Ggra10028.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10028.t1
Unique NameGgra10028.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length273
Homology
BLAST of Ggra10028.t1 vs. uniprot
Match: A0A2V3IH85 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH85_9FLOR)

HSP 1 Score: 129 bits (325), Expect = 4.480e-32
Identity = 90/254 (35.43%), Postives = 134/254 (52.76%), Query Frame = 0
Query:    1 MGACKPSYRCDCMGYEMCNRSQCAIYTADGSVDNN--TQSTPFECHLTAGAAICTDYHHVIDTLEAVGYAAAQVDEVHGS--AIRLLGDSSSTMHGIEDDAAEVDDALRSIEPYLANLTAQETHGIELEAEIVSQSLAEALRLQQASSEMHLKLHDVSVQVEGNGTVALQAASEVANLEQQLQQARGQSKSEARACTECSALQASIEMHTRVRQEAASRGGHDARNTRADAADIGQYAFLVHENRARSIAAKTR 250
            +G C+P YRCDC+GY MC RS+CA+YTA   V+N   ++S PF CHLT  A  CT + HV+DT+E+   AA  VD +H S  A      S      I+ D A V D L++IEP+   L+ +E   IE + +IV +S AEA R     S+   K+    +        A QA  E  + EQ+L++ +             + L+A+ E HT+ R+E  S+ G  A+  R+ + D       V++N  +++ AK R
Sbjct:   63 LGKCQPGYRCDCLGYAMCKRSKCAMYTA---VENAIPSESIPFRCHLTPDAGRCTTFDHVLDTVESAENAA--VDSIHASEAATTYTAQSLEMAVMIQADVAAVSDTLKAIEPFRDGLSNEEIADIEQDTQIVVESAAEAAREASEVSKDAAKVFKNRLLAAEFKKEARQADMEAKHAEQKLKENKXXXXXXXXXXXXXNELKAASEKHTKNRKEWCSKAGEAAKLGRSGSMDCAAGRDRVNQNLVKALEAKDR 311          
BLAST of Ggra10028.t1 vs. uniprot
Match: A0A2V3ISV1 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISV1_9FLOR)

HSP 1 Score: 112 bits (279), Expect = 2.370e-25
Identity = 57/138 (41.30%), Postives = 84/138 (60.87%), Query Frame = 0
Query:    1 MGACKPSYRCDCMGYEMCNRSQCAIYTADGSVDNNTQSTPFECHLTAGAAICTDYHHVIDTLEAVGYAAAQVDEVHGSAIRLLGDSSSTMHGIEDDAAEVDDALRSIEPYLANLTAQETHGIELEAEIVSQSLAEALR 138
            +G C   YRCDC+GY MC R++CA+YTA  +V  + +S PF CHLT  A  CT + H++DTL+A   A  +    + +A     +S   +   + D + V++ALRSIEP+   L+ +ET  +E +AE+V QS  EA R
Sbjct:   64 LGECNTGYRCDCLGYTMCKRTKCAMYTAVENVIPS-ESVPFGCHLTPDAGQCTAFDHMLDTLDAAENALVEASHSNDAASAYTAESYQLVAKAQSDVSAVNEALRSIEPFRDELSDEETDELEKDAEVVRQSATEAAR 200          
BLAST of Ggra10028.t1 vs. uniprot
Match: A0A2V3IN05 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN05_9FLOR)

