Ggra10192.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10192.t1
Unique NameGgra10192.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length329
Homology
BLAST of Ggra10192.t1 vs. uniprot
Match: A0A2V3IP67 (Transcription factor MYB44 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP67_9FLOR)

HSP 1 Score: 205 bits (522), Expect = 2.250e-60
Identity = 142/316 (44.94%), Postives = 185/316 (58.54%), Query Frame = 0
Query:   26 HKMSVQNLVC-PPLPTMPPP----PVPSHHVSFSSELHFSSRTSRY----SQQLP--QITPLPSSSPTAPPPPPMLSPTLKALPISHPLPPLLPHGLSSHTSLYRNQDYAKQHAPTQPQVQQQSRAQLRHFSSHSCVADRPISVAMEPRNSCSEDSTGARAT--PALGVPEPKAKRPWTEQEDRLLRSLVEQLGQGLWASIAAQIPGRSGKQVRERWLNHLSPNVTKRPWSNEEDDIIIENHRRFGNCWSRIAKLLEGRSDNSVKNRFYTTLKRRIHTSRTMNRTFSGKRNRSQQTNSDDSSELPHQKLKQNRVWE 328
             KMSVQN +C P LP +PPP    P     ++ S     SS   R+    S  LP  + TP   +  TAPP      P+L+  P     P      LS   S   +Q   +  A TQP  + +   ++    +HS   +R   +  E R S ++DS+ +++   P   V  P+AKRPWT QEDRLLRSLVE+ G+  WA+IA +IP R+GKQVRER+LN+LSP +++RP+S +ED+IIIE HR  GN WSRIAK L GRSDNSVKNRFY TLK+RI  SR   +   GKR+R +Q   DD +E P Q  KQ RVWE
Sbjct:   38 EKMSVQNFICNPSLPPLPPPFPHSPKQPSTITPSQSRPNSSIPIRFYKIFSNMLPSQRCTPASEAESTAPP-----RPSLRNNPQKTTSP------LSCARSQTSSQPNLRSPAHTQPVTESE---RIETQPNHSLQPERSTCIPSEHRKSYTDDSSISKSALVPDPYVHTPRAKRPWTSQEDRLLRSLVEKHGERDWAAIAEEIPHRTGKQVRERYLNYLSPKISQRPFSKQEDEIIIEKHRVLGNRWSRIAKFLNGRSDNSVKNRFYVTLKKRIEASRDSRQL--GKRSRPEQKKQDDQTEEPIQPTKQRRVWE 337          
BLAST of Ggra10192.t1 vs. uniprot
Match: A0A5J4Z7G3 (Myb-related protein A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7G3_PORPP)

HSP 1 Score: 142 bits (359), Expect = 1.320e-37
Identity = 73/139 (52.52%), Postives = 93/139 (66.91%), Query Frame = 0
Query:  153 DRPISVAMEPRNSCSEDSTGARATPALG-----VPEPKAKRPWTEQEDRLLRSLVEQLGQGLWASIAAQIPGRSGKQVRERWLNHLSPNVTKRPWSNEEDDIIIENHRRFGNCWSRIAKLLEGRSDNSVKNRFYTTLKR 286
            D P   A+E  +  S  +T + +  ALG         K K PW  +ED LLRSLV ++G   W+ +AAQIPGR+GKQ RERWLN LSP++ K PW+ EED II++ H R GN WS IAKLL GR+DNSVKNRF +T+K+
Sbjct:   65 DGPAQSAVETVSG-SSSATASESVVALGDARTPTQGKKIKGPWRPEEDELLRSLVAKMGPRRWSLVAAQIPGRTGKQSRERWLNQLSPSLAKAPWTEEEDMIIMDAHSRLGNRWSEIAKLLNGRTDNSVKNRFNSTIKK 202          
BLAST of Ggra10192.t1 vs. uniprot
Match: A0A7S1TIW2 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIW2_9RHOD)

