Ggra10024.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10024.t1
Unique NameGgra10024.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length155
Homology
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BLAST of Ggra10024.t1 vs. uniprot
Match: A0A2V3IK70 (Nucleoside diphosphate kinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK70_9FLOR)

HSP 1 Score: 301 bits (770), Expect = 2.790e-103
Identity = 145/154 (94.16%), Postives = 152/154 (98.70%), Query Frame = 0 
Query:    1 MADKSERSYIMLKPDAVQRGLVGEVIQRFEKRGFKLVALKLVTPTLDMAKKHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSWSKTDIEAWVYE 154
            MAD +ERSYIMLKPDAVQRGLVGE++QRFEKRGFKLVALKLVTP+L+MA+KHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSW KTD+EAWVYE
Sbjct:    1 MADSTERSYIMLKPDAVQRGLVGEIVQRFEKRGFKLVALKLVTPSLEMAQKHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSWKKTDVEAWVYE 154
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BLAST of Ggra10024.t1 vs. uniprot
Match: A0A2Z7BDK9 (Nucleoside diphosphate kinase n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BDK9_9LAMI)

HSP 1 Score: 209 bits (532), Expect = 3.220e-66
Identity = 95/152 (62.50%), Postives = 126/152 (82.89%), Query Frame = 0 
Query:    2 ADKSERSYIMLKPDAVQRGLVGEVIQRFEKRGFKLVALKLVTPTLDMAKKHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSWSKTDIEAWVY 153
            A + ER++I +KPD VQRGL+ E+I RFE++GFKLV +K++ P+ D AKKHY+DLAERPFF  LC FLSSGPV+AMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI+LWFKPEEL S++ ++ E W+Y
Sbjct:   57 AAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAKKHYHDLAERPFFDGLCDFLSSGPVIAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEISLWFKPEELVSYA-SNAEKWIY 207
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BLAST of Ggra10024.t1 vs. uniprot
Match: A0A4Y7J9U8 (Nucleoside diphosphate kinase n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7J9U8_PAPSO)

HSP 1 Score: 207 bits (528), Expect = 3.580e-66
Identity = 96/152 (63.16%), Postives = 125/152 (82.24%), Query Frame = 0 
Query:    2 ADKSERSYIMLKPDAVQRGLVGEVIQRFEKRGFKLVALKLVTPTLDMAKKHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSWSKTDIEAWVY 153
            A + ER++I +KPD VQRGL+ E++ RFE++GFKLVA+KLV P+ D A+KHY+DL ERPFF  LC FLSSGPV+AMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI LWFKPEELN+++  + E WVY
Sbjct:   17 AAEMERTFIAIKPDGVQRGLISEIVARFERKGFKLVAIKLVVPSKDFAQKHYHDLKERPFFNGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELNTYT-INSEKWVY 167
[Close]
BLAST of Ggra10024.t1 vs. uniprot
Match: A0A059C258 (Nucleoside diphosphate kinase n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059C258_EUCGR)

HSP 1 Score: 208 bits (530), Expect = 7.140e-66
Identity = 97/152 (63.82%), Postives = 125/152 (82.24%), Query Frame = 0 
Query:    2 ADKSERSYIMLKPDAVQRGLVGEVIQRFEKRGFKLVALKLVTPTLDMAKKHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSWSKTDIEAWVY 153
            A + ERS+I +KPD VQRGL+ E+I RFE++GFKLVA+K+V PT D A+KHY+DL ERPFF  LC FLSSGPVVAMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI+LWFKPEEL +++  + E W+Y
Sbjct:   60 AAELERSFIAIKPDGVQRGLISEIISRFERKGFKLVAIKVVVPTKDFAQKHYHDLKERPFFNGLCDFLSSGPVVAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEISLWFKPEELVNYTN-NAEKWIY 210
[Close]
BLAST of Ggra10024.t1 vs. uniprot
Match: nucleoside diphosphate kinase 3-like n=1 Tax=Nymphaea colorata TaxID=210225 RepID=UPI00129E3E5F (nucleoside diphosphate kinase 3-like n=1 Tax=Nymphaea colorata TaxID=210225 RepID=UPI00129E3E5F)

