Ggra10401.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10401.t1
Unique NameGgra10401.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length508
Homology
BLAST of Ggra10401.t1 vs. uniprot
Match: A0A2V3IUL8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUL8_9FLOR)

HSP 1 Score: 350 bits (897), Expect = 4.910e-112
Identity = 204/498 (40.96%), Postives = 299/498 (60.04%), Query Frame = 0
Query:    1 MEDILLNINPSILNVLKYIIIALVINPLLEVLVDSIMCAKATFDLLRGRCISFSDSKLGIYSLHLVFWGRKRNRCFLALLALFIICPEMLLEFSFSSKTIAVSQQQQVWKQPNHSQRYIPSPENKNWINEYFKATGFLQEVARVCTEGPENMMSRKTNNLEQNEHYQGGLMYFMEGTYAIRKPYINHTDGSVCCSSTREKAYGRFVVPRVSKVRNGPDVEGLDLDSISNASSNITSIFHRHPVRAINSYELTGMVVGV---GERGACFEFLCIVINDNRTFVLFTSENEYTQVRVPAVPTVRAIVMEASGDAVKRLVDNGRQIRLLTALYFENKLVSL---DASPSVRLVSKLTLRQIAFWIMVAANEEGVGGLDDGIMNRTVIGGEKRTVATATDMFPISVSILGSVWVLLLTSCMILRVMIAAKESRSRSIWSRFWRQQRLQTSKQNMTAQVVEDLRSLGVLGVSEACDVCIRLVSGKDSKQALRLLPSNVCGASL 492
            M +I L I+PSILNV+KY ++AL++ PL E+L DS++ AK+T+D+L G  I FS S+LGI+SLH  +WGR RNR  L  L   +I  E+L EFSFSS T+ + + +QVWKQP+H+QRYIP+   +  I  Y + T F   VA  CT GP  M+  ++N+ + NE YQGGL + + G Y IR PY   +D  V CS+T++ A   F+VPRV + R    VEG+ L+  ++    I SI   +P   I+ +  T   VG    G+ G C    C++ + +R+FVL     E              +V++ASG+A++ L + GRQ+RL+  + +EN    +   + SPS+R+  K  +  +A W++VAANEEGVGGL    +NRTV+GG  R +ATAT   P SVS L  +  LL+ SC+++RVMIA    + +    RFWRQ RLQT+KQ M A+++EDL+  G        ++  RL +    +  LRL+P ++   S+
Sbjct:    1 MTEIQLGIDPSILNVIKYGVVALILTPLFEILADSLVSAKSTYDVLSGHTIEFSHSQLGIFSLHGTYWGRSRNRFMLIALGFAVIATELLFEFSFSSTTVDLEEVRQVWKQPSHAQRYIPAAGRER-IELYREPTEFPGAVALRCTRGPRTMLRYRSNHTDGNERYQGGLEFRLNGNYTIRMPYRARSDDEVLCSATQKTAKATFIVPRVVRTRTASQVEGVSLEVPTSGYKYIKSIVQDNPPPVIDLFLYTDTEVGEVRSGDNGTCAGSWCLIRDRDRSFVLVFWTFESI-----------VVVIKASGNALEGLTERGRQVRLILTIIYENLFTGIGFNELSPSLRVAEKNDMETLARWMIVAANEEGVGGLKAATVNRTVVGG-SRQMATATGYLPASVSGLALIGSLLMVSCLLVRVMIARMGDKQQPFAVRFWRQWRLQTTKQYMRAKMLEDLQHYGFCESVTLQNIGFRLDTHGGPEATLRLIPIDLAHNSV 485          
BLAST of Ggra10401.t1 vs. uniprot
Match: A0A2V3IIK4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIK4_9FLOR)

HSP 1 Score: 203 bits (516), Expect = 9.770e-56
Identity = 164/501 (32.73%), Postives = 265/501 (52.89%), Query Frame = 0
Query:    1 MEDILLNINPSILNVLKYIIIALVINPLLEVLVDSIMCAKATFDLLRGRCISFSDSKLGIYSLHLVFWGRKRNRCFLALLALFIICPEMLLEFSFSSKTIAVSQQQQVWKQPNHSQRY------IPSPENKNWINEYFKATGFLQEVARVCTEGPENMMSRKTNNLEQNEHYQGGLMYFMEGTYAIRKPYINHTDGSVCCSSTREKAYGRFVVPRVSKVRNGPDVEG-LDLDSISNASS---NITS-IFHRHPVRAINSYELTGM--VVGVGERGACFEFLCIVINDNRTFVLFTSENEYTQVRVPAVPTVRAIVMEASGDAVKRLVDNGRQIRLLTALYFENKLVSLDAS---PSVRLVSKLTLRQIAFWIMVAANEEGVGGLDDGIMNRTVIGGEKRTVATATDMFPISVSILGSVWVLLLTSCMILRVMIAAK-ESRSRSIWSRFWRQQRLQTSKQNMTAQVVEDLRSLGVLGVSEACDVCIRLVSGKDSKQALRLLP 484