HSP 1 Score: 141 bits (355), Expect = 2.070e-36
Identity = 81/175 (46.29%), Postives = 101/175 (57.71%), Query Frame = 0
Query:  128 APTQPQVQQQSRA-QLRHFSSHSCVADRPISVAMEPRNSCSEDSTGARATPALG-------------VPEPKAKRPWTEQEDRLLRSLVEQLGQGLWASIAAQIPGRSGKQVRERWLNHLSPNVTKRPWSNEEDDIIIENHRRFGNCWSRIAKLLEGRSDNSVKNRFYTTLKRRI 288
            +PT P ++  S + Q R FS +  V       ++ P         G RA+PAL                E K K PW  QED LL+ LVE+ G   W  IA  IPGRSGKQ RERWLN LSP + KRPW+  ED II++ H R GN WS IAK LEGR+DN+VKNRF TT++R++
Sbjct:   85 SPTLPPIELGSHSRQERGFSRYPSVLP-----SLSPVTEIKHQQ-GNRASPALEQTLQETDDAPVRTTQEVKVKGPWRPQEDELLQRLVEKYGAKRWTLIANSIPGRSGKQARERWLNQLSPGLAKRPWTQAEDLIIVQEHARLGNKWSEIAKKLEGRTDNAVKNRFNTTIRRQL 253          
BLAST of Ggra10192.t1 vs. uniprot
Match: Q7XZ94 (Transforming protein myb (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ94_GRIJA)

HSP 1 Score: 138 bits (348), Expect = 3.080e-36
Identity = 62/110 (56.36%), Postives = 81/110 (73.64%), Query Frame = 0
Query:  179 LGVPEPKAKRPWTEQEDRLLRSLVEQLGQGLWASIAAQIPGRSGKQVRERWLNHLSPNVTKRPWSNEEDDIIIENHRRFGNCWSRIAKLLEGRSDNSVKNRFYTTLKRRI 288
            LG+   K K PW  +ED +L  LV +LG   W  IA+ IPGR+GKQ RERWLN LSP++ KRPW+ EED ++++ H R GN WS IAKLL+GR+DN+ KNRF TT++R+I
Sbjct:    1 LGMVVRKVKGPWRPEEDAILTQLVAKLGPRRWTVIASHIPGRTGKQARERWLNQLSPDLAKRPWTPEEDRVVMQAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQI 110          
BLAST of Ggra10192.t1 vs. uniprot
Match: A0A7S0ZEF3 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEF3_9RHOD)

HSP 1 Score: 144 bits (364), Expect = 4.480e-36
Identity = 73/140 (52.14%), Postives = 95/140 (67.86%), Query Frame = 0
Query:  149 SCVADRPISVAMEPRNSCSEDSTGARATPALGVPEPKAKRPWTEQEDRLLRSLVEQLGQGLWASIAAQIPGRSGKQVRERWLNHLSPNVTKRPWSNEEDDIIIENHRRFGNCWSRIAKLLEGRSDNSVKNRFYTTLKRRI 288
            S + + P S  ++P+ + S  ST  +        E K K PW  +EDRLL SLVE+ G   W  IA++IPGR+GKQ RERWLN L+P++ KR W+ EED II+E H R GN WS IAK L+GR+DNSVKNRF TT++R+I
Sbjct:  275 SSIENMPHSDPIQPKGALSTHSTEHKDG------ESKVKGPWRPEEDRLLSSLVEKYGAKGWTVIASRIPGRTGKQARERWLNQLNPDLAKRTWTKEEDMIIMEMHARMGNRWSEIAKALKGRTDNSVKNRFNTTIRRQI 408          
BLAST of Ggra10192.t1 vs. uniprot
Match: A0A5J4YPN6 (Transcriptional activator Myb n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPN6_PORPP)

