+  ++T  +H  +I + L        AQ     +L+  + D  +V                + V    Q   E  +  RFGS   RIFR L L+  ME+K + E  M P K V+E L++++ +R I  QE+PR++D    S   YL+ VN   + R LLE  Y+ L NL     M  ++++  E ++ +  +E
Sbjct:   48 DQVQKALCCLIQHHFV------TFEVNKRNVTLYSAL--------------ISNILFRLRAPRYIYCVKSIFGYTGELIIDEIFQHGSAIMSTVVDKVARHLEEDNLDSDEDEIQVCFANLVKNHFLQRLKPTRNEEQSMGNSSYNDDDLYALPPGMNLQGHGSKRKRS-------------IADEGQTTKRQKTGAS-YTASAKGSELSDDGILWQVNFARFHQHFIDENIVTVVTKKV-DKFAGEIVKTMLKLSELARDPLSPT--LQTVSLH--EISQNLSVTPKMEKAQIVQYLSLLTDEKD-NLVSKTGESGGGMYCINMQKCVDTLCQNVIESIVQERFGSRCFRIFRLLLLKKHMEQKQIGELAMIPSKDVKELLYKLFAERFIALQEIPRASDYA-PSRTVYLFSVNLPQVSRMLLEKSYQALGNL-----MSRRETELHEHRRLIEKKE 459          
BLAST of Ggra1523.t1 vs. uniprot
Match: A0A5J5AFJ9 (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5AFJ9_9ASTE)

HSP 1 Score: 72.0 bits (175), Expect = 1.300e-9
Identity = 110/517 (21.28%), Postives = 202/517 (39.07%), Query Frame = 0
Query:   70 VRDSLAVLCQHGIVLHDELLNLQISKRNPLSNGASPLFNPRTRI--QYYCDVNVLLYRPRIPLYLGFARRRFGEFGHAVLSALLERGRLTSAQLFKCTLAPKMAEFGISEAAVQACLIDMVQSGVVHWC----------------GKRKRRSSLRAKLQIQKEEATVE--SVGSKRPNPDVVHYDDDYDEXXXXXXXDNRERIQIGRGDNMRSVIVPDKDNDID----------IWGVCYWHLNREFRNECCLMVVGTRVRSELCVQILRVGLQIALSRE-----DCQQPSDDMETAEVHTDDIKKGLEEFDLFVSAQEFWNAALVLAKHDPPIVLAVPPHAPTHLKFVPGRLVAETRQKTAEEFIMSRFGSTGRRIFRALALEG-AMEEKMLAEKCMQPLKVVREHLFRMYQDRVIVTQEVPRSNDQQRASNWFYLWKVNTFSIHRSLLEVMYKTLLNLFLQFEMLDKDSKT----PEEQ---------KKLRNRETLLVSSILRVDQSVMVMRDF 537
            V++SL VL QH  V   +   +Q         G    F   T+I  QY    +++++  R P +L       G+    +   LL+ GRL+  Q+ +          G S+ AVQ     +V +  V  C                 K++   S + + Q+ +   T+E  ++    P   +    + + E          +   +  G+  +     D D DI+          +W   +    R  R++ C+  V TR      + +L   L+   S E     +C  P   M T     +++ K   E    ++ +    A + L  H P I   +       LK     ++   + +  E  ++ R+G    RIFR L+  G  +E   +++      K   + L+++++D  +  +++     +Q     F LWKVN  S+   +L+ MY   LNL L+     +  K     P E+         K+LR    +L SS++++D ++M+  DF
Sbjct:   51 VKNSLLVLIQHNCV---QAFTIQ-------QEGG---FQEETKIITQYMVLFDIIIHHMRFPKFLAIVSEDLGKECEEIFEGLLQHGRLSVNQILERHKQTSNQSEGNSQEAVQENFSRLVNARYVERCPAHQPFLAPLTEEETAAKKQGAKSAKTRRQMAEASETLEQRALAEAAPMESIRFLVESFAETKVDEQNSEEDPHSVTVGEKRKQ---GDLDLDIEDGTRKKKKEVLWRANFEEFVRHLRHKACIANVRTRFDDGAGI-VLNAMLEATRSTETKVKMECSVPLS-MNTI---FEEVMKS--EAGRSMTLERVRAALVQLGCHLPAI--GIDETYSIDLK----NIIELAQNEEVESIVLKRYGREAYRIFRLLSKAGHLLETDKISDTTFVDKKDASKILYKLWKDDYLHMEKIATYGGKQSQ---FLLWKVNKKSLWEHVLDEMYHAGLNLRLRTAYEQEQEKEILQIPREKLVGELAKRYKRLRKVRIVLESSLMKLDDAIMLFHDF 535          
