Ggra10186.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10186.t1
Unique NameGgra10186.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length465
Homology
BLAST of Ggra10186.t1 vs. uniprot
Match: A0A2V3IH87 (Serine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH87_9FLOR)

HSP 1 Score: 847 bits (2188), Expect = 4.960e-309
Identity = 409/464 (88.15%), Postives = 438/464 (94.40%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRYKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQMKEIKIKGRKPETNIDPDGSKEAKIKQEKEILAKDEAQLKERITVIEKERDTVLKSIGNVLHHTVPVFDDEEHNRVERVWPETGEQPPAPGKGLTHVDLLYMIGGVEYTRGVTCAGSRGYYLMGPAVMLNMAIIQYSLRFLSERGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVTGDGDKYLIATSEQPICVYHADEWVEERNLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKYDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILESYQTESGITVPEVLRPLMGMDEIPFVRDAPKIKVKGAKKK 464
            MLDINLFREDRGGNPE+VRESQRRR+KKESLVDDVIKWDK+WR+VRYDLDCISKKRNELN Q+KEIKIKG+KPETNIDPDGSKEA IK++K+ L  DEA LKE++ V E ERDT+LKSIGNVLHHTVPV +DEE NRVERVWPE+GE+P A GK LTHVDLLYMIGGVEY+RGVTCAGSRGYYLMGPAVMLNMAIIQYSLRFLSERGY  IQPPYFMEKDQMAKCAQLDDFDEQLYKV+GDGDKYLIATSEQPICVYHADEWVEE+ LPRK+AGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNASY+MLETMIHNAEEFYQTLGLTYQ ISIVS AMNDAASKKYDLEAWFP ASGGKGEYRELVSASNCTDYQSRKLETRCG+KKMGDTNKRYVHMLNSTLCATTRTICCILE+YQ E G+ VPEVL+P +GMD +PFVR+APKIK+K +KKK
Sbjct:    1 MLDINLFREDRGGNPEIVRESQRRRFKKESLVDDVIKWDKQWRAVRYDLDCISKKRNELNAQLKEIKIKGKKPETNIDPDGSKEANIKEQKQTLVADEADLKEKLAVAEHERDTILKSIGNVLHHTVPVAEDEEQNRVERVWPESGERPAAGGKRLTHVDLLYMIGGVEYSRGVTCAGSRGYYLMGPAVMLNMAIIQYSLRFLSERGYNPIQPPYFMEKDQMAKCAQLDDFDEQLYKVSGDGDKYLIATSEQPICVYHADEWVEEKELPRKYAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNASYDMLETMIHNAEEFYQTLGLTYQTISIVSKAMNDAASKKYDLEAWFPAASGGKGEYRELVSASNCTDYQSRKLETRCGVKKMGDTNKRYVHMLNSTLCATTRTICCILETYQREDGVAVPEVLQPYLGMDFLPFVREAPKIKIKSSKKK 464          
BLAST of Ggra10186.t1 vs. uniprot
Match: R7Q7E0 (Serine--tRNA ligase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7E0_CHOCR)

HSP 1 Score: 773 bits (1996), Expect = 8.430e-280
Identity = 373/463 (80.56%), Postives = 413/463 (89.20%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRYKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQMKEIKIKGRKPETNIDPDGSKEAKIKQEKEILAKDEAQLKERITVIEKERDTVLKSIGNVLHHTVPVFDDEEHNRVERVWPETGEQPPAPGKGLTHVDLLYMIGGVEYTRGVTCAGSRGYYLMGPAVMLNMAIIQYSLRFLSERGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVTGDGDKYLIATSEQPICVYHADEWVEERNLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKYDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILESYQTESGITVPEVLRPLMGMDEIPFVRDAPKIKVKGAKK 463
            MLDINLFREDRGGNP+LVRESQRRR+K  SLVD+V+KWD EWRSVRYDLDC SK+RN LN +MK+IKIKGR PETNIDPDG+KEA IK  K  LA  E   KER+ VIEKERD  LK IGN+LHHTVPV  DEEHNRVER++P +GE P  PGKGLTHVDLL+MIGGVEY RGV+ AGSRGY+L GP VMLN A+IQY+L FL+ERGYTA+QPPYFMEK+QMAKCAQLDDFDE+LYKV+GDGDKYLIATSEQP+C YH DEWV+ER LPRKFAG STNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDN SYEMLETM+ NAEEFYQ++GL+YQVISIVSGAMND+A+KKYD+EAWFPGAS GKGEYRELVSASNCTD+Q+RKLETRCG KKMGDTNKRYVHMLN+TLCA TR ICCILE++QTE GITVPEVLR  +G D IPFVRD PK+KVK +KK
Sbjct:    1 MLDINLFREDRGGNPDLVRESQRRRFKDVSLVDEVMKWDAEWRSVRYDLDCASKERNSLNNEMKQIKIKGRNPETNIDPDGTKEAAIKAAKAELATGEGAKKERLVVIEKERDAALKQIGNLLHHTVPVEKDEEHNRVERMFPPSGELPKLPGKGLTHVDLLHMIGGVEYARGVSTAGSRGYFLKGPGVMLNFALIQYALNFLTERGYTAVQPPYFMEKEQMAKCAQLDDFDEELYKVSGDGDKYLIATSEQPLCTYHVDEWVDERELPRKFAGVSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNLSYEMLETMVKNAEEFYQSIGLSYQVISIVSGAMNDSAAKKYDIEAWFPGASDGKGEYRELVSASNCTDFQARKLETRCGSKKMGDTNKRYVHMLNATLCAVTRVICCILETFQTEEGITVPEVLRAFVGSDFIPFVRDPPKLKVKKSKK 463          
BLAST of Ggra10186.t1 vs. uniprot
Match: A0A1X6P2W4 (Serine--tRNA ligase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2W4_PORUM)

HSP 1 Score: 524 bits (1349), Expect = 8.750e-182
Identity = 270/460 (58.70%), Postives = 339/460 (73.70%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRYKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQMKEIK--IKGRKPETNIDPD-GSKEAKIKQEKEILAKDEAQLKERITVIEKERDTVLKSIGNVLHHTVPVFDDEEHNRVERVWPETGEQPPAPGKGLTHVDLLYMIGGVEYTRGVTCAGSRGYYLMGPAVMLNMAIIQYSLRFLSERGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVTGDGD-KYLIATSEQPICVYHADEWVEERNLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKYDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILESYQTESGITVPEVLRPLMGMDEIPFVRDAPKI 456
            MLDINLFR ++GGNPELVRESQRRR++KE +V++VI  D EWR  +Y LD   ++R  LN   K IK   K ++  + +  + G+ EA+I     ++ + EA            RDT+L  IGN++  + PV + E++N VER W E GE   APGK   HVDLL+MIGGVEY RG   AG+RGY+L GP   LNMA+  Y ++FL+ RG+TA+Q PYFMEK +MAKCAQL+DFDEQLYKV+GDGD KYL+ATSEQP+C YHA E V+ R+LP ++A FST FRKE GSHGRD LGIFRVHQFDK+EQF VT+PD + S+  +E +I N+EEFYQ LGL Y+V+ IVSG +N AA+KKYDLE W+P +    GEYRELVS SNCTDYQ+R+L TR G KK G+ + R+VHMLNSTLCATTR +CCILE+YQT+ G+TVPE LRPL+G D  PF R APK+
Sbjct:    1 MLDINLFRTEKGGNPELVRESQRRRFEKEEVVNEVIAADGEWRRAQYKLD---EERKALNALQKRIKGLFKAKEDASGLLAEKGTIEARIAAASAVVGEKEAA-----------RDTLLGGIGNLVADSAPVDNSEDNNSVERTWGEAGE---APGKRRNHVDLLHMIGGVEYKRGTAVAGNRGYFLKGPGARLNMALATYGVQFLAARGFTAMQTPYFMEKGEMAKCAQLEDFDEQLYKVSGDGDDKYLVATSEQPMCAYHAAENVDPRDLPTRYASFSTCFRKETGSHGRDTLGIFRVHQFDKVEQFVVTTPDGDESWAEMERLITNSEEFYQGLGLPYRVVGIVSGKLNKAAAKKYDLEGWYPSS----GEYRELVSCSNCTDYQARRLGTRFGHKKAGERDPRFVHMLNSTLCATTRVLCCILENYQTDDGVTVPEPLRPLVGADFFPFTRPAPKV 439          
