Ggra1517.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra1517.t1 vs. uniprot
Match: R7QN10 (tRNA pseudouridine synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN10_CHOCR) HSP 1 Score: 367 bits (942), Expect = 4.880e-124 Identity = 178/289 (61.59%), Postives = 220/289 (76.12%), Query Frame = 0
Query: 17 KRFRARVAYDGTRYKGWQFQYECRSIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRVNPIRTIWSADVVHEGEDMYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFESRDRRITPKSAPAHGLCLEQVFYDDWD 305
+R RARVAYDGT Y+GWQ+Q + ++QG LE A++R+ G +RVVGASRTD+GVHARGQ MHFDIP A R+ + +KF +TLNQ+LP DVR+ L +AP V +P K + + RPWH+IY + GKLYTYR S + DP+ RLYRYHEWRA KFGFSE++LREA+ KFVGSHDFSAFTN+++PPPG PPV NPIR I SA V+ EG MYRIEF INGA+YRMIRNIMGTIL+VSCG ++IS +D F S+DRR+ PKSAPA GLCLE+V YD+W+
Sbjct: 54 QRIRARVAYDGTLYRGWQYQTDQPTVQGALEDALRRKFGHTIRVVGASRTDTGVHARGQAMHFDIPIARALRDGESERKFHYTLNQMLPPDVRVPVLSVAPTV----VPC-KVTDECGNVGIATRPWHAIYNAKGKLYTYRISTSPVFDPLGRLYRYHEWRATKFGFSEELLREASAKFVGSHDFSAFTNSTNPPPGFVPPVLSNPIRHIHSATVIPEGAGMYRIEFVINGAMYRMIRNIMGTILSVSCGSMDISNIDHLFASKDRRLVPKSAPAKGLCLEKVIYDEWE 337
BLAST of Ggra1517.t1 vs. uniprot
Match: A0A2V3J0L1 (tRNA pseudouridine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0L1_9FLOR) HSP 1 Score: 323 bits (828), Expect = 1.400e-108 Identity = 158/209 (75.60%), Postives = 180/209 (86.12%), Query Frame = 0
Query: 11 SQKCPTKRFRARVAYDGTRYKGWQFQYECRSIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVR 219
S+K TKRFRARVAYDGT +KGWQFQ E RSIQGE+EKAI+R++ VRVVGASRTDSGVHARGQ +HFD+PE+ A+RE +MQKF+FTLNQ+LPNDV LT LE+AP V H AIPMFKQAS T ++ KLRPWHSI+CSTGKLYTYRFSIA LDPM RLYRYHEWRA++FGFSE LREAT++F+GSHDFSAFTNAS PPPGITP R
Sbjct: 10 SKKHDTKRFRARVAYDGTNFKGWQFQQEERSIQGEIEKAIERKLCTRVRVVGASRTDSGVHARGQSIHFDVPEQKAAREMCNMQKFEFTLNQLLPNDVILTKLELAPHVIHTAIPMFKQASLKTIQEPKLRPWHSIFCSTGKLYTYRFSIATNLDPMDRLYRYHEWRASRFGFSEQRLREATERFLGSHDFSAFTNASHPPPGITPHYR 218
BLAST of Ggra1517.t1 vs. uniprot
Match: A0A5J4YW71 (tRNA pseudouridine synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW71_PORPP) HSP 1 Score: 233 bits (594), Expect = 4.880e-71 Identity = 124/306 (40.52%), Postives = 187/306 (61.11%), Query Frame = 0
Query: 7 TNSRSQKCPTKRFRARVAYDGTRYKGWQFQYECR-SIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKD-----MQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRVNPIRTIWSADVVHEGED--MYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFESRDRRITPKSAPAHGLCLEQVFYDDW 304
T +R + T R R VAYDGT ++GWQ+Q R S+Q LEK RR+ RVVGASRTD+GVHARGQ HFDIPEE+ + + + + +F +N++LP ++++ +E+AP + +P + +L+PWHSIYC+ K+Y+Y+ A +DP++RLYR+HE++A D+ A ++FVG+HDFS+F N S V NP+RT+ S V+ + D + +E + GALY+M+RN++G L V+ + +D +RDRRI PK+APA GLCL+++FY D+