BLAST of Ggra1523.t1 vs. uniprot
Match: DNA-directed RNA polymerase III subunit RPC3-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3708D (DNA-directed RNA polymerase III subunit RPC3-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3708D)

HSP 1 Score: 70.9 bits (172), Expect = 2.970e-9
Identity = 45/132 (34.09%), Postives = 71/132 (53.79%), Query Frame = 0
Query:  393 QKTAEEFIMSRFGSTGRRIFRALALEGAMEEKMLAEKCMQPLKVVREHLFRMYQDRVIVTQEVPRSNDQQRASNWFYLWKVNTFSIHRSLLEVMYKTLLNLFLQFEMLDKDSKTPEEQKKLRNRETLLVSSI 524
            Q   E  +  RFGS   RIFR L L+  ME+K + E  M P K  +E L++++ +R I  QE+PR++D    S  FYL+ V+   + R L+E  Y+ L NL      + +     +E ++L  +E  L ++I
Sbjct:  341 QNVIESIVQERFGSRCFRIFRLLLLKKHMEQKQIGELAMIPSKDAKELLYKLFAERFIALQEIPRASDYA-PSRTFYLFSVDLRQLSRMLIEKSYQALGNL------MSRRQTEVQEHRRLVEKEERLEATI 465          
BLAST of Ggra1523.t1 vs. uniprot
Match: K7LL22 (DNA-directed RNA polymerase III subunit RPC3 n=9 Tax=Glycine subgen. Soja TaxID=1462606 RepID=K7LL22_SOYBN)

HSP 1 Score: 69.7 bits (169), Expect = 6.770e-9
Identity = 134/578 (23.18%), Postives = 219/578 (37.89%), Query Frame = 0
Query:    1 MVRQHEA-LACAIARYHFKPIVAEVVRLLCLHPGSTLVALARLASPYFEAACARSQNQHRVVGDHQRLDFVRDSLAVLCQHGIVLHDELLNLQISKRNPLSNGASPLFNPRTRIQYYCDVNVLLYRPRIPLYLGFARRRFGEFGHAVLSALLERGRLTSAQLFKCTLAPKMAEFGISEAAVQACLIDMVQSGVVHWCGK-------------RKRRSSLRAKLQIQKEEATVESVGSKRPNPDVVHYDDDYDEXXXXXXXDNRERIQIGRGDNMRSVIVPDKDNDIDIWGVCYWHLN-----REFRNECCLMVVGTRVRSELCVQILRV-----GLQIALSREDCQQPSDDMETAEVHTDDIKKGLEEFDLFVSAQEFWNAALVLAKHDPPIVLAVPPHAPTHLKFVPGRLVAETRQKTAEEFIMSRFGSTGRRIFRALALEGAMEEK-MLAEKCMQPLKVVREHLFRMYQDRVIVTQEVPRSNDQQRASNWFYLWKVNTFSIHRSLLEVMYKTLLNLFLQ--FEMLDKDS---KTPEEQ-----------KKLRNRETLLVSSILRVDQSVMVMRDF 537
            MV QH    A  +   HF  IVA+V   L +H   TL  L R                          D VR+SL VL QH  V         +S      + A  L   R R QY    + +L+R R P +L    R+  E    +L  LL  GRLT  Q+       K  E  +    V+  L  ++ +  V  C                ++R +  AK+    E      V +  P  DV+ +    D            R  + R  N     +   + ++   G   W  N     R  R++  +  V T+        +  V      +Q  +  E+    S D    EV   D  + +          +   A+LV     P ++L         LK    +++   R +  E  ++ R+G+ G RIFR LA +    +   +A   +   K   + L+++++D  +  ++V  +   ++ +    +WKVN   +   +L+ MY   LNL L+  FE  +KD    K P+++           KKL N   LL SS++++D ++M+  DF