BLAST of Ggra10186.t1 vs. uniprot
Match: A0A7S0ZG99 (Serine--tRNA ligase (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZG99_9RHOD)

HSP 1 Score: 513 bits (1321), Expect = 1.020e-177
Identity = 263/446 (58.97%), Postives = 334/446 (74.89%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRYKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQMKEI--KIKGRKPETNIDPDGSKEAKIKQEKEILAKDEAQLKERITVIEKERDTVLKSIGNVLHHTVPVFDDEEHNRVERVWPETGEQPPAPGKGLTHVDLLYMIGGVEYTRGVTCAGSRGYYLMGPAVMLNMAIIQYSLRFLSERGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVTGDG-DKYLIATSEQPICVYHADEWVEERNLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKYDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILESYQTESGITVPEVLRPLMG 443
            MLDI LFR ++GGNPE+VRESQRRRY    +VD+VI  D+ WR  ++ +D +   R +LN   KEI  ++K ++  + +       AK K+ K  +A+ EAQ    +  IE+ERDT LKSIGN++  +V V D+E+ N V R W   GE     G  + HVDLL+ I GVEY RGV  AGSRGY+L G   +LN+A+IQY ++FL E+ Y  IQPPYFMEK+ MAKCAQLDDFDEQLYKV+G+G DKYLIATSEQP+C YH +EW++ + LP+K+ GFST FRKE GSHGRD LGIFRVHQF+K+EQF VTSP+D  S+E+++ MI NAE FYQ+LG+ Y+V++IVSGA+N+AA+KK+DLE WFP ++     YRELVS SNCTDYQSR+LETR G KKMGD  K+YVHMLNSTLCATTR IC ILE+YQT+ G+ VPEVL+P +G
Sbjct:    1 MLDIKLFRGEQGGNPEVVRESQRRRYADPGIVDEVIALDELWRQQKFMVDGL---RKDLNSNSKEIGKRMKAKEDASELT------AKTKEIKAQIAECEAQ----VIKIEEERDTKLKSIGNLVPDSVFVSDNEDLNPVVRTW---GEPKSPGGPKMNHVDLLHRIDGVEYARGVNVAGSRGYFLKGNGALLNLALIQYGMKFLIEQDYVPIQPPYFMEKETMAKCAQLDDFDEQLYKVSGEGGDKYLIATSEQPLCAYHLNEWIDPKTLPKKYVGFSTCFRKETGSHGRDTLGIFRVHQFEKLEQFVVTSPEDGISWEVMDAMIENAERFYQSLGIPYRVVNIVSGALNNAAAKKFDLEGWFPAST----TYRELVSCSNCTDYQSRRLETRYGNKKMGDREKKYVHMLNSTLCATTRVICAILENYQTDEGVQVPEVLQPYIG 426          
BLAST of Ggra10186.t1 vs. uniprot
Match: M2W1W8 (Serine--tRNA ligase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W1W8_GALSU)

HSP 1 Score: 514 bits (1325), Expect = 4.820e-177
Identity = 265/460 (57.61%), Postives = 332/460 (72.17%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRYKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQMKEIKIKGRKPETNIDPDG--SKEAKIKQEKEILAKDEAQLKERITVIEKERDTVLKSIGNVLHHTVPVFDDEEHNRVERVWPETGEQPPAPGKGLTHVDLLYMIGGVEYTRGVTCAGSRGYYLMGPAVMLNMAIIQYSLRFLSERGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVTGDG--DKYLIATSEQPICVYHADEWVEERNLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKYDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILESYQTESGITVPEVLRPLMGMDEIPFVRDAPKI 456
