Ggra10205.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10205.t1
Unique NameGgra10205.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length309
Homology
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BLAST of Ggra10205.t1 vs. uniprot
Match: A0A2V3ILD0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILD0_9FLOR)

HSP 1 Score: 365 bits (937), Expect = 8.500e-124
Identity = 199/302 (65.89%), Postives = 222/302 (73.51%), Query Frame = 0 
Query:    6 HSGASSSPPSXXXXXXXXRRSHSAAAPLSGRWRVVGGWSSLRRAHAKSKSASAAPSRVSGRRDSTLRRDTA--VAEQVTSRHRISLFLRRARARDTDGAPPRSHSDDGDAERARGLFRRAQSHLVKSVGERAAGEGATYVQYAAELDDASVERLRLGGRTKTNLRLLNEHDGEQ-HEHELIGEICLADFADGDDDFDMLDGQSIDVAFEPTSAAMPSRASLKFDSAQLRWIGDEKEFAAFFAQVGLDELWEKEHQQWEEFQVPDHVVDEWRRSAEEHNVRCGIWNDVRDTDIRLLLRDFEQR 304
            HS  SSSP          RR  S A PLSGRWR+VGGWSSLRR H++  S +A+P                  VAEQ+TSRHRISLFLRR R RD +G    +  D    +++ GLFRRAQSHLVKSVG+R AGEGA YVQYAAELDDASVERLRLGGRTKTNLRLL EH  E  HEH+LIGEICLADFADGDDD D+LDGQSIDVAFEPTS  MPSR SLKFDS QLRWIGDEKEFAAFFAQVGLDELWEKEHQQW+EF V   + +EW  + EEHN RC +W D+   DIR +L +FE+R
Sbjct:    5 HSKPSSSP---------KRRPQSQAPPLSGRWRIVGGWSSLRRPHSRRNSPNASPXXXXXXXXXXXXXXXXXXVAEQLTSRHRISLFLRRGRTRDAEGTKSETEQDP---DKSSGLFRRAQSHLVKSVGDRPAGEGARYVQYAAELDDASVERLRLGGRTKTNLRLLPEHHHENDHEHQLIGEICLADFADGDDDLDILDGQSIDVAFEPTSVGMPSRTSLKFDSGQLRWIGDEKEFAAFFAQVGLDELWEKEHQQWDEFLVDQQLFEEWTHAGEEHNKRCAVWRDLSLPDIRDVLPEFERR 294
The following BLAST results are available for this feature:
BLAST of Ggra10205.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILD08.500e-12465.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:86549..87475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10205.t1Ggra10205.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 86549..87475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10205.t1 ID=Ggra10205.t1|Name=Ggra10205.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=309bp
MSKVHHSGASSSPPSPSPSPSPSRRSHSAAAPLSGRWRVVGGWSSLRRAH
AKSKSASAAPSRVSGRRDSTLRRDTAVAEQVTSRHRISLFLRRARARDTD
GAPPRSHSDDGDAERARGLFRRAQSHLVKSVGERAAGEGATYVQYAAELD
DASVERLRLGGRTKTNLRLLNEHDGEQHEHELIGEICLADFADGDDDFDM
LDGQSIDVAFEPTSAAMPSRASLKFDSAQLRWIGDEKEFAAFFAQVGLDE
LWEKEHQQWEEFQVPDHVVDEWRRSAEEHNVRCGIWNDVRDTDIRLLLRD
FEQRRRAV*
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