Sbjct:    1 MVTQHGIKFAVHLITKHFGKIVAKVCENLFIHGPLTLDQLVRYTD--------------------LTKDQVRNSLLVLVQHNCV------QAFVSAPQDDDDDADRL---RVRTQYLVLFDSILHRLRFPKFLEIVSRKLDEECVKLLDGLLRDGRLTLKQMVDRESQRK--ENAVPTKVVRETLCKLLTARFVERCPAPEPVVSTSFKETTTRKRGAKSAKIFEAPETLEQRVVDAAVPG-DVIRFSLAAD-----------TRCSVDRETNSDDAQMISVEEEVAKEGQILWRANFEEFIRHLRHKVLIENVRTQHDDGTATVLSAVLEATRSVQKKVKTENSVPLSLDTIITEVMKTDTGRTM--------TVDRIRASLVQLGCSPSMILEE--SYSIDLK----KIIEPARNEEVESIVLKRYGTDGYRIFRLLAKDCCFHDTDQIAASTLVEKKEASKLLYKLWKDNYLYMEKVGATVGAKQTT--ILMWKVNKPLLWEYVLDEMYHAALNLSLRMAFEQ-EKDEELLKVPKDKRQGPGPLQKKYKKLLNVWLLLGSSLMKLDDALMLFHDF 518          
BLAST of Ggra1523.t1 vs. uniprot
Match: A0A8J4RPD2 (Uncharacterized protein n=5 Tax=Fagaceae TaxID=3503 RepID=A0A8J4RPD2_9ROSI)

HSP 1 Score: 69.7 bits (169), Expect = 6.820e-9
Identity = 108/515 (20.97%), Postives = 204/515 (39.61%), Query Frame = 0
Query:   70 VRDSLAVLCQHGIVLHDELLNLQISKRNPLSNGASPLFNPRTRIQYYCDVNVLLYRPRIPLYLGFARRRFGEFGHAVLSALLERGRLTSAQLFKCTLAPKMAEFGISEAAVQACLIDMVQSGVVHWCGK--------------RKRRSSLRAKLQIQKE---EATVESVGSKRPNPDVVHYDDDYDEXXXXXXXDNRERIQIGRGDNMRSVIVPDKDNDIDIWGVCYWHLN-REFRNECCLMVVGTRVRSEL---CVQILRVGLQ--------------IALSREDCQQPSDDMETAEVHT-DDIKKGLEEFDLFVSAQEFWNAALVLAKHDPPIVLAVPPHAPTHLKFVPGRLVAETRQKTAEEFIMSRFGSTGRRIFRALALEGAM-EEKMLAEKCMQPLKVVREHLFRMYQDRVIVTQEVPRSNDQQRASNWFYLWKVNTFSIHRSLLEVMYKTLLNLFLQ--FEMLDKDSK--------TPEEQKKLRNRETLLVSSILRVDQSVMVMRDF 537
            V++SL +L QH  V         +  +    +G      P+   QY    + +L+R R P +L    R   +    +L  LL+ GRLT  Q+ +   A    + G  E  V+  L  ++ +  V  C                 K+R +  AK+  + E   +  + + G        +  + ++D        D+   I +G     R  +  D+++  +   V  W  N  EF      M     VR+ L    V++L+  L               + LS ++  +     E   V T DD++  L +     SA+   ++  +  K                      +++   +    E  ++ R+G    RIFR L+  G + E   +++      K   + L++M++D  +  +++  + ++        LWKVN   +   +L+ M+   LNL L+  +E  DK+ +        T EE++K +N   LL SS+L++D ++M+  +F
Sbjct:   51 VKNSLLILIQHNCVQA-----FTLESQGGFGDG------PKANTQYLALFSNILHRMRFPKFLEIVSRELDQECKELLEGLLQNGRLTLVQMVER--AKSKRKDGCREDVVREGLTKLLAAHFVECCPAPEPLVPEQVKVETTSKKRGTKSAKINEESETIEQRVLAAAGPMEAQRFSMITNTEFDVNGETSTDDSPSLI-VGEK-RKRDSLELDRESTAEEGEVVLWRANFEEFLRRLRHMACIENVRASLDDGAVKVLKAKLDATRGLEKKVKTEKSVPLSLDNIFEEVIKSEEGRVMTLDDVRASLVQLGCPASARGTADSYSIDLK----------------------KIIESAQNDEVESIVLKRYGRDAYRIFRLLSKNGRLVETDKISDTTFVEKKDAPKILYKMWKDEYLHMEKLVLAPNRN-----ILLWKVNKRPLWEHVLDEMFHAALNLSLRAAYEW-DKEKEVINPLEAMTKEERQKQKNIRILLDSSLLKLDDAIMLFHNF 522          