            MLDIN FR ++GG+P+++ ESQR+R+  E  V  VI+ D+EWR  RY  D +   R +LN   KEI   G+K   N D      K A+IK    +  K       RI  +E +RDT+LKSIGN++H +V V  DE  N V R W +   +     KG  HVDLLYMI GVEY +GV+ AG+RGYYL GPAV  N+ +I Y L+FL ++GY  +Q PYFME+D MAKCAQL+DFDEQLYKVTG+G  +KYLIATSEQPIC YH +EW++ + LP ++ GFST FRKE GSHGRD LGIFRVHQF+K+EQFC+T+PD   SY M+E M+H AEEFYQ+L + Y+V++IVSGA+N+AA+KKYDLE WFP +S     +RELVS SNCTDYQ+R+LE R G+KKMGD  K+YVHMLNSTLCATTR ICCILE+YQT  GI VPEVL+P +G   +PF R+  KI
Sbjct:   52 MLDINWFRTEKGGDPKVILESQRKRFASEEKVLKVIELDEEWRKNRYQGDQL---RKQLNATSKEI---GQKKRNNEDATELMEKVAEIKNSISVTEK-------RIEELEFQRDTLLKSIGNIVHESVFVSQDESENPVLRQWGDFSSEK----KGYNHVDLLYMIDGVEYEKGVSVAGNRGYYLKGPAVAFNLGLIHYGLQFLVKKGYLPLQTPYFMERDAMAKCAQLEDFDEQLYKVTGEGTQEKYLIATSEQPICCYHMNEWLDPKTLPLRYVGFSTCFRKETGSHGRDTLGIFRVHQFEKLEQFCITAPDPAVSYAMMEEMMHVAEEFYQSLNIPYRVVNIVSGALNNAAAKKYDLEGWFPASSA----FRELVSCSNCTDYQARRLEVRYGLKKMGDREKKYVHMLNSTLCATTRVICCILENYQTADGIKVPEVLQPFVGSSFLPFKREPLKI 490          
BLAST of Ggra10186.t1 vs. uniprot
Match: A0A5J4YVX6 (Serine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVX6_PORPP)

HSP 1 Score: 501 bits (1290), Expect = 1.150e-172
Identity = 264/458 (57.64%), Postives = 333/458 (72.71%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRYKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQMKEIKIKGRKPETNIDPDGSKEAKIKQEKEILAKDEAQLKERITVIEKERDTVLKSIGNVLHHTVPVFDDEEHNRVERVWPETGEQPPAPGKGLTHVDLLYMIGGVEYTRGVTCAGSRGYYLMGPAVMLNMAIIQYSLRFLSERGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVTGDG-DKYLIATSEQPICVYHADEWVEERNLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKYDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCG-IKKMGDTNK-RYVHMLNSTLCATTRTICCILESYQTESGITVPEVLRPLMGMDE-IPFVRDAP 454
            ML++ LFR D+GG+PE VRESQRRR+K   LVD VI+ D+    VR + D + K  NE +  + ++K + +  E  +  D     K     EI  K+E + K  IT+    RD  ++ IGN++  +VPV  DE  N+VER W E G    A G GL HVDLL+ IGGVEY RGVT AGSRGY+L+G  V+LN+A+I Y + FL+ RG+ A+QPPYFME+D MAKCAQLDDFDEQLYKV+GDG DKYLIATSEQP+CVYH DEW+  ++LP K+ G ST FRKE GSHGRD LGIFRVHQF+K+EQF V SP+ + S+ +++ M+ NAEEFYQ LG+ Y+V++IVSGA+N+AA+KKYDLE WFP ++     YRELVS SNCTDYQ+R+LE R G  KK GD  + ++VHMLNSTLCATTR IC ILE+YQT  G+ VPEVL+P MG    +PFVRDAP
Sbjct:    1 MLELQLFRTDKGGDPEKVRESQRRRFKDVGLVDKVIELDEAHLKVRKEADNLRKDMNEKSKMVGKLKKEKKDDEAQVIMDQVPAIK----NEIKDKEE-EAKRLITM----RDETIRMIGNLVPDSVPVSQDENENKVERTWGEPGA---AAGDGLNHVDLLHRIGGVEYERGVTAAGSRGYFLVGDGVLLNLALIHYGVHFLTTRGHIAVQPPYFMERDAMAKCAQLDDFDEQLYKVSGDGGDKYLIATSEQPLCVYHMDEWIAVQSLPLKYVGVSTCFRKETGSHGRDTLGIFRVHQFEKLEQFVVCSPEGDESWTIMDEMLGNAEEFYQALGIPYRVVNIVSGALNNAAAKKYDLEGWFPAST----TYRELVSCSNCTDYQARRLEVRYGQTKKQGDARESKFVHMLNSTLCATTRVICAILENYQTSEGVRVPEVLQPYMGGKSFLPFVRDAP 442          