Sbjct: 86 TEARVLRGETYRCRMTVAYDGTEFRGWQYQINTRNSVQATLEKVFSRRLNGFTRVVGASRTDTGVHARGQVAHFDIPEEIPKEDLQQDDSSGLSRLEFQVNRMLPANLQVLRMEVAPPPSLVKLPSGE----------RLKPWHSIYCAQHKIYSYKIMFATCMDPLERLYRHHEYQAC----DTDLFEAALQRFVGTHDFSSFANRLS-----HGEVVRNPVRTVHSVRVIRDERDPRLMTVEVDLQGALYKMVRNMIGAALHVARHDMPPEHIDVLLGARDRRIAPKAAPARGLCLDRIFYADY 372
BLAST of Ggra1517.t1 vs. uniprot
Match: M2WXR7 (tRNA pseudouridine synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WXR7_GALSU) HSP 1 Score: 231 bits (589), Expect = 7.860e-71 Identity = 120/287 (41.81%), Postives = 178/287 (62.02%), Query Frame = 0
Query: 18 RFRARVAYDGTRYKGWQFQYECRSIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRVNPIRTIWSADVVHEGEDMYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFESRDRRITPKSAPAHGLCLEQVFYDDW 304
R+R RVAYDGT + GWQFQ + RS+QG LE+ + +R+ +R++GA RTDSGVHARGQ HFD D ++TLN++L D+R+ L+ + S D + WH+I+ + K+Y+YRFSIAK LDP++R +R+H +R + L +ATK F+G+HDF++F + ++ + N RTI+ D+VHE D YR+E+ +NGALYRMIRNI ++ V+ +L + +++ ++DRR PK+APAHGLCLE+V YDD+
Sbjct: 73 RYRLRVAYDGTDFSGWQFQEKRRSVQGVLEQVLSKRLNRSIRIIGAGRTDSGVHARGQVAHFDTVS------FSDCPHLEYTLNRMLSGDIRVYDLQQKEPI---------------SSDPR-NNWHAIFSARKKVYSYRFSIAKELDPLERRFRFHFYRRCNL----ERLYDATKVFLGTHDFTSFCSRNTE----MKEMEKNMCRTIYRIDLVHESGDSYRLEYELNGALYRMIRNITSSLFFVASDELTLDDLNEILHAKDRRRAPKAAPAHGLCLERVIYDDY 329
BLAST of Ggra1517.t1 vs. uniprot
Match: A0A8J2SCD1 (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCD1_9STRA) HSP 1 Score: 202 bits (513), Expect = 4.270e-60 Identity = 123/293 (41.98%), Postives = 171/293 (58.36%), Query Frame = 0
Query: 18 RFRARVAYDGTRYKGWQFQYECRSIQGELEKAIQRRV-GELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKY--LDPMQRLYRYHE-WRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRVNPIRTIWSADVVHEGEDMYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFESRD-RRITP-KSAPAHGLCLEQVFYDDW 304
R+ RVAYDGT + GWQ Q R+++GEL KA R G V ++GASRTDSGVHARGQ H D+PEE+A D+ + LN++LP+DVR+ C+ AP +PWH+I CSTGK Y+YR + A+Y DP++RLYR H + F +L A ++ G DF AF N ++P P+ ++ IR I S + EG Y ++ ++GALYRM+RN++G +A G+L++ +D+ R RR P KSAPA GLCLE+VFYDD+
Sbjct: 17 RYALRVAYDGTHFNGWQHQPNARTVEGELRKAFTTRFDGANVPLLGASRTDSGVHARGQAAHVDLPEEVA-----DVDLLKHQLNRMLPDDVRINCVREAPPGGE-------------------KPWHAIACSTGKRYSYRMT-ARYGSQDPLERLYRAHVCYEDLDFA----LLSNALQRCRGRFDFKAFAN-NAPTQN---PLEMDTIREIRSIEAEDEGFGDYTVQIELDGALYRMVRNVVGACVACGTGKLKLDELDELLSGRKTRRDNPTKSAPARGLCLEEVFYDDF 276
BLAST of Ggra1517.t1 vs. uniprot
Match: M1VG01 (tRNA pseudouridine synthase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VG01_CYAM1) HSP 1 Score: 202 bits (515), Expect = 1.210e-58 Identity = 128/303 (42.24%), Postives = 185/303 (61.06%), Query Frame = 0
