Ggra1114.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1114.t1
Unique NameGgra1114.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length230
Homology
BLAST of Ggra1114.t1 vs. uniprot
Match: A0A2V3J6K2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6K2_9FLOR)

HSP 1 Score: 232 bits (592), Expect = 7.790e-74
Identity = 127/229 (55.46%), Postives = 157/229 (68.56%), Query Frame = 0
Query:    1 MSTIFYIAAARVADHCCFAQHVVPCSNHTAAAVFEQKLQKILLSPQLKHNNRLTIVDDHQRHIHYEADPALIFLVVTAASYPQRTAFELLSAARTDFDQLFAPEMGKATPGALSKRARPVLERLVQHYHHVPNLDKISNVQHQVEQVKGMMQHNIQSALHNTDNLETLLDISDNMKNEAYSFNRSTAQVKNRMQWKDFQMKLLIAFLVLLIVSIVIASVVVHRKGQQQA 229
            M+TI YIAAAR+ D C FA+  +  S     AVF++KL K+L+S  LK+N RLTI DD   HIHYEADPA I+LVVTAA YPQRTAF LL+  R  FD+ ++ ++  A    LSK ARP+       Y      DKI+NV+ QV+QVKGMM+ NI++AL NT+NLETLLDISDNMKNEA SFNRST  VK RMQWK+ +MK+LI         +V  S +V RK QQ+A
Sbjct:    1 MTTIKYIAAARIPDRCRFAEFTLLESREIPRAVFDEKLDKVLVSSHLKNNTRLTITDDIG-HIHYEADPAFIYLVVTAADYPQRTAFRLLADVRAQFDKSYSRQISHAKTSELSKTARPLFAEFADKYQDPAQFDKIANVEQQVDQVKGMMRDNIEAALKNTENLETLLDISDNMKNEASSFNRSTQDVKKRMQWKNLKMKILIXXXXXXXXGVVAGSFIVRRKRQQEA 228          
BLAST of Ggra1114.t1 vs. uniprot
Match: R7QHV8 (VAMP7b n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHV8_CHOCR)

HSP 1 Score: 177 bits (449), Expect = 3.580e-52
Identity = 94/202 (46.53%), Postives = 131/202 (64.85%), Query Frame = 0
Query:    1 MSTIFYIAAARVADHCCFAQHVVPCSNHTAAAVFEQKLQKILLSPQLKHNNRLTIVDDHQRHIHYEADPALIFLVVTAASYPQRTAFELLSAARTDFDQLFAPEMGKATPGALSKRARPVLERLVQHYHHVPNLDKISNVQHQVEQVKGMMQHNIQSALHNTDNLETLLDISDNMKNEAYSFNRSTAQVKNRMQWKDFQMKL 202
            M+ + Y+  ARV D       V   S   +    +  L ++L+S ++  ++RLTI D    +IHY ADPAL++LV+TA +YPQRTAF+LLS AR +F+Q F  E+       ++K A+P L+R++  Y  V   DKIS+V  QV+QVKG+MQ NIQ+AL N +NLETLLD SD M+NEA +FNRST   K RM+WK  +M +
Sbjct:    1 MANVVYMGIARVPDKQILVSCVATDSREQSKQQLDSILSRVLVSGRIDEHDRLTIADKDVGNIHYSADPALVYLVITATNYPQRTAFKLLSEARAEFEQEFKTELAGGKNDGVAKVAKPFLKRMMDRYEDVAREDKISSVALQVDQVKGLMQTNIQAALKNQENLETLLDSSDTMRNEASTFNRSTKDAKERMRWKSLKMNI 202          
BLAST of Ggra1114.t1 vs. uniprot
Match: A0A2V3J4P9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4P9_9FLOR)