BLAST of Ggra10186.t1 vs. uniprot
Match: M5VY64 (Serine--tRNA ligase n=4 Tax=Prunus TaxID=3754 RepID=M5VY64_PRUPE)

HSP 1 Score: 488 bits (1257), Expect = 1.050e-167
Identity = 247/465 (53.12%), Postives = 335/465 (72.04%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRYKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQMKEIKIKGRKPETNIDPDGSKEAKIKQEKEILAKDEAQLKERITVIEKERDTVLKSIGNVLHHTVPVFDDEEHNRVERVWPETGEQPPAPGKGLTHVDLLYMIGGVEYTRGVTCAGSRGYYLMGPAVMLNMAIIQYSLRFLSERGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVTGDGD-KYLIATSEQPICVYHADEWVEERNLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKYDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILESYQTESGITVPEVLRPLMGMDEIPFVRDAPKIKVKGAKKK 464
            MLDINLFRE++G NPE++RESQRRR+K   +VD+VI+ DKEWR  +++L+ + K+ N++N ++ +++I G +  T +  D  +  ++  EKE+      +++E +T +  +    L+ IGN++H +VP+ +DEE+N V R W E   +P    K   HV+L+ ++G  +  +G   AG RG+YL G  V LN A+I + L FL +RGYT +Q P+FM KD MAKCAQL  FDE+LYKVTG+GD KYLIAT+EQP+C YH D+W+    LP ++AG+S+ FRKEAGSHGRD LGIFRVHQF+K+EQFC+TSPD + S+EM E MI N+E+FY++L L Y V++IVSGA+NDAA+KKYDLEAWFP +      YRELVS SNCTDYQSRKLETR G KK  +  K+YVH+LNSTL AT RT+CCILE+YQ E G+ +PEVL+P MG       ++ P  +VKG K K
Sbjct:    1 MLDINLFREEKGNNPEIIRESQRRRFKAVEIVDEVIQLDKEWRQRQFELENLRKEFNKINKRVAQLRIAG-EDATAVIKDTEENKRLAAEKEV------EVREALTQLNSK----LEVIGNLVHDSVPISNDEENNAVIRSWGEKRMEP----KLKNHVELVELLGIADLKKGAEVAGGRGFYLKGAGVRLNQALINFGLDFLEKRGYTELQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCSYHIDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPDGSDSWEMHEEMIKNSEDFYKSLNLPYHVVAIVSGALNDAAAKKYDLEAWFPASQ----TYRELVSCSNCTDYQSRKLETRYGQKKSNEQTKKYVHLLNSTLTATERTLCCILENYQREDGVDIPEVLQPFMGGKTFLPFKNKPAPEVKGKKSK 446          
BLAST of Ggra10186.t1 vs. uniprot
Match: A0A2Z6PDF9 (Serine--tRNA ligase n=9 Tax=Trifolium TaxID=3898 RepID=A0A2Z6PDF9_TRISU)

HSP 1 Score: 488 bits (1256), Expect = 1.480e-167
Identity = 251/465 (53.98%), Postives = 334/465 (71.83%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRYKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQMKEIKIKGRKPETNIDPDGSKEAKIKQEKEILAKDEAQLKERITVIEKERDTVLKSIGNVLHHTVPVFDDEEHNRVERVWPETGEQPPAPGKGLTHVDLLYMIGGVEYTRGVTCAGSRGYYLMGPAVMLNMAIIQYSLRFLSERGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVTGDGD-KYLIATSEQPICVYHADEWVEERNLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKYDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILESYQTESGITVPEVLRPLMGMDEIPFVRDAPKIKVKGAKKK 464