HSP 1 Score: 146 bits (368), Expect = 5.250e-36
Identity = 69/126 (54.76%), Postives = 89/126 (70.63%), Query Frame = 0
Query:  171 TGARATPALGVPE--------PKAKRPWTEQEDRLLRSLVEQLGQGLWASIAAQIPGRSGKQVRERWLNHLSPNVTKRPWSNEEDDIIIENHRRFGNCWSRIAKLLEGRSDNSVKNRFYTTLKRRI 288
            +G   TP  G  E        PK K PW  +EDRLL  LV + G   W +IAAQIPGR+GKQ RERWLNHL+P++T+RPW+ EED  I+E H + GN WS IAK+L+GR+DN+VKNRF TT++R++
Sbjct:  408 SGLAQTPLFGAAESESARESIPKVKGPWKAEEDRLLMDLVRKHGPKNWPTIAAQIPGRTGKQARERWLNHLNPDLTRRPWTAEEDLAIMEAHAKLGNRWSEIAKILDGRTDNAVKNRFNTTIRRQM 533          
BLAST of Ggra10192.t1 vs. uniprot
Match: A0A7S1XHT6 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHT6_9RHOD)

HSP 1 Score: 141 bits (355), Expect = 1.530e-35
Identity = 81/175 (46.29%), Postives = 101/175 (57.71%), Query Frame = 0
Query:  128 APTQPQVQQQSRA-QLRHFSSHSCVADRPISVAMEPRNSCSEDSTGARATPALG-------------VPEPKAKRPWTEQEDRLLRSLVEQLGQGLWASIAAQIPGRSGKQVRERWLNHLSPNVTKRPWSNEEDDIIIENHRRFGNCWSRIAKLLEGRSDNSVKNRFYTTLKRRI 288
            +PT P ++  S + Q R FS +  V       ++ P         G RA+PAL                E K K PW  QED LL+ LVE+ G   W  IA  IPGRSGKQ RERWLN LSP + KRPW+  ED II++ H R GN WS IAK LEGR+DN+VKNRF TT++R++
Sbjct:  171 SPTLPPIELGSHSRQERGFSRYPSVLP-----SLSPVTEIKHQQ-GNRASPALEQTLQETDDAPVRTTQEVKVKGPWRPQEDELLQRLVEKYGAKRWTLIANSIPGRSGKQARERWLNQLSPGLAKRPWTQAEDLIIVQEHARLGNKWSEIAKKLEGRTDNAVKNRFNTTIRRQL 339          
BLAST of Ggra10192.t1 vs. uniprot
Match: A0A7S2ZT13 (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT13_9RHOD)

HSP 1 Score: 134 bits (338), Expect = 5.390e-35
Identity = 62/105 (59.05%), Postives = 77/105 (73.33%), Query Frame = 0
Query:  184 PKAKRPWTEQEDRLLRSLVEQLGQGLWASIAAQIPGRSGKQVRERWLNHLSPNVTKRPWSNEEDDIIIENHRRFGNCWSRIAKLLEGRSDNSVKNRFYTTLKRRI 288
            P+ KR WT+ ED LLRSLVE+ G   W  IA  IPGR+GKQ RERWLN L P + ++ W+ EED III  H ++GN WS IA  L+GR+DNS+KNRF +TLKRR+
Sbjct:   58 PRGKRAWTKAEDVLLRSLVEKHGPNRWTLIAKNIPGRTGKQARERWLNQLDPELKRKGWTAEEDQIIIRAHAQYGNKWSLIASQLKGRTDNSIKNRFNSTLKRRL 162          
BLAST of Ggra10192.t1 vs. uniprot
Match: A0A7S2ZT18 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT18_9RHOD)

HSP 1 Score: 134 bits (338), Expect = 2.640e-34
Identity = 62/105 (59.05%), Postives = 77/105 (73.33%), Query Frame = 0
Query:  184 PKAKRPWTEQEDRLLRSLVEQLGQGLWASIAAQIPGRSGKQVRERWLNHLSPNVTKRPWSNEEDDIIIENHRRFGNCWSRIAKLLEGRSDNSVKNRFYTTLKRRI 288
            P+ KR WT+ ED LLRSLVE+ G   W  IA  IPGR+GKQ RERWLN L P + ++ W+ EED III  H ++GN WS IA  L+GR+DNS+KNRF +TLKRR+
Sbjct:   58 PRGKRAWTKAEDVLLRSLVEKHGPNRWTLIAKNIPGRTGKQARERWLNQLDPELKRKGWTAEEDQIIIRAHAQYGNKWSLIASQLKGRTDNSIKNRFNSTLKRRL 162          
BLAST of Ggra10192.t1 vs. uniprot
Match: A0A2V3IFU1 (Myb-related protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFU1_9FLOR)