HSP 1 Score: 171 bits (434), Expect = 5.970e-50
Identity = 93/219 (42.47%), Postives = 134/219 (61.19%), Query Frame = 0
Query:    6 YIAAARVADHCCFAQHVVPCSNHTAAAVFEQKLQKILLSPQLKHNNRLTIVDDHQRHIHYEADPALIFLVVTAASYPQRTAFELLSAARTDFDQLFAPEMGKATPGALSKRARPVLERLVQHYHHVPNLDKISNVQHQVEQVKGMMQHNIQSALHNTDNLETLLDISDNMKNEAYSFNRSTAQVKNRMQWKDFQMKLLIAFLVLLIVSIVIASVVVHRK 224
            ++A AR+ D    AQ+    S    A +F  KL K+L S ++  + RLTI D     IHY++DP  ++LVV A  Y QRTAF  L   R +FDQ F  ++  A   +LS+ A+ +L +L   Y+H  N+DK+++V  QVE+VKG MQ+NI+S L N +N+ETLLD SD MKNEA  F RS  + K++M WK+ +  + I  LVL+I + +I  +V   K
Sbjct:    9 FVAVARLVDRVPIAQYSATPSRQLPAKLFHDKLDKVLHSARIGEHTRLTITDREVGSIHYDSDPVCLYLVVCARDYQQRTAFRFLGELRNEFDQTFRTDVAGARHSSLSRSAKQMLAQLCDKYNHARNVDKVASVTLQVEEVKGAMQNNIESVLRNQENIETLLDQSDTMKNEATGFQRSAHRAKDKMWWKNTKWTIAIILLVLIIAAAIIGGIVKATK 227          
BLAST of Ggra1114.t1 vs. uniprot
Match: R7Q3S3 (VAMP7a n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3S3_CHOCR)

HSP 1 Score: 159 bits (401), Expect = 5.230e-45
Identity = 82/199 (41.21%), Postives = 126/199 (63.32%), Query Frame = 0
Query:    6 YIAAARVADHCCFAQHVVPCSNHTAAAVFEQKLQKILLSPQLKHNNRLTIVDDHQRHIHYEADPALIFLVVTAASYPQRTAFELLSAARTDFDQLFAPEMGKATPGALSKRARPVLERLVQHYHHVPNLDKISNVQHQVEQVKGMMQHNIQSALHNTDNLETLLDISDNMKNEAYSFNRSTAQVKNRMQWKDFQMKLLI 204
            Y+A AR+ D    A++    S      + ++KL+K+L S +++ + RLTI D     IHY++DP  ++LVV A  Y QR AF+ L   R +FD  F  ++  A    LS+ A+ +L  L + Y+ V N+DK++ V  QVE+VKG+MQ+NIQ+ L N +N+ETLLD +D MKNEA  F RS  + K++M WK+ +M+++I
Sbjct:    9 YVAVARLTDRVPVAEYAAIDSREVPTKLLDEKLEKVLRSGRVEEHTRLTITDREVGSIHYDSDPVCLYLVVCAREYQQRNAFKFLGEVRREFDASFGNDVQTARQSGLSRPAKELLRSLCEKYNSVQNVDKVAAVSLQVEEVKGVMQNNIQNVLRNQENIETLLDQTDTMKNEATGFQRSANRAKDKMWWKNTKMQIII 207          
BLAST of Ggra1114.t1 vs. uniprot
Match: A0A7S2ZSD8 (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZSD8_9RHOD)

HSP 1 Score: 138 bits (347), Expect = 9.600e-37
Identity = 78/203 (38.42%), Postives = 116/203 (57.14%), Query Frame = 0
Query:    6 YIAAARVADHCCFAQHVVPCSNHTAAAVFEQKLQKILLSPQLKHNNRLTIVDDHQRHIHYEADPALIFLVVTAASYPQRTAFELLSAARTDFDQLFAPEMGKATPGALSKRARPVLERLVQHYHHVPNLDKISNVQHQVEQVKGMMQHNIQSALHNTDNLETLLDISDNMKNEAYSFNRSTAQVKNRMQWKDFQMKLLIAFLV 208
            Y A  R AD    A +    S     ++ + KL ++L S ++   +RLTI D     IHY++ P  +FLV+    YPQRTAF+ L+     F++ F  E  +  P ALS  A+P+L  L   Y+ V N+DKI+ VQ QV+ VK +MQ NI + L N +NL  LLD SD M+NEA +F+R+    K +  W++ ++ ++I  LV
Sbjct:   22 YTAVVRAADRVPIATYAAANSRDIPESLMDDKLDRLLGSGRISEKSRLTITDKDVGSIHYDSGPDYLFLVICDREYPQRTAFKFLADLGQFFEERFGEEGLQCPPYALSGPAKPLLMDLCSEYNVVENVDKITGVQSQVDDVKNVMQSNISNVLQNQENLNVLLDKSDAMRNEANAFSRNAGSAKKKFWWQNVKLMIIIGVLV 224          
BLAST of Ggra1114.t1 vs. uniprot
Match: A0A5J4YUM8 (Vesicle-associated membrane protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUM8_PORPP)

