Ggra10190.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra10190.t1
Unique Name	Ggra10190.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	457

Homology

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BLAST of Ggra10190.t1 vs. uniprot
Match: A0A2V3IHC1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHC1_9FLOR)

HSP 1 Score: 279 bits (713), Expect = 1.610e-86
Identity = 187/406 (46.06%), Postives = 223/406 (54.93%), Query Frame = 0

Query:   53 PTRRASLLASIRALALPTASRAGADADADGAXXXXXXXXGXXXAAPSLLSRTSALFSRRSLLHARRSEPDATPLRHLISPPARYARDADDAQLHTACSSLHALRTRASWFGLAPGASPRRRTSRDAQLLEWEQLIRLPRLHVVRRAAQKRVFAAPAFTLAPYDRRAPADAVALYTNALRAESRTLLFLLFCLHERQPRLEKGDVLSLFLWLQPYVRFVHAVLALLAQHWLPRLQLRGAFAAHAPYAFFTHASSRLARTLSKLLSHQRRFVQSAPPLAARKLRQLLEPYAHLLLRYCVQLDAVSAPFLRRNFTEQQTHV--LGKQLVAELKHMAHFSSNLVLLLRWLSNRPETASYWRRDHLDGITAVRYTQWKKARKQHEIVCYFANKARAFPCDRYYEDATLPTF 456
            P RRASL AS R+   P + RA A                   A P+L SRTS LF RR+      S P+ TPLR L+ PP+RY    DDA L  A S+L + RT  S   +   A  RRRTS DA L EW  LI LP L+V  R   + VF +PAF L  Y RR   D VALYTNALRAESRTL  LL CLHER   L++GD+ S F+W +PY  FV AV++L  +  LP L     F   +    F   +  L   LSKLL H    V   P     KL  L +PYA  LL Y   L+ +  P L  +  +   H   L KQL A  +   HFS+NLV LLRWL+ RP+TA+YWRRDHLD  TA+RYTQWKK     EIV YFA+ +  FP    YED  LPTF
Sbjct:   18 PARRASLFASFRSQ--PASPRADA-------------------APPTLFSRTSQLFLRRA---TAASPPNPTPLRALVHPPSRYVATHDDA-LTRAHSALSSRRTTLSVRAVVAPAQ-RRRTSADAALHEWHALICLPNLNVALRPPTRPVFCSPAFRLVSYGRRPEYDLVALYTNALRAESRTLFLLLLCLHERCHSLQRGDLSSFFIWFEPYAHFVLAVVSLFQRFLLPHLHQLKPFQLQS----FAQLAEMLQTPLSKLLKHNNAVVNCNPRKVPHKLLTLFKPYAQHLLTYAHNLEHIC-PALIHDAHQTPPHKTQLSKQLFAHFRKQPHFSTNLVRLLRWLAARPQTAAYWRRDHLDAATAIRYTQWKKTGPCEEIVQYFAHNSDVFPYSSLYEDPQLPTF 392

The following BLAST results are available for this feature:

BLAST of Ggra10190.t1 vs. uniprot

BLAST of Ggra10190.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IHC1	1.610e-86	46.06	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..97
None	No IPR available	SUPERFAMILY	81995	beta-sandwich domain of Sec23/24	coord: 16..53

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000016_pilon	contig	tig00000016_pilon:51882..53252 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra10190.t1	Ggra10190.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000016_pilon 51882..53252 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra10190.t1 ID=Ggra10190.t1|Name=Ggra10190.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=457bp
MQRAREPPSAERLLSQPQQPQQPQQPQQPQQPQQPQQQLLPPPAEQLVLQ
QQPTRRASLLASIRALALPTASRAGADADADGADGADGADGGADGAAPSL
LSRTSALFSRRSLLHARRSEPDATPLRHLISPPARYARDADDAQLHTACS
SLHALRTRASWFGLAPGASPRRRTSRDAQLLEWEQLIRLPRLHVVRRAAQ
KRVFAAPAFTLAPYDRRAPADAVALYTNALRAESRTLLFLLFCLHERQPR
LEKGDVLSLFLWLQPYVRFVHAVLALLAQHWLPRLQLRGAFAAHAPYAFF
THASSRLARTLSKLLSHQRRFVQSAPPLAARKLRQLLEPYAHLLLRYCVQ
LDAVSAPFLRRNFTEQQTHVLGKQLVAELKHMAHFSSNLVLLLRWLSNRP
ETASYWRRDHLDGITAVRYTQWKKARKQHEIVCYFANKARAFPCDRYYED
ATLPTF*