            M+DI+LN++PS  NVLK+II+ ++  PLLE L+   +  KAT+D++RG  + F++S LG+ SLH V+WGR+RN  +L L+A  +   E++ EFSFS++ + +++ ++VW  P+H++ Y      +  PE +    E F+   F    A  C +G E+ M R   + E +  +  G  Y ME TY IRKPY+   + SV CS +       F VP V  V +    EG L L + SN+ +   ++TS  F  +    +N  ++      V +  R     FLC +   N   +  TSE      RVP   T+ ++V+ A+G  V+ +    R++R L A    N L++       PS +LV+K     +A  ++V ANEEGVGG  + I  R+ + G+ +T AT   +  + ++IL S  V LL   + L  +IA+  + + R IW       R  TS Q +  ++ EDL   GV     + ++ +++VSG+     L++LP
Sbjct:    1 MQDIVLNLDPSTWNVLKFIILTIITTPLLEFLLQRFINTKATYDVMRGEHVQFAESNLGVLSLHSVYWGRRRNSIYLLLVASLVFASELIFEFSFSAQALDIAEPREVWLPPSHAEHYTFSRRSLDGPERR----EPFQ---FPVLAAETCIKG-ESEMRRTGRSNEADGEFISGFEYHMEDTYVIRKPYLALDNSSVLCSVSTTIGRVSFFVPHVYLVNSSTGAEGVLALKNTSNSENVRQSLTSGTFDSYGF--VNDVQVVASDNAVCIRSRSRSKTFLCAMYVMNAFILARTSE--IWSDRVPD-KTLLSVVLNATGQPVEGMRSRTRKLRYL-ATVSGNALLNTFVEGRRPSHQLVTKDKTETLALLVLVVANEEGVGGSRNKIGKRSFVIGQAQT-ATMKRLAFVPIAILVSFLVFLLVVEVTLSKLIASSTKHQGRKIWGCTRAGSRADTSIQWLRERICEDLLHDGVFRNISSKELSLKIVSGE-----LQMLP 481          
BLAST of Ggra10401.t1 vs. uniprot
Match: A0A2V3ITH0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITH0_9FLOR)

HSP 1 Score: 198 bits (504), Expect = 5.520e-54
Identity = 160/505 (31.68%), Postives = 255/505 (50.50%), Query Frame = 0
Query:    1 MEDILLNINPSILNVLKYIIIALVINPLLEVLVDSIMCAKATFDLLRGRCISFSDSKLGIYSLHLVFWGRKRNRCFLALLALFIICPEMLLEFSFSSKTIAVSQQQQVWKQPNHSQRYIPSPENKNWINEYFKATGFLQEVARV--CTEGPENMMSRKTNNLEQNEHYQGGLMYFMEGTYAIRKPYINHTDGSVC-CSSTREKAYGRFVVPRVSKV------RNGPDVEGLDLDSISNASSNITSIFHRHPVRAINSYELTGMVVGVGERGACF----------EFLCIVINDNRTFVLFTSENEYTQVRVPAVPTVRAIVMEASGDAVKRLVDN-GRQIRLLTALYFENKLVSLDASPSVRLVSKLTLRQIAFWIMVAANEEGVGGLDDGIMNRTVIGGEKRTVATATDMFPISVSILGSVWVLLLTSCMILRVMIAAKESRSRSIWSRFWRQQRLQTSKQNMTAQVVEDLRSLGVLGV-SEACDVCIRLVSGKDSKQALRLLP 484
            ME++ LN++PS+ N++KY+ ++L+I P  E L+  +   KA +D+LRGR ++ SD++LGI+SLH  FWGR RNR  L ++  F+I  E+L EFSFSSK +A S+ +QVW QP+H QRY+ S E  +++ E         E A +  C EG  NM  ++     ++E  Q  + Y + G Y +R+PY++ TD +   CS+   +    F VP  +KV        G D  G   D   N S     +  +   +A  + + T + +  G+   C            +L   +     F L          RV    ++  IVME SG A+  LVD  GRQIR L +  F N +    AS     + K TL QI    ++ ANEEGV G+     +R V+ G +   A+   +  I  +++G + +L ++  ++L + IA  + ++         Q  ++ S Q +  Q+  DL  LG+    +E  ++  +LV   D +Q L+LLP
Sbjct:    1 MEELSLNVSPSVWNIIKYVTLSLIITPTFEFLLHRLSQQKARWDILRGRTVALSDTRLGIFSLHSTFWGRSRNRYLLLVIGTFVIAIELLFEFSFSSKLVAKSKTEQVWSQPDHQQRYLISSEEVHFMRE---PALLPVEAANIEGCVEGEFNMRRKEKT---KDEFQQTIMEYSINGMYTVRRPYLSATDNATLYCSADHIEKKASFFVPFATKVVYDDVEEEGFDYFGAFEDKFYNRSI-YADVDMKLRFKANLTIDDTKLYMFNGKNSICIGSKSLAVFGTAYLLCGLRAQSAFSLAVGSLHEDDERV----SISTIVMEMSGPALGPLVDQAGRQIRFLLSNLFLNLVWHRPASEGASKLRKTTLEQIVQIALIVANEEGVAGIRRVKASREVLDGVQER-ASVKRLAIIPGALIGGMLLLFISMNVLLAICIAKAQRKTG--------QHSVRISTQFLRKQLRNDL--LGMRAAHNEWQEIGYKLVQDAD-EQRLQLLP 482          
BLAST of Ggra10401.t1 vs. uniprot
Match: A0A2V3IIJ0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIJ0_9FLOR)

HSP 1 Score: 116 bits (291), Expect = 2.440e-24
Identity = 109/401 (27.18%), Postives = 182/401 (45.39%), Query Frame = 0
