Ggra10389.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10389.t1
Unique NameGgra10389.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length110
Homology
BLAST of Ggra10389.t1 vs. uniprot
Match: A0A2V3J612 (60S acidic ribosomal protein P1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J612_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 2.390e-34
Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 0
Query:    5 DTNEMACVYAALILHDDGIPVTEDKIKTLTEAAGITVEPYWPAMFARLVENVNMDDLISNIGAAP 69
            +T+EMACVYAALILHDDGIP+TEDKIKTLT+AAGI VEPYWP MFARL+E VNMDDLISNIGAAP
Sbjct:    3 ETSEMACVYAALILHDDGIPITEDKIKTLTDAAGIKVEPYWPPMFARLLETVNMDDLISNIGAAP 67          
BLAST of Ggra10389.t1 vs. uniprot
Match: R7QCC6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCC6_CHOCR)

HSP 1 Score: 122 bits (305), Expect = 2.040e-33
Identity = 88/109 (80.73%), Postives = 100/109 (91.74%), Query Frame = 0
Query:    1 MAQTDTNEMACVYAALILHDDGIPVTEDKIKTLTEAAGITVEPYWPAMFARLVENVNMDDLISNIGAAPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEFDLFD 109
            ++  +TNEMACVYAAL+LHDDGI +TEDKIKTLTEAAGITVEPYWP+MFA+L+E V +DDLI+NIGAAP +  XXXXXXXXXXXXXXXXXXXXXXXXXXXX M+FDLFD
Sbjct:   34 LSMAETNEMACVYAALVLHDDGIAITEDKIKTLTEAAGITVEPYWPSMFAKLLETVKIDDLINNIGAAPASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMDFDLFD 142          
BLAST of Ggra10389.t1 vs. uniprot
Match: M2XBC1 (60S ribosomal protein LP1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XBC1_GALSU)

HSP 1 Score: 97.4 bits (241), Expect = 5.280e-24
Identity = 40/69 (57.97%), Postives = 57/69 (82.61%), Query Frame = 0
Query:    1 MAQTDTNEMACVYAALILHDDGIPVTEDKIKTLTEAAGITVEPYWPAMFARLVENVNMDDLISNIGAAP 69
            MA T  +EMACVYA LILHD+G+P+T++ IKTL  AA + VEP+WP +FAR+++ V++D L++NIG+AP
Sbjct:    1 MADTHASEMACVYAGLILHDEGLPITDENIKTLLTAAQVHVEPFWPGLFARMIQKVDIDGLVTNIGSAP 69          
BLAST of Ggra10389.t1 vs. uniprot
Match: A0A7M5WQM4 (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WQM4_9CNID)

HSP 1 Score: 97.1 bits (240), Expect = 5.990e-24
Identity = 41/71 (57.75%), Postives = 57/71 (80.28%), Query Frame = 0
Query:    1 MAQTDTNEMACVYAALILHDDGIPVTEDKIKTLTEAAGITVEPYWPAMFARLVENVNMDDLISNIGAAPVA 71
            MA+T T+E+ACVY+ALILHDD + +T DKI+ +  AA +TVEP+WP +FA+ +E  N+ DLISN+G+AP A
Sbjct:    1 MAETSTSELACVYSALILHDDDVDITADKIQKICTAANVTVEPFWPGLFAKALEGRNIGDLISNVGSAPAA 71          
BLAST of Ggra10389.t1 vs. uniprot
Match: A0A6A2WHQ2 (60S acidic ribosomal protein P1 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WHQ2_HIBSY)

HSP 1 Score: 94.0 bits (232), Expect = 9.260e-23
Identity = 40/62 (64.52%), Postives = 54/62 (87.10%), Query Frame = 0
Query:    6 TNEMACVYAALILHDDGIPVTEDKIKTLTEAAGITVEPYWPAMFARLVENVNMDDLISNIGA 67
            T E+AC YAALILHDDGI VT +KI TL +AA ++VE YWP++FA+L+ENVN+DD+I+N+G+
Sbjct:    3 TGEIACTYAALILHDDGISVTAEKIATLVKAANVSVESYWPSLFAKLLENVNVDDVITNVGS 64          
BLAST of Ggra10389.t1 vs. uniprot
Match: A0A5N5F4I5 (60S acidic ribosomal protein P1-like n=2 Tax=Maleae TaxID=721813 RepID=A0A5N5F4I5_9ROSA)

HSP 1 Score: 92.8 bits (229), Expect = 2.870e-22
Identity = 41/61 (67.21%), Postives = 50/61 (81.97%), Query Frame = 0
Query:    7 NEMACVYAALILHDDGIPVTEDKIKTLTEAAGITVEPYWPAMFARLVENVNMDDLISNIGA 67
            +E+AC YAALILHDDGIP+T +KI TL +AA ITVE YWP +FA+L E  N+DDLI N+GA
Sbjct:    4 SELACSYAALILHDDGIPITSEKIATLVKAANITVESYWPGLFAKLAEKKNIDDLILNVGA 64          
BLAST of Ggra10389.t1 vs. uniprot
Match: 60S acidic ribosomal protein P1-like n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064DEAE6 (60S acidic ribosomal protein P1-like n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064DEAE6)

