Ggra10119.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10119.t1
Unique NameGgra10119.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length360
Homology
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BLAST of Ggra10119.t1 vs. uniprot
Match: A0A2V3IIH2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIH2_9FLOR)

HSP 1 Score: 146 bits (369), Expect = 4.180e-39
Identity = 74/160 (46.25%), Postives = 108/160 (67.50%), Query Frame = 0 
Query:  198 SAKKSIAFAIGVVQVIRYAGGDVDAATQLLSKHTRYVYNAAICLRKSASDLPIPKVALDHLIEHSKDILSIALDDLYNKNPGHFLQYYQYHLPAPTELENIQYISAPPLRMFGGLVDQFASISSGGLATSYLDFETSHGTSLTVRLTEDLLCSTNPYDYL 357
            SA  + A+AI VVQ++R+A GD+ AAT+LL +H + VY++++CL KS  +LPIP    D L   SK ++  +L+ L+ K+P  FLQ+YQY+LPAP ++EN   I++    M+  LVDQF+S  S G   +YLD++   G S   RLTE+LL ST+PY +L
Sbjct:   26 SAALTTAYAISVVQIVRFANGDIKAATRLLQQHVQKVYDSSLCLGKSGDNLPIPASTFDQLSRQSKLLVGRSLEKLH-KSPVSFLQFYQYYLPAPNDMENFHQIASLAYSMYPELVDQFSSTLSAGQVQTYLDYKNYGGVSAVRRLTEELLASTSPYKFL 184
The following BLAST results are available for this feature:
BLAST of Ggra10119.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IIH24.180e-3946.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..359
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000113_piloncontigtig00000113_pilon:230166..231245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10119.t1Ggra10119.t1Gracilaria gracilis GNS1m malemRNAtig00000113_pilon 230166..231245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10119.t1 ID=Ggra10119.t1|Name=Ggra10119.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=360bp
MTLRTIALLVIALSSCLHPLRASECAPSTSRADFVRRAYDANLQFIRKGV
PAIAVDSFFRHAITNVIHKCSCNITSLNTLCARLDFDANHTDRRLLHVVT
KGFHEDQRVGRIRYFPLYHEQHLPEPLSHAVGDVVEVHAGALQQFLEPLN
SSQAALVQWSDRIFPSEDHLFRANSTITANACHAYGEHNKPNTTMYISAK
KSIAFAIGVVQVIRYAGGDVDAATQLLSKHTRYVYNAAICLRKSASDLPI
PKVALDHLIEHSKDILSIALDDLYNKNPGHFLQYYQYHLPAPTELENIQY
ISAPPLRMFGGLVDQFASISSGGLATSYLDFETSHGTSLTVRLTEDLLCS
TNPYDYLAV*
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