            MLDINLFRE++G NPEL+RESQRRR+    +VD++I  DKEWR  +Y+L+ + K+ N++N ++ ++K  G +  TN+  D S+EAK K     +A+ E + KE ++++  +    L++IGN++H +VPV +DE +N+V R W E   +P    K   HVDL+ ++G  +  +G   AG RGYYL G  V LN A+I + + FL +R YT +Q P+FM KD M+KCAQL  FDE+LYKVTG+GD KYLIAT+EQP+C YH D+W+    LP ++AG+ST FRKEAGSHGRD LGIFRVHQF+K+EQFC+TSP+DN S++M E M+ N+EEFY+ L + Y+V+SIVSGA+NDAA+KKYDLEAWFP +      YRELVS SNCTDYQSRKLE R G KK  +  K+YVH+LNSTL AT RTICCILE+ Q E G+ +PEVLRP MG       ++ P  + KG K K
Sbjct:    1 MLDINLFREEKGHNPELIRESQRRRFASVDVVDEIINLDKEWRKRQYELENLRKEVNKINKEVSKLKRAG-EDATNLIAD-SEEAKKK-----IAEKEVEAKEALSLMNSK----LETIGNLIHDSVPVDNDEANNQVVRTWGEKRVEP----KLKNHVDLVDLLGIADLKKGADVAGGRGYYLKGDGVRLNQALINFGIEFLEKREYTLLQTPFFMRKDIMSKCAQLAQFDEELYKVTGEGDEKYLIATAEQPLCAYHIDDWIHPTQLPLRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWDMHEEMLKNSEEFYKALNIPYRVVSIVSGALNDAAAKKYDLEAWFPASQ----TYRELVSCSNCTDYQSRKLEIRYGQKKSNEQLKQYVHLLNSTLTATERTICCILENNQKEDGVEIPEVLRPFMGGKTFLPFKNQPSNEAKGKKSK 446          
BLAST of Ggra10186.t1 vs. uniprot
Match: SYSC (Serine--tRNA ligase, cytoplasmic n=19 Tax=Brassicaceae TaxID=3700 RepID=SYSC_ARATH)

HSP 1 Score: 488 bits (1256), Expect = 1.700e-167
Identity = 250/467 (53.53%), Postives = 335/467 (71.73%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRYKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQMKEIKIKGRKPETNIDPDGSKEAKIKQEKEILAKDEAQLKERITVIEKERDTVLKSIGNVLHHTVPVFDDEEHNRVERVWPETGEQPPAPGKGL-THVDLLYMIGGVEYTRGVTCAGSRGYYLMGPAVMLNMAIIQYSLRFLSERGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVTGDGD-KYLIATSEQPICVYHADEWVEERNLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKYDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILESYQTESGITVPEVLRPLMGMDE-IPFVRDAPKIKVKGAKKK 464
            MLDINLFRE++G NPE++RESQRRR+    +VD++IK DKEWR  ++++D   K+ N+LN Q+ ++KIK       I      +   K +++  AK EA+++E    ++ +    L+ +GN++H +VPV  DE +N V ++W E  ++   PG  L  HVDL+ ++G  +  RG   AG+RG++L G  +MLN A+I + L FL +RG+T +QPP+FM KD MAKCAQL  FDE+LYKVTG+GD KYLIAT+EQP+C YH DEW+    LP ++AG+S+ FRKEAGSHGRD LGIFRVHQF+KIEQFC+T P++NAS+EML+ M+ N+E+FYQ L L YQ++SIVSGA+NDAA+KKYDLEAWFP +      +RELVS SNCTDYQ+R+LE R G KK  +  K+YVHMLNSTL AT RTICCILE+YQ E G+ +PEVL+P MG +  +PF         KG K K
Sbjct:    1 MLDINLFREEKGNNPEIIRESQRRRFASVEIVDEIIKLDKEWRQRQFEVDSFRKEFNKLNKQVAQLKIKKEDASEII------QQTEKNKQDSTAK-EAEVREAYAALKAK----LEQVGNLVHDSVPVDKDEANNLVIKLWGE--KRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLMLNQALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHIDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSE----TFRELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCILENYQREDGVDIPEVLQPFMGGETFLPFKAKPVVADTKGKKSK 450          
BLAST of Ggra10186.t1 vs. uniprot