HSP 1 Score: 209 bits (531), Expect = 1.080e-65
Identity = 98/152 (64.47%), Postives = 126/152 (82.89%), Query Frame = 0 
Query:    2 ADKSERSYIMLKPDAVQRGLVGEVIQRFEKRGFKLVALKLVTPTLDMAKKHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSWSKTDIEAWVY 153
            A + ER++I +KPD VQRGLV E+I RFE++G+KLVA+KLV PT D A+KHY+DL ERPFF  LC FLSSGPV+AMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI+LWFKPEEL S++ ++ E WVY
Sbjct:   84 AAEMERTFIAIKPDGVQRGLVAEIIDRFERKGYKLVAIKLVIPTKDFAEKHYHDLKERPFFNGLCNFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEISLWFKPEELVSYT-SNAEKWVY 234
[Close]
BLAST of Ggra10024.t1 vs. uniprot
Match: A0A175YEY8 (Nucleoside diphosphate kinase n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YEY8_DAUCS)

HSP 1 Score: 208 bits (529), Expect = 1.080e-65
Identity = 96/152 (63.16%), Postives = 123/152 (80.92%), Query Frame = 0 
Query:    2 ADKSERSYIMLKPDAVQRGLVGEVIQRFEKRGFKLVALKLVTPTLDMAKKHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSWSKTDIEAWVY 153
            A + ER++I +KPD VQRGL+ E+I RFE++GFKLVA+K+  P+ D AKKHY+DL ERPFF  LC FLSSGPV+AMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI LWFKPEEL S++  + E WVY
Sbjct:   62 AAQMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKITVPSKDFAKKHYHDLKERPFFDGLCDFLSSGPVIAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAQDEIKLWFKPEELTSYA-INSEKWVY 212
[Close]
BLAST of Ggra10024.t1 vs. uniprot
Match: A0A059C2N4 (Nucleoside diphosphate kinase n=2 Tax=Myrtoideae TaxID=1699513 RepID=A0A059C2N4_EUCGR)

HSP 1 Score: 208 bits (530), Expect = 1.530e-65
Identity = 97/152 (63.82%), Postives = 125/152 (82.24%), Query Frame = 0 
Query:    2 ADKSERSYIMLKPDAVQRGLVGEVIQRFEKRGFKLVALKLVTPTLDMAKKHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSWSKTDIEAWVY 153
            A + ERS+I +KPD VQRGL+ E+I RFE++GFKLVA+K+V PT D A+KHY+DL ERPFF  LC FLSSGPVVAMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI+LWFKPEEL +++  + E W+Y
Sbjct:   84 AAELERSFIAIKPDGVQRGLISEIISRFERKGFKLVAIKVVVPTKDFAQKHYHDLKERPFFNGLCDFLSSGPVVAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEISLWFKPEELVNYTN-NAEKWIY 234
[Close]
BLAST of Ggra10024.t1 vs. uniprot
Match: A0A2G9I2Q9 (Nucleoside diphosphate kinase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9I2Q9_9LAMI)

HSP 1 Score: 206 bits (523), Expect = 1.590e-65
Identity = 94/152 (61.84%), Postives = 125/152 (82.24%), Query Frame = 0 
Query:    2 ADKSERSYIMLKPDAVQRGLVGEVIQRFEKRGFKLVALKLVTPTLDMAKKHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSWSKTDIEAWVY 153
            A + ER++I +KPD VQRGL+ E+I RFE++GFKLVA+K+V P+ D AKKHY+DL+ERPFF  LC FLSSGPV+AMV+EGE VI+ G ++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI LWFKPEEL +++ ++ E W+Y
Sbjct:    9 AAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKDFAKKHYHDLSERPFFNGLCDFLSSGPVIAMVWEGEGVIKYGHKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEINLWFKPEELVTYT-SNAEKWIY 159
[Close]
BLAST of Ggra10024.t1 vs. uniprot
Match: A0A7N0TPP6 (Nucleoside diphosphate kinase n=3 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TPP6_KALFE)

HSP 1 Score: 208 bits (530), Expect = 1.630e-65
Identity = 97/152 (63.82%), Postives = 125/152 (82.24%), Query Frame = 0 
Query:    2 ADKSERSYIMLKPDAVQRGLVGEVIQRFEKRGFKLVALKLVTPTLDMAKKHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSWSKTDIEAWVY 153
            A + ER++I +KPD VQRGL+ E++ RFE++GFKLVA+KLV P+ D A+KHY+DL ERPFF  LC FLSSGPV+AMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+AE EI LWFKPEEL S++ ++ E WVY
Sbjct:   86 AAEMERTFIAIKPDGVQRGLIAEIVSRFERKGFKLVAIKLVVPSKDFAQKHYHDLKERPFFSGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAEDEINLWFKPEELVSYT-SNAEKWVY 236
[Close]
BLAST of Ggra10024.t1 vs. uniprot
Match: nucleoside diphosphate kinase IV, chloroplastic/mitochondrial-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C75DB (nucleoside diphosphate kinase IV, chloroplastic/mitochondrial-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C75DB)