Query:    2 EDILLNINPSILNVLKYIIIALVINPLLEVLVDSIMCAKATFDLLRGRCISFSDSKLGIYSLHLVFWGRKRNRCFLALLALFIICPEMLLEFSFSSKTIAVSQQQQVWKQPNHSQRYIPSPENKNWINEYFKATGFLQEVARVCTEGPENMM--SRKTNNLEQNEHYQGGLMYFMEGTYAIRKPYINHTDGSVCCSSTREKAYGRFVVPRVSKVRNGPDVEGL--DLDSISNASSNITSIFHRHPVRAINSYELTGMVVGV--GERGACFEFLCIV-----IND-NRTFVLFTSENEYTQVRVPA-VPTVRAIVMEASGDAVKRLV-DNGRQIRLLTALYFENKLVSLDASPSVR-LVSKLTLRQIAFWIMVAANEEGVGGLDDGIMNRTVI--GGEKRTV 385
            + +LLN++PS+ NVLK+ +  LVI P  E++  S+M + AT  +  G  +   DS+LGI++LH  + G++R R +L L    ++  E+ LE SFS+  + V+  ++VW  PNH +RY+   EN + IN+  + T  L+ ++R C  GP  M   S +   +   E  +    Y +   + +R  Y+   D  V C +  E  +     P +        VEG   D D      S      H        ++   G       G R  C E    V     I+D     V     N    + + A +   R + +   G  V+ L   + RQ+RLL A   E +++    S +++ +V K +L ++A   ++ + E  V G+ +    R V   GG+ R V
Sbjct:    3 KQLLLNLSPSVWNVLKWALFTLVITPAFEIMTASLMASSATARVQAGAQLELFDSQLGIFALHSRYAGKRRTRLWLVLGTAVLMALELWLEMSFSAAEVVVTVSEEVWVGPNHDERYMRR-ENFS-IND--EPTRLLETMSRQCIAGPRAMKRDSVQRATVTVLEEAEVIAQYSLTANWTVRAAYVREEDSLVACDAVAETKWASVEAPNIVSQYG---VEGFHSDCDPALGLDSEWFQTLHNESFTQRGAFVFEGERARAYSGTRATCVELDAGVDRAEDIDDVPLRLVCALQLNSTVAITLTAGLNIARCVALLLHGPGVETLAGSHARQLRLL-AFVAETRILWPGWSNTLKGMVQKRSLERVAMAALMVSGERAVSGVAERRERRRVTQSGGQVRQV 395          
The following BLAST results are available for this feature:
BLAST of Ggra10401.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IUL84.910e-11240.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IIK49.770e-5632.73Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITH05.520e-5431.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IIJ02.440e-2427.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..390
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 418..507
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 391..417
NoneNo IPR availableTMHMMTMhelixcoord: 396..418
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 76..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000108_piloncontigtig00000108_pilon:227123..228646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10401.t1Ggra10401.t1Gracilaria gracilis GNS1m malemRNAtig00000108_pilon 227123..228646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10401.t1 ID=Ggra10401.t1|Name=Ggra10401.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=508bp
MEDILLNINPSILNVLKYIIIALVINPLLEVLVDSIMCAKATFDLLRGRC
ISFSDSKLGIYSLHLVFWGRKRNRCFLALLALFIICPEMLLEFSFSSKTI
AVSQQQQVWKQPNHSQRYIPSPENKNWINEYFKATGFLQEVARVCTEGPE
NMMSRKTNNLEQNEHYQGGLMYFMEGTYAIRKPYINHTDGSVCCSSTREK
AYGRFVVPRVSKVRNGPDVEGLDLDSISNASSNITSIFHRHPVRAINSYE
LTGMVVGVGERGACFEFLCIVINDNRTFVLFTSENEYTQVRVPAVPTVRA
IVMEASGDAVKRLVDNGRQIRLLTALYFENKLVSLDASPSVRLVSKLTLR
QIAFWIMVAANEEGVGGLDDGIMNRTVIGGEKRTVATATDMFPISVSILG
SVWVLLLTSCMILRVMIAAKESRSRSIWSRFWRQQRLQTSKQNMTAQVVE
DLRSLGVLGVSEACDVCIRLVSGKDSKQALRLLPSNVCGASLRRALMQSD
SLKECDV*
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