HSP 1 Score: 128 bits (321), Expect = 1.660e-32
Identity = 69/190 (36.32%), Postives = 118/190 (62.11%), Query Frame = 0
Query:    6 YIAAARVADHCCFAQHVVPCSNHTAAA---VFEQKLQKILLSPQLKHNNRLTIVDDHQRHIHYEADPALIFLVVTAASYPQRTAFELLSAARTDFDQLFAPEMGKATPGALSKRARPVLERLVQHYHHVPNLDKISNVQHQVEQVKGMMQHNIQSALHNTDNLETLLDISDNMKNEAYSFNRSTAQVKNR 192
            ++A AR+ D        VP   + +A+   + E K +K+L S ++  + RLT+ D     IH+E DP  +++ +   SYPQRTAF+LL+  R +F   F P +  A  G ++K  + +++  ++ Y    N+D++  V++QV++VKG+M++NIQ AL+N +NL+TL+D +D M+NEA +F RS+   KN+
Sbjct:    8 FLAVARLQDR-------VPLLWYCSASDPELHEGKFRKLLASGRVAEHARLTVTDRDVGTIHFECDPVCVYMTMCDPSYPQRTAFQLLTEFRDEFSAEFGPAVRGARDGEMNKSGKRMVKAFMETYDQARNVDQLEGVKYQVDEVKGVMENNIQQALNNQENLDTLVDKTDVMRNEASNFQRSSQAAKNK 190          
BLAST of Ggra1114.t1 vs. uniprot
Match: A0A7S0N7B5 (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N7B5_9CHLO)

HSP 1 Score: 104 bits (259), Expect = 2.310e-23
Identity = 60/189 (31.75%), Postives = 114/189 (60.32%), Query Frame = 0
Query:   35 EQKLQKILLSPQLKHNNRLTIV-DDHQRHIHYEADPALIFLVVTAASYPQRTAFELLSAARTDFDQLFAP-EMGKAT-PGALSKRARPVLERLVQHYHHVPNLDKISNVQHQVEQVKGMMQHNIQSALHNTDNLETLLDISDNMKNEAYSFNRSTAQVKNRMQWKDFQMKLLIAFLVLLIVSIVIASVV 220
            E+ + ++L S  +K N++LT+V +D    +H  A P  +   VT ASYP+RTAF++L+A R   +    P E+ ++T PGAL+   +P L+ + Q Y  + ++DKI+ V  +V++V+ +M+ NI   L N +NL ++ D +++++  A  F R +  ++  + W++ +MK+++  LV  IV   +  ++
Sbjct:   30 EETVDRVLKSGNIKPNSQLTVVINDEIGTLHLSAGPEDVLAAVTEASYPRRTAFQMLNALREAVNNNLTPQEIAESTEPGALNGTCKPWLKEVFQKYSALESVDKITAVGMKVDEVRAVMEGNINRVLDNAENLSSVEDKAESLRQNAQQFQRKSEDLRKVLWWRNLKMKMIVFLLVASIVGYFVVPII 218          
BLAST of Ggra1114.t1 vs. uniprot
Match: A0A0L0DLR9 (Synaptobrevin n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DLR9_THETB)