Match: A0A0A0KL58 (Serine--tRNA ligase n=9 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0KL58_CUCSA)

HSP 1 Score: 487 bits (1253), Expect = 4.380e-167
Identity = 247/444 (55.63%), Postives = 322/444 (72.52%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRYKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQMKEIKIKGRKPETNIDPDGSKEAKIKQEKEILAKDEAQLKERITVIEKERDTVLKSIGNVLHHTVPVFDDEEHNRVERVWPETGEQPPAPGKGLTHVDLLYMIGGVEYTRGVTCAGSRGYYLMGPAVMLNMAIIQYSLRFLSERGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVTGDGD-KYLIATSEQPICVYHADEWVEERNLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKYDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILESYQTESGITVPEVLRPLMG 443
            MLDINLFRE++G NPE++RESQRRR+    LVD+VIK DKEWR  +++L+ + K+ N++N Q+ +++I G      I  D  +  K+  EK++ AKD          + K+ ++ L+ IGN++H +VPV +DE +N V R W E   +P    K   HVDL+ ++   +  RG   AG RGYYL G  V LN A+I Y L FL +RGYT +Q P+FM KD MA+CAQL  FDE+LYKVTG+GD KYLIAT+EQP+C YH ++W+    LP ++AG+S+ FRKEAGSHGRD LGIFRVHQF+K+EQFC+TSP+DN S++M E MI N+EEFY+TL + YQV++IVSGA+NDAA+KKYDLEAWFP +      YRELVS SNCTDYQSR+LE R G KK  +  K+YVH+LNSTL AT RT+CCILE+YQ E G+ VPEVLRP +G
Sbjct:    1 MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKINKQIAQLRIAGEDASERI-KDTEENKKLSAEKDVEAKD----------VLKKLNSKLEIIGNLVHDSVPVSNDEANNVVIRSWGEKLVKP----KLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQALINYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQ----TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTLCCILENYQKEDGVEVPEVLRPYLG 425          
The following BLAST results are available for this feature:
BLAST of Ggra10186.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH874.960e-30988.15Serine--tRNA ligase n=1 Tax=Gracilariopsis chorda ... [more]
R7Q7E08.430e-28080.56Serine--tRNA ligase n=1 Tax=Chondrus crispus TaxID... [more]
A0A1X6P2W48.750e-18258.70Serine--tRNA ligase n=1 Tax=Porphyra umbilicalis T... [more]
A0A7S0ZG991.020e-17758.97Serine--tRNA ligase (Fragment) n=1 Tax=Timspurckia... [more]
M2W1W84.820e-17757.61Serine--tRNA ligase n=1 Tax=Galdieria sulphuraria ... [more]
A0A5J4YVX61.150e-17257.64Serine--tRNA ligase n=1 Tax=Porphyridium purpureum... [more]
M5VY641.050e-16753.12Serine--tRNA ligase n=4 Tax=Prunus TaxID=3754 RepI... [more]
A0A2Z6PDF91.480e-16753.98Serine--tRNA ligase n=9 Tax=Trifolium TaxID=3898 R... [more]
SYSC1.700e-16753.53Serine--tRNA ligase, cytoplasmic n=19 Tax=Brassica... [more]
A0A0A0KL584.380e-16755.63Serine--tRNA ligase n=9 Tax=Cucurbitaceae TaxID=36... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..69
NoneNo IPR availableCOILSCoilCoilcoord: 91..111
IPR002317Serine-tRNA ligase, type1PRINTSPR00981TRNASYNTHSERcoord: 375..391
score: 57.08
coord: 294..307
score: 59.79
coord: 336..349
score: 32.01
coord: 282..294
score: 61.25
coord: 353..369
score: 48.15
IPR002317Serine-tRNA ligase, type1TIGRFAMTIGR00414TIGR00414coord: 1..442
e-value: 2.8E-124
score: 413.3
IPR002317Serine-tRNA ligase, type1PIRSFPIRSF001529Ser-tRNA_ligasecoord: 1..451
e-value: 9.2E-146
score: 483.7
IPR002317Serine-tRNA ligase, type1PANTHERPTHR11778SERYL-TRNA SYNTHETASEcoord: 1..450
IPR045864Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)GENE3D3.30.930.10Bira Bifunctional Protein; Domain 2coord: 121..455
e-value: 5.5E-125
score: 418.8
IPR045864Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)SUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 144..447
IPR042103Serine-tRNA synthetase, type1, N-terminal domain superfamilyGENE3D1.10.287.40coord: 1..120
e-value: 2.5E-25
score: 91.0
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)PFAMPF00587tRNA-synt_2bcoord: 241..426
e-value: 2.8E-32
score: 112.1
IPR015866Serine-tRNA synthetase, type1, N-terminalPFAMPF02403Seryl_tRNA_Ncoord: 1..122
e-value: 1.7E-18
score: 66.8
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 195..435
score: 20.040789
IPR033729Serine-tRNA ligase catalytic core domainCDDcd00770SerRS_corecoord: 136..442
e-value: 1.14397E-160
score: 454.325
IPR010978Class I and II aminoacyl-tRNA synthetase, tRNA-binding armSUPERFAMILY46589tRNA-binding armcoord: 1..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:38175..39569 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10186.t1Ggra10186.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 38175..39569 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10186.t1 ID=Ggra10186.t1|Name=Ggra10186.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=465bp
MLDINLFREDRGGNPELVRESQRRRYKKESLVDDVIKWDKEWRSVRYDLD
CISKKRNELNGQMKEIKIKGRKPETNIDPDGSKEAKIKQEKEILAKDEAQ
LKERITVIEKERDTVLKSIGNVLHHTVPVFDDEEHNRVERVWPETGEQPP
APGKGLTHVDLLYMIGGVEYTRGVTCAGSRGYYLMGPAVMLNMAIIQYSL
RFLSERGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVTGDGDKYLIATS
EQPICVYHADEWVEERNLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFD
KIEQFCVTSPDDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDA
ASKKYDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDT
NKRYVHMLNSTLCATTRTICCILESYQTESGITVPEVLRPLMGMDEIPFV
RDAPKIKVKGAKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002317Ser-tRNA-ligase_type_1
IPR045864aa-tRNA-synth_II/BPL/LPL
IPR042103SerRS_1_N_sf
IPR002314aa-tRNA-synt_IIb
IPR015866Ser-tRNA-synth_1_N
IPR006195aa-tRNA-synth_II
IPR033729SerRS_core
IPR010978tRNA-bd_arm