Ggra10549.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10549.t1
Unique NameGgra10549.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length245
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000904_piloncontigtig00000904_pilon:164567..165301 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10549Ggra10549Gracilaria gracilis GNS1m malegenetig00000904_pilon 164567..165301 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10549.t1.start1Ggra10549.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000904_pilon 164567..164569 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10549.t1.CDS1Ggra10549.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000904_pilon 164567..165301 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10549.t1.exon1Ggra10549.t1.exon1Gracilaria gracilis GNS1m maleexontig00000904_pilon 164567..165301 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10549.t1.stop1Ggra10549.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000904_pilon 165299..165301 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10549.t1Ggra10549.t1Gracilaria gracilis GNS1m malepolypeptidetig00000904_pilon 164567..165301 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10549.t1 ID=Ggra10549.t1|Name=Ggra10549.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=245bp
MELKTDLYEKGACRSIRGHVTYSLRDVIKKPVVSMTIMRHPLERIVSMFE
FALMMIDTQPNQSGWDSWLSGVPLEYELANASSILNRGFYGENGEWMAKD
NIGFSFHFYGVLHQLSGIQPIFRDVGKPKSFRMSNANEMAEKAKDNLCST
HILGLQNNMNATLDTIFDYLHPYARWNSTENETAKHAIVNRNNHKRGLRY
DDYVPRSALRELQRRLGREIEVYHFAEAIVAHRKWLQDSKQMTS*
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spliced messenger RNA

>Ggra10549.t1 ID=Ggra10549.t1|Name=Ggra10549.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=735bp|location=Sequence derived from alignment at tig00000904_pilon:164567..165301+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGTTAAAGACAGATTTGTACGAAAAAGGAGCCTGCAGGAGTATTCG
CGGGCATGTGACCTATTCCTTGCGAGACGTGATCAAGAAGCCTGTGGTGT
CAATGACGATTATGCGTCATCCTTTGGAGAGAATAGTGAGTATGTTTGAG
TTTGCCCTGATGATGATTGACACTCAACCGAATCAGAGCGGATGGGATTC
ATGGTTGTCAGGAGTTCCGCTTGAGTACGAACTTGCCAACGCATCTTCTA
TTCTCAACAGAGGTTTCTATGGTGAGAATGGCGAGTGGATGGCGAAGGAC
AATATTGGCTTCTCCTTTCATTTCTATGGTGTGCTTCACCAACTCTCTGG
AATTCAGCCCATCTTTCGAGATGTCGGAAAACCCAAATCCTTTCGCATGT
CAAACGCAAACGAGATGGCAGAGAAGGCCAAAGATAACTTATGCTCTACG
CATATACTCGGTTTGCAGAACAACATGAACGCTACGCTGGATACCATTTT
CGATTACCTGCACCCCTATGCTCGATGGAATTCCACAGAGAACGAAACTG
CGAAGCATGCCATTGTGAACCGGAATAATCACAAACGAGGCTTGCGATAT
GATGACTATGTTCCCAGATCTGCCCTCAGGGAACTCCAGCGGCGCCTCGG
ACGCGAGATTGAAGTATATCACTTCGCCGAGGCCATTGTTGCGCACCGCA
AGTGGTTACAAGACAGCAAGCAGATGACATCCTAA
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protein sequence of Ggra10549.t1