Query: 18 RFRARVAYDGTRYKGWQFQYECRS---IQGELEKAIQRRVGEL---VRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAK-FGFSEDMLREATKKFVGSHDFSAFTNASSPP-PGITPPVRVNPIRTIWSADVVHEGED----MYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFE--SRDRR-ITP--KSAPAHGLCLEQVFYDD 303
R+RA VAYDGT + G+Q Q + R+ IQG LE A+Q+R+G +VVGA RTD+GVHARGQ +HFDIPE+ A+ A + + + LN++LP +++ +E++P +P ++R +L PWH+IY + GK Y YR S ++DP+ Y Y ++R + + ++ ML+ FVG+HDF AF ASSPP ++ + +RTI V D +++ EF ++GALYRMIRNIMGT LAV+ G+L+ + V + SR R I P K APAHGLCLE+V+Y D
Sbjct: 99 RYRAVVAYDGTDFHGFQRQAKSRATPTIQGRLEAALQQRLGGYPWHCQVVGAGRTDAGVHARGQVIHFDIPEQKAATSAFEPSRLEHALNRLLPRTIQVRAMEVSPPPAWYLVP--------STRTYQLLPWHAIYRAQGKRYVYRLSAGAWIDPLYHRYAYTDYRQMQHWAVAQQMLQT----FVGTHDFGAF--ASSPPGKADRHQIQRSTVRTIRRISVEPSPVDSIVPVWKFEFELDGALYRMIRNIMGTFLAVARGELDDALVVDALQQGSRGRALIAPRVKPAPAHGLCLERVYYAD 387
BLAST of Ggra1517.t1 vs. uniprot
Match: D7FS62 (tRNA pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS62_ECTSI) HSP 1 Score: 195 bits (496), Expect = 5.960e-56 Identity = 111/293 (37.88%), Postives = 172/293 (58.70%), Query Frame = 0
Query: 18 RFRARVAYDGTRYKGWQFQ-YECRSIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRV---NPIRTIWSADVVHEGEDMYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFESR--DRRITPKSAPAHGLCLEQVFYDDW 304
RF +RV YDGT YKG+Q Q + ++QG LEKA+ R V VV A RTD+GVH+ GQ +HFD+P +D+ + +++NQ++P DVR+ + +AP + + K PW S+ + GK Y+YR + + P+ RLYR H +AA + D+L + K VG HDF+ F+N + + + N +RT++SA+++ EG R++F ++GALYRM+RN++G +LAV+ G+LE +D+ F +R D R+ +APAHGL L+ V YD +
Sbjct: 138 RFVSRVMYDGTNYKGFQLQGHGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNA-----NEDLSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQVE-------------KGWPWSSMLNARGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTIPKLVGKHDFAGFSNEVTKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEIFATRVRDSRLI-YAAPAHGLTLDTVLYDGY 411
BLAST of Ggra1517.t1 vs. uniprot
Match: A0A7J7INL2 (tRNA pseudouridine synthase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INL2_9RHOD) HSP 1 Score: 194 bits (493), Expect = 1.240e-55 Identity = 129/314 (41.08%), Postives = 179/314 (57.01%), Query Frame = 0
Query: 7 TNSRSQKCPTKRFRARVAYDGTRYKGWQFQYECRS---IQGELEKAIQRRVGEL---VRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRV--NPIRTIWSADVVHEGED----MYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFES--RDRRITP---KSAPAHGLCLEQVFYDD 303
T +R+Q R+RA VAYDGT + G+Q Q R+ IQ +LE +QRR+G +VVGA RTD+GVHARGQ +HFDIPE +A A + + Q +NQ+LP +++ LE+AP+ P I ++ K+ PWH+IY + GKLY YR ++ DP+ + Y Y E R+ + L +A FVG+HDF AF ++ PP RV + +RTI +V E +++ F ++GALYRMIRN++G LAV+ G LE V K E R R + K APA GLCLEQV+Y D