HSP 1 Score: 95.1 bits (235), Expect = 2.390e-20
Identity = 63/215 (29.30%), Postives = 106/215 (49.30%), Query Frame = 0
Query:    4 IFYIAAARVADHCCFAQHVVPCSNHTAAAVFEQKLQKILLSPQLKHNNRLTIVDDHQRHIHYEADPALIFLVVTAASYPQRTAFELLSAARTDFDQLF-APEMGKATPGALSKRARPVLERLVQHYHHVPNLDKISNVQHQVEQVKGMMQHNIQSALHNTDNLETLLDISDNMKNEAYSFNRSTAQVKNRMQWKDFQMKLLIAFLVLLIVSIVIA 217
            I Y   AR  +  C  +H V   N T+          IL       N + T V     H HY     L+FL +  A  P+R  F  L+   + F+  F A    +A   +L    +P L   + +Y+H P+ DKIS VQ Q++ VKG+M  NI+  L   + +E L+D +DN+  +A+ F + +  +K  M WK+ +M +LI  ++ +++ ++++
Sbjct:    2 IIYALVARGTNVLC--EHAVRSGNFTSVTPL------ILGKLDASRNEKRTYVYSSM-HFHYVTHNGLVFLAMAEADTPRRIPFAFLADVISRFEAQFDAGVARRAIAYSLDSAFKPTLSSRIDYYNHDPSADKISAVQSQIDDVKGVMVDNIEKVLERGEKIELLVDKTDNLSAQAFQFKKKSTSLKRAMMWKNIKMWILIGMVLAIVLWLILS 207          
BLAST of Ggra1114.t1 vs. uniprot
Match: F0W8S1 (Uncharacterized protein AlNc14C36G3196 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8S1_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.810e-20
Identity = 64/232 (27.59%), Postives = 115/232 (49.57%), Query Frame = 0
Query:    6 YIAAARVADH---CCFAQHVVPCSNHTAA--AVFEQKLQKILLSP----QLKHNNRLTIVDDHQRHIHYEADPALIFLVVTAASYPQRTAFELLSAARTDFDQLFAPEMGKATPGALSKRARPVLERLVQHYHHVPNLDKISNVQHQVEQVKGMMQHNIQSALHNTDNLETLLDISDNMKNEAYSFNRSTAQVKNRMQWKDFQMKLLIAFLVLLIVSIVIASVVVHRKGQQQ 228
            +I  AR  D    CC+       +N   A  A +++   K+L +P    Q+  N R ++  D  +     ++  L+F V+T  SYP R AF+L+   + +F   FA +        L K  + +++ L   Y     +DKIS V HQV+ VK +M  NIQ  L NT+ +E +   ++++  +A  F  S  +++  M WK+ ++ + I    +L++ I++A   V + G ++
Sbjct:   45 FIGVARATDKAIICCYFHSAKASTNVDLAECAKWKEMYAKVLRAPTWKTQVTPNARHSLDCDPNKFHFSMSNDELVFAVITVKSYPIRLAFQLIQTLQQEFVPKFATKALNCREHGLDKECKSMMQTLANQYDDRTKVDKISEVLHQVDNVKSVMHTNIQVVLSNTEKMEVVEQKTNDLSEQAKVFRNSGRKLRKAMWWKNVKLTIAIGLCAILVIVIILAVSGVFKSGSKK 276          
BLAST of Ggra1114.t1 vs. uniprot
Match: A0A8J6E101 (Synaptobrevin n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6E101_9EUKA)