>Ggra10549.t1 ID=Ggra10549.t1|Name=Ggra10549.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=245bp
MELKTDLYEKGACRSIRGHVTYSLRDVIKKPVVSMTIMRHPLERIVSMFE
FALMMIDTQPNQSGWDSWLSGVPLEYELANASSILNRGFYGENGEWMAKD
NIGFSFHFYGVLHQLSGIQPIFRDVGKPKSFRMSNANEMAEKAKDNLCST
HILGLQNNMNATLDTIFDYLHPYARWNSTENETAKHAIVNRNNHKRGLRY
DDYVPRSALRELQRRLGREIEVYHFAEAIVAHRKWLQDSKQMTS*
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mRNA from alignment at tig00000904_pilon:164567..165301+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10549.t1 ID=Ggra10549.t1|Name=Ggra10549.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=735bp|location=Sequence derived from alignment at tig00000904_pilon:164567..165301+ (Gracilaria gracilis GNS1m male)
ATGGAGTTAAAGACAGATTTGTACGAAAAAGGAGCCTGCAGGAGTATTCG
CGGGCATGTGACCTATTCCTTGCGAGACGTGATCAAGAAGCCTGTGGTGT
CAATGACGATTATGCGTCATCCTTTGGAGAGAATAGTGAGTATGTTTGAG
TTTGCCCTGATGATGATTGACACTCAACCGAATCAGAGCGGATGGGATTC
ATGGTTGTCAGGAGTTCCGCTTGAGTACGAACTTGCCAACGCATCTTCTA
TTCTCAACAGAGGTTTCTATGGTGAGAATGGCGAGTGGATGGCGAAGGAC
AATATTGGCTTCTCCTTTCATTTCTATGGTGTGCTTCACCAACTCTCTGG
AATTCAGCCCATCTTTCGAGATGTCGGAAAACCCAAATCCTTTCGCATGT
CAAACGCAAACGAGATGGCAGAGAAGGCCAAAGATAACTTATGCTCTACG
CATATACTCGGTTTGCAGAACAACATGAACGCTACGCTGGATACCATTTT
CGATTACCTGCACCCCTATGCTCGATGGAATTCCACAGAGAACGAAACTG
CGAAGCATGCCATTGTGAACCGGAATAATCACAAACGAGGCTTGCGATAT
GATGACTATGTTCCCAGATCTGCCCTCAGGGAACTCCAGCGGCGCCTCGG
ACGCGAGATTGAAGTATATCACTTCGCCGAGGCCATTGTTGCGCACCGCA
AGTGGTTACAAGACAGCAAGCAGATGACATCCTAA
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Coding sequence (CDS) from alignment at tig00000904_pilon:164567..165301+

>Ggra10549.t1 ID=Ggra10549.t1|Name=Ggra10549.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=735bp|location=Sequence derived from alignment at tig00000904_pilon:164567..165301+ (Gracilaria gracilis GNS1m male)
ATGGAGTTAAAGACAGATTTGTACGAAAAAGGAGCCTGCAGGAGTATTCG
CGGGCATGTGACCTATTCCTTGCGAGACGTGATCAAGAAGCCTGTGGTGT
CAATGACGATTATGCGTCATCCTTTGGAGAGAATAGTGAGTATGTTTGAG
TTTGCCCTGATGATGATTGACACTCAACCGAATCAGAGCGGATGGGATTC
ATGGTTGTCAGGAGTTCCGCTTGAGTACGAACTTGCCAACGCATCTTCTA
TTCTCAACAGAGGTTTCTATGGTGAGAATGGCGAGTGGATGGCGAAGGAC
AATATTGGCTTCTCCTTTCATTTCTATGGTGTGCTTCACCAACTCTCTGG
AATTCAGCCCATCTTTCGAGATGTCGGAAAACCCAAATCCTTTCGCATGT
CAAACGCAAACGAGATGGCAGAGAAGGCCAAAGATAACTTATGCTCTACG
CATATACTCGGTTTGCAGAACAACATGAACGCTACGCTGGATACCATTTT
CGATTACCTGCACCCCTATGCTCGATGGAATTCCACAGAGAACGAAACTG
CGAAGCATGCCATTGTGAACCGGAATAATCACAAACGAGGCTTGCGATAT
GATGACTATGTTCCCAGATCTGCCCTCAGGGAACTCCAGCGGCGCCTCGG
ACGCGAGATTGAAGTATATCACTTCGCCGAGGCCATTGTTGCGCACCGCA
AGTGGTTACAAGACAGCAAGCAGATGACATCCTAA
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