HSP 1 Score: 208 bits (529), Expect = 2.170e-65
Identity = 95/153 (62.09%), Postives = 126/153 (82.35%), Query Frame = 0 
Query:    2 ADKSERSYIMLKPDAVQRGLVGEVIQRFEKRGFKLVALKLVTPTLDMAKKHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSWSKTDIEAWVYE 154
            A + ER++I +KPD VQRGL+ E++ RFE++GFKLV +K++ P+ D A+KHY+DL ERPFF  LC+FLSSGPVVAMV+EGE VIR GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI LWFKPEEL S++ ++ E W+YE
Sbjct:   84 AAEMERTFIAIKPDGVQRGLISEIVSRFERKGFKLVGIKILVPSKDFAQKHYHDLKERPFFNGLCEFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVSYT-SNAEKWIYE 235
The following BLAST results are available for this feature:
BLAST of Ggra10024.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK702.790e-10394.16Nucleoside diphosphate kinase n=1 Tax=Gracilariops... [more]
A0A2Z7BDK93.220e-6662.50Nucleoside diphosphate kinase n=1 Tax=Dorcoceras h... [more]
A0A4Y7J9U83.580e-6663.16Nucleoside diphosphate kinase n=2 Tax=Papaver somn... [more]
A0A059C2587.140e-6663.82Nucleoside diphosphate kinase n=2 Tax=Eucalyptus g... [more]
nucleoside diphosphate kinase 3-like n=1 Tax=Nymphaea colorata TaxID=210225 RepID=UPI00129E3E5F1.080e-6564.47nucleoside diphosphate kinase 3-like n=1 Tax=Nymph... [more]
A0A175YEY81.080e-6563.16Nucleoside diphosphate kinase n=2 Tax=Daucus carot... [more]
A0A059C2N41.530e-6563.82Nucleoside diphosphate kinase n=2 Tax=Myrtoideae T... [more]
A0A2G9I2Q91.590e-6561.84Nucleoside diphosphate kinase n=1 Tax=Handroanthus... [more]
A0A7N0TPP61.630e-6563.82Nucleoside diphosphate kinase n=3 Tax=Kalanchoe fe... [more]
nucleoside diphosphate kinase IV, chloroplastic/mitochondrial-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C75DB2.170e-6562.09nucleoside diphosphate kinase IV, chloroplastic/mi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001564Nucleoside diphosphate kinasePRINTSPR01243NUCDPKINASEcoord: 8..30
score: 61.22
coord: 52..71
score: 46.21
coord: 72..89
score: 59.5
coord: 93..109
score: 64.14
coord: 116..135
score: 72.42
IPR001564Nucleoside diphosphate kinaseHAMAPMF_00451NDP_kinasecoord: 5..140
score: 33.210255
IPR034907Nucleoside diphosphate kinase-like domainSMARTSM00562ndk_5coord: 5..142
e-value: 2.3E-80
score: 283.0
IPR034907Nucleoside diphosphate kinase-like domainPFAMPF00334NDKcoord: 6..139
e-value: 2.1E-52
score: 176.7
IPR036850Nucleoside diphosphate kinase-like domain superfamilyGENE3D3.30.70.141coord: 1..154
e-value: 2.8E-60
score: 204.6
IPR036850Nucleoside diphosphate kinase-like domain superfamilySUPERFAMILY54919Nucleoside diphosphate kinase, NDKcoord: 6..147
NoneNo IPR availablePANTHERPTHR11349:SF101NUCLEOSIDE DIPHOSPHATE KINASE, CYTOSOLICcoord: 2..154
NoneNo IPR availablePANTHERPTHR11349NUCLEOSIDE DIPHOSPHATE KINASEcoord: 2..154
NoneNo IPR availableCDDcd04413NDPk_Icoord: 6..135
e-value: 6.54283E-84
score: 240.448
IPR023005Nucleoside diphosphate kinase, active sitePROSITEPS00469NDP_KINASEScoord: 116..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000222_piloncontigtig00000222_pilon:85775..86395 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10024.t1Ggra10024.t1Gracilaria gracilis GNS1m malemRNAtig00000222_pilon 85775..86395 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10024.t1 ID=Ggra10024.t1|Name=Ggra10024.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=155bp
MADKSERSYIMLKPDAVQRGLVGEVIQRFEKRGFKLVALKLVTPTLDMAK
KHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAA
DPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSWSKTDIEA
WVYE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001564Nucleoside_diP_kinase
IPR034907NDK-like_dom
IPR036850NDK-like_dom_sf
IPR023005Nucleoside_diP_kinase_AS