Ggra1002.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1002.t1
Unique NameGgra1002.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length157
Homology
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BLAST of Ggra1002.t1 vs. uniprot
Match: A0A2V3IMG5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG5_9FLOR)

HSP 1 Score: 159 bits (402), Expect = 1.060e-46
Identity = 74/154 (48.05%), Postives = 105/154 (68.18%), Query Frame = 0 
Query:    3 DDCYRPMSGTTVSVYEKMFVLTINDGIPLQCAEAYLFVFRQADLTPMIVKYPKIDIQLSEFPGGSMSGADVTRYCETTQPKRKREMFPVTETKGKFVAAVKKMIPIMLKIRDFGCTTDANGFSVPVEGRAFGNADLEAVISYLYSVAYQYGFCI 156
            DDCYRP S   VSVY+KMF+LT+N+     C E YL V+R   +TPMI+K+P ++  L+    G  SG+DV  +C+  Q K+K  +FPVTETK +F AAVK M+P +  IRDFGCT    GF + V+GRA+ N D+  +++YL++VA++Y  C+
Sbjct:   43 DDCYRPRSSDYVSVYKKMFILTLNENPSPACPERYLVVYRNPKVTPMIIKHPYLEFPLN----GGASGSDVEEWCKKEQQKKKTVLFPVTETKKEFTAAVKAMLPRLKAIRDFGCTATKEGFIIQVQGRAYDNVDVADIMAYLHAVAFKYELCL 192
The following BLAST results are available for this feature:
BLAST of Ggra1002.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMG51.060e-4648.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:125460..125930 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1002.t1Ggra1002.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 125460..125930 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1002.t1 ID=Ggra1002.t1|Name=Ggra1002.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=157bp
MPDDCYRPMSGTTVSVYEKMFVLTINDGIPLQCAEAYLFVFRQADLTPMI
VKYPKIDIQLSEFPGGSMSGADVTRYCETTQPKRKREMFPVTETKGKFVA
AVKKMIPIMLKIRDFGCTTDANGFSVPVEGRAFGNADLEAVISYLYSVAY
QYGFCI*
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