HSP 1 Score: 95.9 bits (237), Expect = 6.150e-20
Identity = 69/243 (28.40%), Postives = 123/243 (50.62%), Query Frame = 0
Query:   13 MGYEMCNRSQCAIYTADGSVDNNTQSTPFECHLTAGAAICTDYHHVIDTLEAVGYAAAQVDEVHGSAIRLLGDSSSTMHGIEDDAAEVDDALRSIEPYLANLTAQETHGIELEAEIVSQSLAEALRLQQASSEMHLKLHDVSVQVEGNGTVALQAASEVANLEQQLQQARGQSKSEARACTECSALQASIEMHTRVRQEAASRGGHDARNTRADAADIGQYAFLVHENRARSIAAKTRVLEMV 255
            MGYEMC RS+CA+YTA  +    +++TPF CHLT  A  CT + +V+ ++ AV     +V+ V  + +    +    +  IE D    +DAL+S++     ++AQE   IE + ++V  ++ EA RL  A+S+   K++  S  +      A +A  +    E++L+    +++ +   CT C  L+  +E      + A    G  A+  R D+ +       + E R++S   + +V+E V
Sbjct:    1 MGYEMCTRSRCALYTAKENA-LPSETTPFGCHLTIDAGTCTRFDYVMHSVTAVDNMQTEVNSVTDAILNENLEVYEMVAAIEADVIVTNDALKSMDQMRNEMSAQEIEKIEKDGDLVIDAVEEAGRLALAASQDGRKVYKGSRNLARLAAKARKANRDAEVAEKRLKSEETRAEKDGTECTTCPGLRDDVERLKSEGKNAVIAAGQVAKQAREDSRNARDNRNKIKELRSQSDERRGKVVEAV 242          
BLAST of Ggra10028.t1 vs. uniprot
Match: A0A2V3IHC7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHC7_9FLOR)

HSP 1 Score: 95.9 bits (237), Expect = 2.200e-19
Identity = 69/252 (27.38%), Postives = 112/252 (44.44%), Query Frame = 0
Query:    1 MGACKPSYRCDCMGYEMCNRSQCAIYTA-DGSVDNNTQSTPFECHLTAGAAICTDYHHVIDTLEAVGYAAAQVDEVHGSAIRLLGDSSSTMHGIEDDAAEVDDALRSIEPYLANLTAQETHGIELEAEIVSQSLAEALRLQQASSEMHLKLHDVSVQVEGNGTVALQAASEVANLEQQLQQARGQSKSEARACTECSALQASIEMHTRVRQEAASRGGHDARNTRADAADIGQYAFLVHENRARSIAAKTRV 251
            +G C+  YRCDC+GY MC RS+CA++TA + ++ +  +  PF CHLT  A  CT + H++DTLEA   A  +    +  A     ++   +   + D + VD AL+SIEP+   L+ +ET  IE                         +++     V      A +   E                 E + C EC AL+   E  T  R+++  + G  A+  R   ++  +    V +N ++S  AK R+
Sbjct:   64 LGKCEVGYRCDCLGYAMCERSKCAMFTAMENAIPS--EDIPFGCHLTPDAGQCTTFAHIMDTLEAADNALVEASHSNDLASSYTSEAYHMVIKAQADISTVDAALKSIEPFRDELSDEETDAIEKXXXXXXXXXXXXXXXXXXXXXXXAEVNKERRVVADFKKKANKCDKEAXXXXXXXXXXXXXXXXEQKTCEECGALKEENEKQTDSRKDSCVKAGEAAQRARNGRSNANEGNNRVKQNCSKSAEAKARI 313          
The following BLAST results are available for this feature:
BLAST of Ggra10028.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IH854.480e-3235.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISV12.370e-2541.30Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IN056.150e-2028.40Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IHC72.200e-1927.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 164..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000222_piloncontigtig00000222_pilon:97011..97829 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10028.t1Ggra10028.t1Gracilaria gracilis GNS1m malemRNAtig00000222_pilon 97011..97829 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10028.t1 ID=Ggra10028.t1|Name=Ggra10028.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=273bp
MGACKPSYRCDCMGYEMCNRSQCAIYTADGSVDNNTQSTPFECHLTAGAA
ICTDYHHVIDTLEAVGYAAAQVDEVHGSAIRLLGDSSSTMHGIEDDAAEV
DDALRSIEPYLANLTAQETHGIELEAEIVSQSLAEALRLQQASSEMHLKL
HDVSVQVEGNGTVALQAASEVANLEQQLQQARGQSKSEARACTECSALQA
SIEMHTRVRQEAASRGGHDARNTRADAADIGQYAFLVHENRARSIAAKTR
VLEMVTVIVTRMSTSQIGVSHD*
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