HSP 1 Score: 92.4 bits (228), Expect = 4.540e-22
Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    8 EMACVYAALILHDDGIPVTEDKIKTLTEAAGITVEPYWPAMFARLVENVNMDDLISNIGA 67
            E+AC YAALILHDDGIPVT DKI TL +AA +TVE YWP++FA+L E  N+DDLI N+G+
Sbjct:    5 EIACTYAALILHDDGIPVTADKIATLLKAANVTVESYWPSLFAKLCEKRNIDDLIMNVGS 64          
BLAST of Ggra10389.t1 vs. uniprot
Match: A0A498KPJ5 (Uncharacterized protein n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498KPJ5_MALDO)

HSP 1 Score: 92.8 bits (229), Expect = 6.140e-22
Identity = 41/61 (67.21%), Postives = 50/61 (81.97%), Query Frame = 0
Query:    7 NEMACVYAALILHDDGIPVTEDKIKTLTEAAGITVEPYWPAMFARLVENVNMDDLISNIGA 67
            +E+AC YAALILHDDGIP+T +KI TL +AA ITVE YWP +FA+L E  N+DDLI N+GA
Sbjct:    4 SELACSYAALILHDDGIPITSEKIATLVKAANITVESYWPGLFAKLAEKKNIDDLILNVGA 64          
BLAST of Ggra10389.t1 vs. uniprot
Match: I0Z1Z3 (Ribosomal protein 60S n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z1Z3_COCSC)

HSP 1 Score: 91.3 bits (225), Expect = 1.220e-21
Identity = 39/62 (62.90%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    6 TNEMACVYAALILHDDGIPVTEDKIKTLTEAAGITVEPYWPAMFARLVENVNMDDLISNIGA 67
            T+E+ACVYA+LILHDDG+ +T D I TL +AAG+TVEPYWP +FA+L E  ++ DLI+N+GA
Sbjct:    3 TSELACVYASLILHDDGLDITGDNITTLIKAAGVTVEPYWPGLFAKLFEKRSIGDLITNVGA 64          
BLAST of Ggra10389.t1 vs. uniprot
Match: A0A6I9SZL2 (60S acidic ribosomal protein P1 n=6 Tax=lamiids TaxID=91888 RepID=A0A6I9SZL2_SESIN)

HSP 1 Score: 91.3 bits (225), Expect = 1.480e-21
Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    8 EMACVYAALILHDDGIPVTEDKIKTLTEAAGITVEPYWPAMFARLVENVNMDDLISNIGA 67
            E+AC YAALILHDDGIP+T +KI TL +AA +TVE YWP++FA+L E  N+DDLI N+G+
Sbjct:    5 ELACTYAALILHDDGIPITAEKIATLVKAANVTVESYWPSLFAKLCEKRNIDDLIMNVGS 64          
The following BLAST results are available for this feature:
BLAST of Ggra10389.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6122.390e-3487.6960S acidic ribosomal protein P1 n=1 Tax=Gracilario... [more]
R7QCC62.040e-3380.73Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2XBC15.280e-2457.9760S ribosomal protein LP1 n=1 Tax=Galdieria sulphu... [more]
A0A7M5WQM45.990e-2457.75Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A0A6A2WHQ29.260e-2364.5260S acidic ribosomal protein P1 n=1 Tax=Hibiscus s... [more]
A0A5N5F4I52.870e-2267.2160S acidic ribosomal protein P1-like n=2 Tax=Malea... [more]
60S acidic ribosomal protein P1-like n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064DEAE64.540e-2268.3360S acidic ribosomal protein P1-like n=1 Tax=Eryth... [more]
A0A498KPJ56.140e-2267.21Uncharacterized protein n=1 Tax=Malus domestica Ta... [more]
I0Z1Z31.220e-2162.90Ribosomal protein 60S n=1 Tax=Coccomyxa subellipso... [more]
A0A6I9SZL21.480e-2165.0060S acidic ribosomal protein P1 n=6 Tax=lamiids Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..104
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 25..108
e-value: 2.7E-22
score: 79.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..109
NoneNo IPR availablePANTHERPTHR4569660S ACIDIC RIBOSOMAL PROTEIN P1coord: 6..109
NoneNo IPR availableCDDcd05831Ribosomal_P1coord: 8..65
e-value: 1.12101E-28
score: 97.7775
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 3..66
e-value: 7.2E-31
score: 107.8
IPR027534Ribosomal protein L12/P1/P2 familyHAMAPMF_01478Ribosomal_L12_archcoord: 9..109
score: 14.388288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000108_piloncontigtig00000108_pilon:190652..191071 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10389.t1Ggra10389.t1Gracilaria gracilis GNS1m malemRNAtig00000108_pilon 190652..191071 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10389.t1 ID=Ggra10389.t1|Name=Ggra10389.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=110bp
MAQTDTNEMACVYAALILHDDGIPVTEDKIKTLTEAAGITVEPYWPAMFA
RLVENVNMDDLISNIGAAPVAAPAAGGAAADGAADEQKEEEKEESEEEEE
EEMEFDLFD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038716P1/P2_N_sf
IPR027534Ribosomal_L12/P1/P2