Sbjct: 63 TLTRAQHTELVRYRAVVAYDGTDFHGFQRQSNSRAYPTIQSQLELVLQRRLGCCQWRCQVVGAGRTDAGVHARGQVVHFDIPESMAESVAFEPLQLQHAMNQLLPRTIQIRALEVAPL------PQLCLIRHI--QEYKILPWHAIYHARGKLYVYRMFAGQWRDPLHQRYVYSEHRSLPRWTDAESLLQA---FVGTHDFGAFAHS---PPNKADRQRVLHSTVRTIRRIVLVPRDEGGIVPVWQFHFELDGALYRMIRNLIGAFLAVAKGDLEPELVLKALEQGLRGRALIAARVKPAPAQGLCLEQVYYAD 362
BLAST of Ggra1517.t1 vs. uniprot
Match: A0A7S0NAW7 (tRNA pseudouridine synthase (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NAW7_9EUKA) HSP 1 Score: 190 bits (482), Expect = 2.550e-55 Identity = 117/296 (39.53%), Postives = 160/296 (54.05%), Query Frame = 0
Query: 19 FRARVAYDGTRYKGWQFQYECRSIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAK---YLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSP-----PPGITPPVRVNPIRTIWSADVVHEGEDMYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFESRDRRITPKSAPAHGLCLEQVFYD-DWD 305
FRAR+ YDG Y G QFQ SI EL+ A+ +R + VRV+ A RTD+GVHARGQ +HFD+ + R + D + FQ +N +LP DVRL LE A RD + R WHS+Y +TGKLY+YRF +DP QRLYR+ E R D ++ A FVG HDF++F N + P G+ P ++ +R + S + EG+ R + + GALY+ +RN++G + V G+ E + V R R PK APA GL LE V+Y+ WD
Sbjct: 1 FRARLMYDGLAYAGLQFQENAPSIANELQVALAKRTQQDVRVIAAGRTDTGVHARGQAIHFDVDGD---RFSDDPEAFQTAVNCMLPQDVRLVQLERAQ-----------------ERDAEGRRWHSMYWATGKLYSYRFHSGHPIGCMDPTQRLYRHQERRGP---LCLDRMQAAADYFVGEHDFASFANKGATGVRQSPAGVRLP-SLSTVRRVRSITIHDEGDGYARADVHLKGALYKQVRNMVGLLFEVGDGRREATDVPDLMALRSRTGLPKPAPALGLTLESVYYNVGWD 272
BLAST of Ggra1517.t1 vs. uniprot
Match: A0A7S4MSL3 (tRNA pseudouridine synthase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSL3_9STRA) HSP 1 Score: 187 bits (475), Expect = 3.120e-53 Identity = 122/302 (40.40%), Postives = 172/302 (56.95%), Query Frame = 0
Query: 18 RFRARVAYDGTRYKGWQFQYECRSIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDI-PEELASREAK--DMQKFQFTLNQILPNDVRL--TCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRVNPIRTIWSADVVHEGEDMYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKF------------FESRDRRITPKSAPAHGLCLEQVFYD 302
R+RARVAYDGT + GWQ Q + R+IQG++E + RR VR+VGA RTD+GVHARGQ HFD+ +E+ ++K D+Q Q +LN +L D+R+ TC P +K I R+ K WH IY + KLY+YR S A YLDP+ R R H + ++LR A + F G+HDF AF A + V + IRT+++ ++V EG YR++F + GALY+M+RN+MGT LAV+ G+LE + +F F +D + P A GL LE V++D
Sbjct: 90 RYRARVAYDGTGFNGWQTQAKGRTIQGDIEAVLSRRFDRPVRIVGAGRTDAGVHARGQAFHFDLRADEIGVADSKCFDLQ-LQRSLNSMLRRDIRVWNTCQAPPPS-------SYKNWEGI-ERNHK---WHVIYNAEKKLYSYRISTAPYLDPLLRHTRTHVFDPTNI----ELLRTALQHFEGTHDFRAFAGAIDANERKSGKV-LGTIRTVYAVNLVEEGNGNYRVDFLLKGALYKMVRNMMGTALAVAQGRLEEDRLLEFLHHDSSEGKVLQFVRKDNKCKP--AAPEGLTLEHVYFD 372 The following BLAST results are available for this feature:
BLAST of Ggra1517.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra1517.t1 ID=Ggra1517.t1|Name=Ggra1517.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=307bpback to top |