HSP 1 Score: 94.4 bits (233), Expect = 1.070e-19
Identity = 55/188 (29.26%), Postives = 95/188 (50.53%), Query Frame = 0
Query:    6 YIAAARVADHCCFAQHVVPCSNHTAAAVFEQKLQKILLSPQLKHNNRLTIVDDHQRHIHYEADPALIFLVVTAASYPQRTAFELLSAARTDFDQLFAPEMGKATPGALSKRARPVLERLVQHYHHVPNLDKISNVQHQVEQVKGMMQHNIQSALHNTDNLETLLDISDNMKNEAYSFNRSTAQVKNRM 193
            YIA  +  D    A H    S     A +   ++K++ + +    +RLTI       IHY+   +  F VVTA SYPQRTAF +L+  +  F       +  A   +L+ R +PVL  +   Y  + N+D++  ++ + + +KG+M  NI + +   +NL+ L D ++++  +A  F+  T +VK  M
Sbjct:    9 YIAIGKRDDQQIIASHT---SYKLDGADYPSLIEKVISASKFNERSRLTITSRDVGTIHYDTTASCAFFVVTAPSYPQRTAFRMLNELKDSFTARIGNSVADAQRNSLNSRCKPVLSSIASKYDIIENVDRLEALKTETDAIKGIMHSNIDTLIRRGENLDELDDRANSLAVDARMFHTETRRVKRTM 193          
The following BLAST results are available for this feature:
BLAST of Ggra1114.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6K27.790e-7455.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QHV83.580e-5246.53VAMP7b n=1 Tax=Chondrus crispus TaxID=2769 RepID=R... [more]
A0A2V3J4P95.970e-5042.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q3S35.230e-4541.21VAMP7a n=1 Tax=Chondrus crispus TaxID=2769 RepID=R... [more]
A0A7S2ZSD89.600e-3738.42Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YUM81.660e-3236.32Vesicle-associated membrane protein n=1 Tax=Porphy... [more]
A0A7S0N7B52.310e-2331.75Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A0L0DLR92.390e-2029.30Synaptobrevin n=1 Tax=Thecamonas trahens ATCC 5006... [more]
F0W8S13.810e-2027.59Uncharacterized protein AlNc14C36G3196 n=1 Tax=Alb... [more]
A0A8J6E1011.070e-1929.26Synaptobrevin n=1 Tax=Carpediemonas membranifera T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001388SynaptobrevinPRINTSPR00219SYNAPTOBREVNcoord: 197..216
score: 22.43
coord: 141..160
score: 36.08
coord: 161..180
score: 24.32
NoneNo IPR availableGENE3D1.20.5.110coord: 133..220
e-value: 6.5E-21
score: 75.8
NoneNo IPR availableGENE3D3.30.450.50Longin domaincoord: 2..132
e-value: 7.0E-15
score: 57.2
NoneNo IPR availablePANTHERPTHR21136:SF168VESICLE-ASSOCIATED MEMBRANE PROTEIN 9coord: 26..219
NoneNo IPR availablePANTHERPTHR21136SNARE PROTEINScoord: 26..219
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 222..229
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..221
NoneNo IPR availableCDDcd15843R-SNAREcoord: 135..193
e-value: 4.13104E-15
score: 65.6011
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 132..197
NoneNo IPR availableTMHMMTMhelixcoord: 202..221
IPR042855v-SNARE, coiled-coil homology domainPFAMPF00957Synaptobrevincoord: 135..220
e-value: 8.6E-21
score: 73.5
IPR042855v-SNARE, coiled-coil homology domainPROSITEPS50892V_SNAREcoord: 136..196
score: 12.496258
IPR010908Longin domainPFAMPF13774Longincoord: 43..104
e-value: 4.5E-10
score: 39.4
IPR010908Longin domainPROSITEPS50859LONGINcoord: 43..121
score: 10.219903
IPR010908Longin domainCDDcd14824Longincoord: 5..128
e-value: 2.00257E-17
score: 73.4441
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 35..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000945_piloncontigtig00000945_pilon:78582..79396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1114.t1Ggra1114.t1Gracilaria gracilis GNS1m malemRNAtig00000945_pilon 78582..79396 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1114.t1 ID=Ggra1114.t1|Name=Ggra1114.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=230bp
MSTIFYIAAARVADHCCFAQHVVPCSNHTAAAVFEQKLQKILLSPQLKHN
NRLTIVDDHQRHIHYEADPALIFLVVTAASYPQRTAFELLSAARTDFDQL
FAPEMGKATPGALSKRARPVLERLVQHYHHVPNLDKISNVQHQVEQVKGM
MQHNIQSALHNTDNLETLLDISDNMKNEAYSFNRSTAQVKNRMQWKDFQM
KLLIAFLVLLIVSIVIASVVVHRKGQQQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001388Synaptobrevin
IPR042855V_SNARE_CC
IPR010908Longin_dom
IPR011012Longin-like_dom_sf