BLAST of Ggra1523.t1 vs. uniprot
Match: G3ML89 (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Amblyomma maculatum TaxID=34609 RepID=G3ML89_AMBMU)

HSP 1 Score: 68.2 bits (165), Expect = 2.070e-8
Identity = 90/418 (21.53%), Postives = 185/418 (44.26%), Query Frame = 0
Query:  108 NPRTRIQYYCDVNVLLYRPRIPLYLGFARRRFGEFGHAVLSALLERGRLTSAQLFKCTLAPKMAEFGISEAAVQACLIDMVQSG-VVHWCGKRKRRSSLRAKLQIQKEEATVESVGSKRPNPDVVHYDDDYDEXXXXXXXDNRERIQIGRGDNMRSVIVPDKDNDIDIWGVCYWHLNREFRNECCLMVVGTRVRSELCVQILRVGLQIALSREDCQQPSDDMETAEVHTDDIKKGLEEFDLFVSAQEFWNAALVLAKHDPPIVLAVPPHAPTHLKFVPGRLVAETRQKTAEEFIMSRFGSTGRRIFRALALEGAMEEKMLAEKCMQPLKVVREHLFRMYQDRVIVTQEVPRSNDQQRASNWFYLWKVNTFSIHRSLLEVMYKTLLNLFLQFEMLDKDSKTPEEQKKLRNRETLLVSSI 524
            +PR   +Y    + +L   R P Y+  A+  +G+ G  ++  +L  GRL  + + +  L          E  V+   +D+VQ+  +V            +    + +EE        K P   +     +Y E          ++I+    +N+     PD+    + W V +   ++  R++  +  V  R+ S+   +++R  L+++ +R   +    D+ +  V   +I + L++ ++ +S+QE  ++ L L   D  +++               R V    +      +  RFG+   RIFR L ++   E+K + E  M P +  +E  ++M++++ I+ QE+PR+ D    S   YL+ V+   + R +LE  Y+ L NL  + + + ++ K   ++K+   R  L+V S+
Sbjct:   68 HPRGFAKYSIHADRVLCMLRYPRYIYCAKLLYGDAGEFIIEEVLLNGRLCMSAVIQKVLDRLQGNSTAEE--VKQKFVDLVQTNFLVRVPYPDPNVEGTKIPTLVLREEDV-----HKIPQVKLYLMKQNYGEASLEPPA---KKIKT---ENLDGEKQPDEK---EYWRVNFDRFHQHLRDQLVVQAVSKRMGSKA-GEVVRTMLRLSETRSHPK----DVFSVPVSRSEIHQALKK-EINISSQEL-DSYLSLIADDALLLVRRTDERGGMFSVNLERAVRLLAEAVLTSIVQDRFGAKSCRIFRLLLVKKYTEQKQIEELAMIPARDAKEWTYKMFEEKFIMAQELPRTPDYA-PSRMIYLFYVDIPQLSRRVLEWCYQALTNLVQRRDHITQEHKRLVDKKQ---RVDLIVLSM 458          
BLAST of Ggra1523.t1 vs. uniprot
Match: A0A6P8IH03 (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IH03_ACTTE)

HSP 1 Score: 67.0 bits (162), Expect = 4.770e-8
Identity = 42/127 (33.07%), Postives = 69/127 (54.33%), Query Frame = 0
Query:  393 QKTAEEFIMSRFGSTGRRIFRALALEGAMEEKMLAEKCMQPLKVVREHLFRMYQDRVIVTQEVPRSNDQQRASNWFYLWKVNTFSIHRSLLEVMYKTLLNLFLQFEMLDKDSKTPEEQKKLRNRETL 519
            Q T +  +  R+GS   RIFR L  +  +E+K + E  M P K  +E L++++ +++I  QEVP++ D    S  FYL+ VN   + R  LE  Y+T  NL     M  + S+T + ++ L  +E +
Sbjct:  328 QHTLQSILQERYGSNALRIFRLLLQKDHLEQKQIGELSMIPSKDAKELLYKLFSEKIINMQEVPKTADYA-PSRTFYLFSVNLKQLSRMHLERCYQTQGNL-----MSRRQSETQDNRRLLEKQERM 448          
The following BLAST results are available for this feature:
BLAST of Ggra1523.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3J1S91.620e-26065.21DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
R7Q9L12.070e-15844.67DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
DNA-directed RNA polymerase III subunit RPC3-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF13B581.860e-1122.98DNA-directed RNA polymerase III subunit RPC3-like ... [more]
A0A2B4T2I75.830e-1121.83DNA-directed RNA polymerase III subunit RPC3 n=2 T... [more]
A0A5J5AFJ91.300e-921.28DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
DNA-directed RNA polymerase III subunit RPC3-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3708D2.970e-934.09DNA-directed RNA polymerase III subunit RPC3-like ... [more]
K7LL226.770e-923.18DNA-directed RNA polymerase III subunit RPC3 n=9 T... [more]
A0A8J4RPD26.820e-920.97Uncharacterized protein n=5 Tax=Fagaceae TaxID=350... [more]
G3ML892.070e-821.53DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
A0A6P8IH034.770e-833.07DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..91
e-value: 1.7E-6
score: 30.1
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 385..474
e-value: 6.3E-23
score: 82.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..241
IPR039748DNA-directed RNA polymerase III subunit RPC3PANTHERPTHR12949RNA POLYMERASE III DNA DIRECTED -RELATEDcoord: 4..537
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 395..475

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:314082..315785 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1523.t1Ggra1523.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 314082..315785 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1523.t1 ID=Ggra1523.t1|Name=Ggra1523.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=568bp
MVRQHEALACAIARYHFKPIVAEVVRLLCLHPGSTLVALARLASPYFEAA
CARSQNQHRVVGDHQRLDFVRDSLAVLCQHGIVLHDELLNLQISKRNPLS
NGASPLFNPRTRIQYYCDVNVLLYRPRIPLYLGFARRRFGEFGHAVLSAL
LERGRLTSAQLFKCTLAPKMAEFGISEAAVQACLIDMVQSGVVHWCGKRK
RRSSLRAKLQIQKEEATVESVGSKRPNPDVVHYDDDYDEDDYDDEDDNRE
RIQIGRGDNMRSVIVPDKDNDIDIWGVCYWHLNREFRNECCLMVVGTRVR
SELCVQILRVGLQIALSREDCQQPSDDMETAEVHTDDIKKGLEEFDLFVS
AQEFWNAALVLAKHDPPIVLAVPPHAPTHLKFVPGRLVAETRQKTAEEFI
MSRFGSTGRRIFRALALEGAMEEKMLAEKCMQPLKVVREHLFRMYQDRVI
VTQEVPRSNDQQRASNWFYLWKVNTFSIHRSLLEVMYKTLLNLFLQFEML
DKDSKTPEEQKKLRNRETLLVSSILRVDQSVMVMRDFGPITAVYFPSKYE
VLDGYIIHSKKRRRRVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR039748RPC3
IPR036390WH_DNA-bd_sf