Ggra10549.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10549.t1
Unique NameGgra10549.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length245
Homology
BLAST of Ggra10549.t1 vs. uniprot
Match: A0A2V3IXF3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXF3_9FLOR)

HSP 1 Score: 327 bits (837), Expect = 4.270e-108
Identity = 153/238 (64.29%), Postives = 192/238 (80.67%), Query Frame = 0
Query:    4 KTDLYEKGACRSIRGHVTYSLRDVIKKPVVSMTIMRHPLERIVSMFEFALMMIDTQPNQSGWDSWLSGVPLEYELANASSILNRGFYGENGEWMAKDNIGFSFHFYGVLHQLSGIQPIFRDVGKPKSFRMSNANEMAEKAKDNLCSTHILGLQNNMNATLDTIFDYLHPYARWNSTENETAKHAIVNRNNHKRGLRYDDYVPRSALRELQRRLGREIEVYHFAEAIVAHRKWLQDSKQ 241
            K  LY++GACRS+RGHVTY+LRD I  PVVSMT++R PLER +SMFEFALMM+ T+PN SGWDSW+SG  ++ EL NASSILNRGFY ++G WM KDN+GFSFHFYGVLHQLSGIQPIFR VG+PK+FR+ NA EMAEKAK+NLCSTHILG Q N++  LDT+F+Y+ PYARW + E    +H+  N+N+HKR  +  + +P S  RE++RRL  EIEVY FAE ++A+R+WL+  KQ
Sbjct:  177 KEMLYKRGACRSLRGHVTYALRDEIDSPVVSMTVLRDPLERFMSMFEFALMMVKTRPNTSGWDSWMSGASVQRELTNASSILNRGFYDDDGNWMEKDNVGFSFHFYGVLHQLSGIQPIFRGVGEPKAFRIINAKEMAEKAKNNLCSTHILGSQKNISRALDTLFEYMVPYARWTNREKNETRHSHANQNSHKRRSQLAENLPLSTRREIERRLKHEIEVYRFAENVIAYRQWLRSMKQ 414          
BLAST of Ggra10549.t1 vs. uniprot
Match: A0A2V3J5J3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5J3_9FLOR)

HSP 1 Score: 211 bits (537), Expect = 2.590e-63
Identity = 107/230 (46.52%), Postives = 145/230 (63.04%), Query Frame = 0
Query:    4 KTDLYEKGACRSIRGHVTYSLRDVIKKPVVSMTIMRHPLERIVSMFEFALMMIDTQPNQSGWDSWLSGVPLEYELANASSILNRGFYGENGEWMAKDNIGFSFHFYGVLHQLSGIQPIFRDVGKPKSFRMSNANEMAEKAKDNLCSTHILGLQNNMNATLDTIFDYLHPYARWNSTENETAKHAIVNRNNHKRGLRYDDYVPRSALRELQRRLGREIEVYHFAEAIVAHR 233
            +  LY +GACR +RGHVT S+    + P   +TIMR PL R VSM+EFA  M+ ++P  +GWD WL    L  EL NASS+ +RGFY E GEW AK N+GFSFHFYGVLHQLSG+ P F   G    FR+ NA+ MAE AK  LC+TH++GLQ+ +   LDT+ D   P+A+W   E      ++VN+   ++  + +D++     R +  RL  EI+VY FA  +V +R
Sbjct:  147 RATLYAQGACRVVRGHVTASMLAPFETPPYIVTIMRDPLARFVSMYEFARTMMKSRPVVTGWDPWLQADSLLDELNNASSLFHRGFYDEFGEWRAKKNVGFSFHFYGVLHQLSGMTPRFEHEGDKDRFRIVNADVMAETAKRQLCATHLVGLQHQVQDVLDTVMDVTEPFAQWTPAERSQYLKSVVNKTPGRKSRKVEDHLDAHWQRVISERLRHEIDVYEFAVRLVEYR 376          
BLAST of Ggra10549.t1 vs. uniprot
Match: A0A2V3IU09 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU09_9FLOR)

HSP 1 Score: 132 bits (332), Expect = 1.580e-34
Identity = 68/169 (40.24%), Postives = 94/169 (55.62%), Query Frame = 0
Query:   58 TQPNQSGWDSWLSGVPLEYELANASSILNRGFYGENGEWMAKDNIGFSFHFYGVLHQLSGIQPIFRDVGKPKSFRMSNANEMAEKAKDNLCSTHILGLQNNMNATLDTIFDYLHPYARWNSTENETAKHAIVNRNNHKRGLRYDDYVPRSALRELQRRLGREIEVYHFA 226
            ++P  +GWD WL    L  EL N SS+ +RGFY   G+W  K N GFSFHFYGVL QLSGI P F   G    FR++NA+ MA  AK  LC+TH++GL   +   LD++ +    +A W   E       ++N+   +     +D++     R +  RL  EI+VY FA
Sbjct:    3 SRPIATGWDPWLQADSLVDELNNPSSLFHRGFYDPYGQWREKRNEGFSFHFYGVLQQLSGITPRFEHEGGKDRFRIANAHVMAHAAKRQLCATHVVGLHYQVAHALDSVMNVTESFAHWTPAERSRYLRIVLNKTPGRSSRNVEDHLDAHWQRVISERLRHEIDVYGFA 171          
The following BLAST results are available for this feature:
BLAST of Ggra10549.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IXF34.270e-10864.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5J32.590e-6346.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IU091.580e-3440.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..243
e-value: 6.7E-20
score: 73.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000904_piloncontigtig00000904_pilon:164567..165301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10549.t1Ggra10549.t1Gracilaria gracilis GNS1m malemRNAtig00000904_pilon 164567..165301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10549.t1 ID=Ggra10549.t1|Name=Ggra10549.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=245bp
MELKTDLYEKGACRSIRGHVTYSLRDVIKKPVVSMTIMRHPLERIVSMFE
FALMMIDTQPNQSGWDSWLSGVPLEYELANASSILNRGFYGENGEWMAKD
NIGFSFHFYGVLHQLSGIQPIFRDVGKPKSFRMSNANEMAEKAKDNLCST
HILGLQNNMNATLDTIFDYLHPYARWNSTENETAKHAIVNRNNHKRGLRY
DDYVPRSALRELQRRLGREIEVYHFAEAIVAHRKWLQDSKQMTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase