Ggra10030.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10030.t1
Unique NameGgra10030.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length323
Homology
BLAST of Ggra10030.t1 vs. uniprot
Match: A0A2V3IH85 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH85_9FLOR)

HSP 1 Score: 174 bits (441), Expect = 1.490e-48
Identity = 109/321 (33.96%), Postives = 170/321 (52.96%), Query Frame = 0
Query:    1 MSWSVFCIMLTFSSVV----FVNAQSTEAGACIMTDTSCPCAEILVSGDCITHNGNNKCSKGACKPSYRCDCLGYEMCKRTQCAMYSSEGNVIPGAKDSFPCHPGPSTAVCTSFDYVMDTVAAVENMYTAIIGANDESSAMMMEAYEIVAQIEADIIAVNDALKNIAVLRSRMTAPEKHDIETEAEAVISIVADSGELALNASHEAEKVYRASRQLAELRQEIRKASNSEKTAEQALLTAQQNANDSGESCKQCASLKHELEKNQKTHKEAILKAADISKTSREHNWNAGKLRDQVLENRSRAVEGKRKLLSLIDGINKRV 317
            + WS F I+L  + +V     V++Q+++   C+  + SCPC+++  SG C+    +  C  G C+P YRCDCLGY MCKR++CAMY++  N IP     F CH  P    CT+FD+V+DTV + EN     I A++ ++    ++ E+   I+AD+ AV+D LK I   R  ++  E  DIE + + V+   A++   A   S +A KV++     AE ++E R+A    K AEQ L   +               LK   EK+ K  KE   KA + +K  R  + +    RD+V +N  +A+E K +L    DG  K++
Sbjct:    3 LDWSSFRIILLATGLVNILVLVHSQASQGVGCVFKEDSCPCSQMEPSGVCMKPGSDGLCLLGKCQPGYRCDCLGYAMCKRSKCAMYTAVENAIPSESIPFRCHLTPDAGRCTTFDHVLDTVESAENAAVDSIHASEAATTYTAQSLEMAVMIQADVAAVSDTLKAIEPFRDGLSNEEIADIEQDTQIVVESAAEAAREASEVSKDAAKVFKNRLLAAEFKKEARQADMEAKHAEQKLKENKXXXXXXXXXXXXXNELKAASEKHTKNRKEWCSKAGEAAKLGRSGSMDCAAGRDRVNQNLVKALEAKDRL----DGTAKKL 319          
BLAST of Ggra10030.t1 vs. uniprot
Match: A0A2V3ISV1 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISV1_9FLOR)

HSP 1 Score: 174 bits (440), Expect = 2.510e-48
Identity = 101/305 (33.11%), Postives = 162/305 (53.11%), Query Frame = 0
Query:   11 TFSSVVFVNAQSTEAGACIMTDTSCPCAEILVSGDCITHNGNNKCSKGACKPSYRCDCLGYEMCKRTQCAMYSSEGNVIPGAKDSFPCHPGPSTAVCTSFDYVMDTVAAVENMYTAIIGANDESSAMMMEAYEIVAQIEADIIAVNDALKNIAVLRSRMTAPEKHDIETEAEAVISIVADSGELALNASHEAEKVYRASRQLAELRQEIRKASNSEKTAEQALLTAQQNANDSGESCKQCASLKHELEKNQKTHKEAILKAADISKTSREHNWNAGKLRDQVLENRSRAVEGKRKLLSLIDGINK 315
            T + V FV AQ+T+   C+ +D SCPC+++  SG C+  +    C  G C   YRCDCLGY MCKRT+CAMY++  NVIP     F CH  P    CT+FD+++DT+ A EN       +ND +SA   E+Y++VA+ ++D+ AVN+AL++I   R  ++  E  ++E +AE V     ++   AL  S +A +V +  R +A+L++   K     K A+                                  KE+  KA + +K +RE   N+ + R +V+ N S++ E K ++ S ++ ++K
Sbjct:   18 TLNLVHFVQAQATQGVGCVFSDDSCPCSQMEPSGVCMKPDNEGMCLLGECNTGYRCDCLGYTMCKRTKCAMYTAVENVIPSESVPFGCHLTPDAGQCTAFDHMLDTLDAAENALVEASHSNDAASAYTAESYQLVAKAQSDVSAVNEALRSIEPFRDELSDEETDELEKDAEVVRQSATEAAREALQVSLKAAEVNKERRLVADLKKTASKRDKEAKRAKDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKESCSKAGEAAKRAREGRSNSNEGRKRVMGNCSKSAEAKARIESRVENMDK 322          
BLAST of Ggra10030.t1 vs. uniprot
Match: A0A2V3IN05 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN05_9FLOR)

HSP 1 Score: 169 bits (428), Expect = 1.830e-47
Identity = 94/249 (37.75%), Postives = 148/249 (59.44%), Query Frame = 0
Query:   69 LGYEMCKRTQCAMYSSEGNVIPGAKDSFPCHPGPSTAVCTSFDYVMDTVAAVENMYTAIIGANDESSAMMMEAYEIVAQIEADIIAVNDALKNIAVLRSRMTAPEKHDIETEAEAVISIVADSGELALNASHEAEKVYRASRQLAELRQEIRKASNSEKTAEQALLTAQQNANDSGESCKQCASLKHELEKNQKTHKEAILKAADISKTSREHNWNAGKLRDQVLENRSRAVEGKRKLLSLIDGINKRV 317
            +GYEMC R++CA+Y+++ N +P     F CH       CT FDYVM +V AV+NM T +    D      +E YE+VA IEAD+I  NDALK++  +R+ M+A E   IE + + VI  V ++G LAL AS +  KVY+ SR LA L  + RKA+   + AE+ L + +  A   G  C  C  L+ ++E+ +   K A++ A  ++K +RE + NA   R+++ E RS++ E + K++  ++ + +RV
Sbjct:    1 MGYEMCTRSRCALYTAKENALPSETTPFGCHLTIDAGTCTRFDYVMHSVTAVDNMQTEVNSVTDAILNENLEVYEMVAAIEADVIVTNDALKSMDQMRNEMSAQEIEKIEKDGDLVIDAVEEAGRLALAASQDGRKVYKGSRNLARLAAKARKANRDAEVAEKRLKSEETRAEKDGTECTTCPGLRDDVERLKSEGKNAVIAAGQVAKQAREDSRNARDNRNKIKELRSQSDERRGKVVEAVEEVKRRV 249          
BLAST of Ggra10030.t1 vs. uniprot
Match: A0A2V3IHC7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHC7_9FLOR)

HSP 1 Score: 150 bits (379), Expect = 2.510e-39
Identity = 91/302 (30.13%), Postives = 151/302 (50.00%), Query Frame = 0
Query:   14 SVVFVNAQSTEAGACIMTDTSCPCAEILVSGDCITHNGNNKCSKGACKPSYRCDCLGYEMCKRTQCAMYSSEGNVIPGAKDSFPCHPGPSTAVCTSFDYVMDTVAAVENMYTAIIGANDESSAMMMEAYEIVAQIEADIIAVNDALKNIAVLRSRMTAPEKHDIETEAEAVISIVADSGELALNASHEAEKVYRASRQLAELRQEIRKASNSEKTAEQALLTAQQNANDSGESCKQCASLKHELEKNQKTHKEAILKAADISKTSREHNWNAGKLRDQVLENRSRAVEGKRKLLSLIDGINK 315
            S+ FV AQ+T+   C+ +D SCPC++   SG C+       C  G C+  YRCDCLGY MC+R++CAM+++  N IP     F CH  P    CT+F ++MDT+ A +N       +ND +S+   EAY +V + +ADI  V+ ALK+I   R  ++  E   IE                         +V +  R +A+ +++  K                       ++C++C +LK E EK   + K++ +KA + ++ +R    NA +  ++V +N S++ E K ++ S I+ I +
Sbjct:   21 SIRFVIAQATQGVQCVFSDDSCPCSQTGPSGVCMKPQTEGLCLLGKCEVGYRCDCLGYAMCERSKCAMFTAMENAIPSEDIPFGCHLTPDAGQCTTFAHIMDTLEAADNALVEASHSNDLASSYTSEAYHMVIKAQADISTVDAALKSIEPFRDELSDEETDAIEKXXXXXXXXXXXXXXXXXXXXXXXAEVNKERRVVADFKKKANKCDKEAXXXXXXXXXXXXXXXXEQKTCEECGALKEENEKQTDSRKDSCVKAGEAAQRARNGRSNANEGNNRVKQNCSKSAEAKARIESKIERIGQ 322          
BLAST of Ggra10030.t1 vs. uniprot
Match: A0A2V3IKB4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKB4_9FLOR)

HSP 1 Score: 91.7 bits (226), Expect = 2.300e-18
Identity = 66/203 (32.51%), Postives = 113/203 (55.67%), Query Frame = 0
Query:  114 MDTVAAVENMYTAIIGANDESSAMMMEAYEIVAQIEADIIAVNDALKNIAVLRSRMTAPEKHDIETEAEAVISIVADSGELALNASHEAEKVYRASRQLAELRQEIRKASNSEKTAEQALLTAQQNANDSGESCKQCASLKHELEKNQKTHKEAILKAADISKTSREHNWNAGKLRDQVLENRSRAVEGKRKLLSLIDGINKR 316
            MD++ +VEN   A    +       MEAY++VA IE+D IAVNDALK+I    + ++  E+  +E +A  V+ ++ +SG  A + S  A  VY+ SRQ+++LR    ++      A Q L   Q+ A+     C  CA L+ ++++ +K  K+A   A + ++ +REHN  A +   ++ E RS + E K ++L+ +  + KR
Sbjct:    1 MDSIDSVENALDADTIQHRAVMLKRMEAYKMVAAIESDGIAVNDALKSIEHQWNVVSPEEREQLEKDAVMVMELLLESGRGAFDVSVMANTVYKGSRQVSQLRAAAIQSHERLNQATQKLEEEQEKADGKNSPCTACAQLQGDVKEFKKEVKDASKLAGEAARGNREHNHKAIEDMKKIEEQRSMSAEAKERVLAKVSSVLKR 203          
The following BLAST results are available for this feature:
BLAST of Ggra10030.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IH851.490e-4833.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISV12.510e-4833.11Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IN051.830e-4737.75Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IHC72.510e-3930.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKB42.300e-1832.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 205..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000222_piloncontigtig00000222_pilon:100422..101390 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10030.t1Ggra10030.t1Gracilaria gracilis GNS1m malemRNAtig00000222_pilon 100422..101390 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10030.t1 ID=Ggra10030.t1|Name=Ggra10030.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=323bp
MSWSVFCIMLTFSSVVFVNAQSTEAGACIMTDTSCPCAEILVSGDCITHN
GNNKCSKGACKPSYRCDCLGYEMCKRTQCAMYSSEGNVIPGAKDSFPCHP
GPSTAVCTSFDYVMDTVAAVENMYTAIIGANDESSAMMMEAYEIVAQIEA
DIIAVNDALKNIAVLRSRMTAPEKHDIETEAEAVISIVADSGELALNASH
EAEKVYRASRQLAELRQEIRKASNSEKTAEQALLTAQQNANDSGESCKQC
ASLKHELEKNQKTHKEAILKAADISKTSREHNWNAGKLRDQVLENRSRAV
EGKRKLLSLIDGINKRVIDVDI*
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