Ggra10119.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10119.t1
Unique NameGgra10119.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length360
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000113_piloncontigtig00000113_pilon:230166..231245 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10119Ggra10119Gracilaria gracilis GNS1m malegenetig00000113_pilon 230166..231245 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10119.t1.stop1Ggra10119.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000113_pilon 230166..230168 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10119.t1.CDS1Ggra10119.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000113_pilon 230166..231245 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10119.t1.exon1Ggra10119.t1.exon1Gracilaria gracilis GNS1m maleexontig00000113_pilon 230166..231245 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10119.t1.start1Ggra10119.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000113_pilon 231243..231245 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10119.t1Ggra10119.t1Gracilaria gracilis GNS1m malepolypeptidetig00000113_pilon 230166..231245 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10119.t1 ID=Ggra10119.t1|Name=Ggra10119.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=360bp
MTLRTIALLVIALSSCLHPLRASECAPSTSRADFVRRAYDANLQFIRKGV
PAIAVDSFFRHAITNVIHKCSCNITSLNTLCARLDFDANHTDRRLLHVVT
KGFHEDQRVGRIRYFPLYHEQHLPEPLSHAVGDVVEVHAGALQQFLEPLN
SSQAALVQWSDRIFPSEDHLFRANSTITANACHAYGEHNKPNTTMYISAK
KSIAFAIGVVQVIRYAGGDVDAATQLLSKHTRYVYNAAICLRKSASDLPI
PKVALDHLIEHSKDILSIALDDLYNKNPGHFLQYYQYHLPAPTELENIQY
ISAPPLRMFGGLVDQFASISSGGLATSYLDFETSHGTSLTVRLTEDLLCS
TNPYDYLAV*
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spliced messenger RNA

>Ggra10119.t1 ID=Ggra10119.t1|Name=Ggra10119.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1080bp|location=Sequence derived from alignment at tig00000113_pilon:230166..231245- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACCCTCCGCACCATCGCGTTGCTTGTGATCGCCCTATCGTCCTGTCT
CCACCCACTGCGCGCGTCGGAATGCGCGCCCTCGACTTCCCGTGCAGACT
TTGTGCGCCGCGCGTACGACGCCAACCTGCAGTTCATTCGAAAGGGTGTG
CCAGCCATTGCCGTTGACTCGTTCTTCCGCCACGCTATTACCAACGTCAT
TCATAAGTGCTCTTGCAATATCACCTCGCTCAATACACTGTGTGCGCGGT
TGGACTTCGATGCCAATCACACTGACCGTCGGTTGTTGCACGTCGTCACC
AAGGGCTTCCACGAAGATCAGCGAGTCGGCCGTATCCGCTATTTCCCGCT
TTATCATGAGCAGCATCTGCCTGAGCCGCTCTCGCATGCCGTCGGCGACG
TTGTTGAGGTGCATGCTGGCGCATTGCAACAGTTCTTGGAGCCGCTCAAT
TCCTCCCAAGCTGCCTTGGTTCAGTGGAGCGACCGTATCTTTCCTTCGGA
GGACCACCTGTTCAGAGCCAATTCGACAATCACTGCCAACGCCTGTCACG
CTTATGGCGAACACAACAAGCCAAATACCACAATGTACATCTCTGCCAAG
AAGAGCATCGCCTTCGCGATAGGTGTTGTGCAGGTGATACGCTACGCCGG
TGGCGATGTAGATGCCGCTACTCAATTGCTCTCGAAGCATACTCGGTACG
TCTACAACGCCGCTATATGCCTTCGGAAGAGCGCTTCTGATTTGCCCATT
CCCAAGGTTGCGCTGGATCATCTCATTGAGCACTCCAAAGATATCTTGAG
CATAGCTTTAGATGATCTATACAACAAAAACCCAGGGCATTTCTTGCAGT
ACTACCAGTACCACTTGCCGGCTCCCACGGAGTTGGAGAATATTCAGTAC
ATATCTGCGCCGCCGTTACGCATGTTTGGAGGGCTTGTTGATCAATTTGC
TTCTATCTCGTCTGGTGGATTGGCCACGAGCTACCTTGACTTCGAAACCT
CGCATGGTACCAGTCTCACTGTTAGACTTACAGAGGATCTGTTGTGCTCT
ACCAATCCGTACGACTATCTCGCAGTTTGA
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protein sequence of Ggra10119.t1

>Ggra10119.t1 ID=Ggra10119.t1|Name=Ggra10119.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=360bp
MTLRTIALLVIALSSCLHPLRASECAPSTSRADFVRRAYDANLQFIRKGV
PAIAVDSFFRHAITNVIHKCSCNITSLNTLCARLDFDANHTDRRLLHVVT
KGFHEDQRVGRIRYFPLYHEQHLPEPLSHAVGDVVEVHAGALQQFLEPLN
SSQAALVQWSDRIFPSEDHLFRANSTITANACHAYGEHNKPNTTMYISAK
KSIAFAIGVVQVIRYAGGDVDAATQLLSKHTRYVYNAAICLRKSASDLPI
PKVALDHLIEHSKDILSIALDDLYNKNPGHFLQYYQYHLPAPTELENIQY
ISAPPLRMFGGLVDQFASISSGGLATSYLDFETSHGTSLTVRLTEDLLCS
TNPYDYLAV*
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mRNA from alignment at tig00000113_pilon:230166..231245-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10119.t1 ID=Ggra10119.t1|Name=Ggra10119.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1080bp|location=Sequence derived from alignment at tig00000113_pilon:230166..231245- (Gracilaria gracilis GNS1m male)
ATGACCCTCCGCACCATCGCGTTGCTTGTGATCGCCCTATCGTCCTGTCT
CCACCCACTGCGCGCGTCGGAATGCGCGCCCTCGACTTCCCGTGCAGACT
TTGTGCGCCGCGCGTACGACGCCAACCTGCAGTTCATTCGAAAGGGTGTG
CCAGCCATTGCCGTTGACTCGTTCTTCCGCCACGCTATTACCAACGTCAT
TCATAAGTGCTCTTGCAATATCACCTCGCTCAATACACTGTGTGCGCGGT
TGGACTTCGATGCCAATCACACTGACCGTCGGTTGTTGCACGTCGTCACC
AAGGGCTTCCACGAAGATCAGCGAGTCGGCCGTATCCGCTATTTCCCGCT
TTATCATGAGCAGCATCTGCCTGAGCCGCTCTCGCATGCCGTCGGCGACG
TTGTTGAGGTGCATGCTGGCGCATTGCAACAGTTCTTGGAGCCGCTCAAT
TCCTCCCAAGCTGCCTTGGTTCAGTGGAGCGACCGTATCTTTCCTTCGGA
GGACCACCTGTTCAGAGCCAATTCGACAATCACTGCCAACGCCTGTCACG
CTTATGGCGAACACAACAAGCCAAATACCACAATGTACATCTCTGCCAAG
AAGAGCATCGCCTTCGCGATAGGTGTTGTGCAGGTGATACGCTACGCCGG
TGGCGATGTAGATGCCGCTACTCAATTGCTCTCGAAGCATACTCGGTACG
TCTACAACGCCGCTATATGCCTTCGGAAGAGCGCTTCTGATTTGCCCATT
CCCAAGGTTGCGCTGGATCATCTCATTGAGCACTCCAAAGATATCTTGAG
CATAGCTTTAGATGATCTATACAACAAAAACCCAGGGCATTTCTTGCAGT
ACTACCAGTACCACTTGCCGGCTCCCACGGAGTTGGAGAATATTCAGTAC
ATATCTGCGCCGCCGTTACGCATGTTTGGAGGGCTTGTTGATCAATTTGC
TTCTATCTCGTCTGGTGGATTGGCCACGAGCTACCTTGACTTCGAAACCT
CGCATGGTACCAGTCTCACTGTTAGACTTACAGAGGATCTGTTGTGCTCT
ACCAATCCGTACGACTATCTCGCAGTTTGA
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Coding sequence (CDS) from alignment at tig00000113_pilon:230166..231245-

>Ggra10119.t1 ID=Ggra10119.t1|Name=Ggra10119.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1080bp|location=Sequence derived from alignment at tig00000113_pilon:230166..231245- (Gracilaria gracilis GNS1m male)
ATGACCCTCCGCACCATCGCGTTGCTTGTGATCGCCCTATCGTCCTGTCT
CCACCCACTGCGCGCGTCGGAATGCGCGCCCTCGACTTCCCGTGCAGACT
TTGTGCGCCGCGCGTACGACGCCAACCTGCAGTTCATTCGAAAGGGTGTG
CCAGCCATTGCCGTTGACTCGTTCTTCCGCCACGCTATTACCAACGTCAT
TCATAAGTGCTCTTGCAATATCACCTCGCTCAATACACTGTGTGCGCGGT
TGGACTTCGATGCCAATCACACTGACCGTCGGTTGTTGCACGTCGTCACC
AAGGGCTTCCACGAAGATCAGCGAGTCGGCCGTATCCGCTATTTCCCGCT
TTATCATGAGCAGCATCTGCCTGAGCCGCTCTCGCATGCCGTCGGCGACG
TTGTTGAGGTGCATGCTGGCGCATTGCAACAGTTCTTGGAGCCGCTCAAT
TCCTCCCAAGCTGCCTTGGTTCAGTGGAGCGACCGTATCTTTCCTTCGGA
GGACCACCTGTTCAGAGCCAATTCGACAATCACTGCCAACGCCTGTCACG
CTTATGGCGAACACAACAAGCCAAATACCACAATGTACATCTCTGCCAAG
AAGAGCATCGCCTTCGCGATAGGTGTTGTGCAGGTGATACGCTACGCCGG
TGGCGATGTAGATGCCGCTACTCAATTGCTCTCGAAGCATACTCGGTACG
TCTACAACGCCGCTATATGCCTTCGGAAGAGCGCTTCTGATTTGCCCATT
CCCAAGGTTGCGCTGGATCATCTCATTGAGCACTCCAAAGATATCTTGAG
CATAGCTTTAGATGATCTATACAACAAAAACCCAGGGCATTTCTTGCAGT
ACTACCAGTACCACTTGCCGGCTCCCACGGAGTTGGAGAATATTCAGTAC
ATATCTGCGCCGCCGTTACGCATGTTTGGAGGGCTTGTTGATCAATTTGC
TTCTATCTCGTCTGGTGGATTGGCCACGAGCTACCTTGACTTCGAAACCT
CGCATGGTACCAGTCTCACTGTTAGACTTACAGAGGATCTGTTGTGCTCT
ACCAATCCGTACGACTATCTCGCAGTTTGA
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