HSP 1 Score: 139 bits (351), Expect = 4.090e-34
Identity = 66/115 (57.39%), Postives = 83/115 (72.17%), Query Frame = 0
Query:  175 ATPALGVPEP-KAKRPWTEQEDRLLRSLVEQLGQGLWASIAAQIPGRSGKQVRERWLNHLSPNVTKRPWSNEEDDIIIENHRRFGNCWSRIAKLLEGRSDNSVKNRFYTTLKRRI 288
            A PA  V  P K K PW  +ED +L  LV + G   W  IA+ IPGR+GKQ RERWLN LSP++TKRPW+ EED I+++ H R GN WS IAKLL+GR+DN+ KNRF TT++R+I
Sbjct:  257 AAPAPTVTPPRKIKGPWRPEEDTILTDLVNRFGARRWTLIASHIPGRTGKQARERWLNQLSPHLTKRPWTPEEDRIVMDAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQI 371          
The following BLAST results are available for this feature:
BLAST of Ggra10192.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IP672.250e-6044.94Transcription factor MYB44 n=1 Tax=Gracilariopsis ... [more]
A0A5J4Z7G31.320e-3752.52Myb-related protein A n=1 Tax=Porphyridium purpure... [more]
A0A7S1TIW22.070e-3646.29Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
Q7XZ943.080e-3656.36Transforming protein myb (Fragment) n=1 Tax=Griffi... [more]
A0A7S0ZEF34.480e-3652.14Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YPN65.250e-3654.76Transcriptional activator Myb n=1 Tax=Porphyridium... [more]
A0A7S1XHT61.530e-3546.29Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2ZT135.390e-3559.05Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]
A0A7S2ZT182.640e-3459.05Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A2V3IFU14.090e-3457.39Myb-related protein A n=1 Tax=Gracilariopsis chord... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 238..286
e-value: 1.1E-15
score: 68.1
coord: 186..235
e-value: 8.9E-17
score: 71.7
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 234..284
score: 10.057746
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 182..233
score: 11.462847
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 189..233
e-value: 3.7439E-15
score: 66.445
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 241..284
e-value: 2.75599E-12
score: 58.741
NoneNo IPR availableGENE3D1.10.10.60coord: 240..316
e-value: 2.4E-19
score: 71.1
NoneNo IPR availableGENE3D1.10.10.60coord: 187..238
e-value: 1.0E-20
score: 75.4
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 190..247
e-value: 2.1E-16
score: 59.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..189
NoneNo IPR availablePANTHERPTHR45614:SF154TRANSCRIPTION FACTOR MYB98coord: 141..311
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 141..311
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 239..288
score: 21.362074
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 185..237
score: 23.652872
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 185..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:56379..57365 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10192.t1Ggra10192.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 56379..57365 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10192.t1 ID=Ggra10192.t1|Name=Ggra10192.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=329bp
MPPLVTSSALPLPPPPQIADVPARYHKMSVQNLVCPPLPTMPPPPVPSHH
VSFSSELHFSSRTSRYSQQLPQITPLPSSSPTAPPPPPMLSPTLKALPIS
HPLPPLLPHGLSSHTSLYRNQDYAKQHAPTQPQVQQQSRAQLRHFSSHSC
VADRPISVAMEPRNSCSEDSTGARATPALGVPEPKAKRPWTEQEDRLLRS
LVEQLGQGLWASIAAQIPGRSGKQVRERWLNHLSPNVTKRPWSNEEDDII
IENHRRFGNCWSRIAKLLEGRSDNSVKNRFYTTLKRRIHTSRTMNRTFSG
KRNRSQQTNSDDSSELPHQKLKQNRVWE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf