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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005705950.1 |
| Preferred name | FUN12 |
| PFAMs | GTP_EFTU,GTP_EFTU_D2,IF-2 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K03243,ko:K12834 |
| KEGG Pathway | ko03013,ko03040,map03013,map03040 |
| KEGG Module | M00352 |
| GOs | GO:0000166,GO:0000462,GO:0001732,GO:0001882,GO:0001883,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010608,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0030684,GO:0030687,GO:0031323,GO:0031326,GO:0031369,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033290,GO:0034248,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0035770,GO:0036094,GO:0036464,GO:0042254,GO:0042255,GO:0042274,GO:0043021,GO:0043022,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0070993,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112 |
| Evalue | 2.23e-27 |
| EggNOG OGs | COG0532@1|root,KOG1144@2759|Eukaryota |
| Description | translation initiation factor activity |
| COG category | J |
| BRITE | ko00000,ko00001,ko00002,ko03012,ko03041 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5040.t1.stop1 | Ggra5040.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000069_pilon 273372..273374 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5040.t1.start1 | Ggra5040.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000069_pilon 278099..278101 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra5040.t1 ID=Ggra5040.t1|Name=Ggra5040.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=461bp MIRTLIMKPIYNQEQWLEFSTTFRKDGRMPMSREALRILLKSYYQHQIAA RVGSERNVLATDTFQQLFGSASWYPQAVVTIKDVDITFSSGPEAIAKEEP GPKADAEVEVLLEELGRAGDAPAAKKKSKKKKIKSAAKAEDDEDGTGEGV FEASEAEKPKKRVRKHLREWCTVQKKGKPKGTEEPGVDHFEEEVQATTKE RLHVPETEKAKEVPQPQPQPEVIPDAWDELPDTGEGKPKILDRIRRTNVK DAEAGGITQQIGVTYFPIDAAKKEATKLEAGKKLTYNVPSLFIIDTPKHE SFSNLRSRGSALCDIAILFSGLGVCVQAYFLGSLEALLDYLRSTKIPKEY ATILGFDVPVEKEAREVAEHVGVQIVTGDIVYHVFDQFTAYMEKVKKKRR EAVNDEMVFPVIERSTGARVQKEGRHRSWCGCDGGHPKSWNASSVETWSS MARRWTHSEH* back to topspliced messenger RNA >Ggra5040.t1 ID=Ggra5040.t1|Name=Ggra5040.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1383bp|location=Sequence derived from alignment at tig00000069_pilon:273372..278101- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGATTCGAACATTGATCATGAAACCAATATATAACCAAGAACAATGGTT GGAATTTTCGACCACGTTTCGCAAGGACGGGCGCATGCCAATGTCAAGGG AGGCTTTGAGAATATTGTTGAAATCATATTATCAACACCAAATCGCCGCA CGAGTTGGGTCGGAAAGAAATGTACTTGCTACCGATACATTCCAGCAGTT GTTTGGCTCCGCTTCATGGTACCCGCAGGCAGTAGTCACCATTAAAGACG TAGACATCACGTTTTCGTCAGGACCCGAAGCAATTGCGAAAGAAGAGCCA GGGCCAAAGGCAGATGCGGAAGTGGAAGTCTTGTTGGAGGAACTGGGAAG AGCGGGGGATGCACCTGCCGCCAAAAAGAAGTCCAAGAAGAAGAAGATAA AAAGTGCGGCAAAGGCAGAAGATGATGAGGATGGGACCGGGGAAGGTGTG TTTGAAGCCTCTGAAGCTGAGAAGCCTAAGAAGAGAGTTCGGAAGCACCT GAGAGAGTGGTGTACAGTACAAAAAAAAGGTAAGCCTAAAGGTACTGAGG AACCAGGAGTGGATCACTTTGAAGAAGAAGTCCAAGCGACTACGAAAGAG CGTCTTCACGTCCCTGAAACTGAGAAAGCGAAGGAGGTCCCTCAACCACA ACCGCAGCCTGAAGTGATTCCTGATGCTTGGGATGAACTACCTGACACGG GAGAAGGAAAGCCAAAGATCTTGGATCGAATTCGCCGTACCAACGTTAAA GACGCCGAAGCAGGAGGCATCACACAGCAGATTGGTGTTACATATTTCCC TATTGATGCTGCAAAGAAGGAAGCAACAAAACTAGAAGCCGGGAAGAAGC TCACGTACAACGTGCCGTCTCTGTTTATTATCGATACACCTAAACATGAG TCATTCAGCAATCTGCGTTCCCGGGGTTCTGCATTGTGTGATATTGCAAT CCTTTTCTCGGGACTTGGAGTGTGTGTACAGGCTTATTTTCTTGGTTCAC TTGAAGCGTTACTTGATTATCTTCGATCGACAAAGATTCCCAAAGAGTAT GCTACAATTCTTGGGTTTGATGTGCCTGTAGAGAAGGAGGCTCGCGAAGT GGCTGAACATGTTGGCGTACAAATCGTCACGGGGGACATTGTCTATCACG TTTTCGATCAGTTCACTGCTTACATGGAAAAGGTCAAGAAGAAGAGGCGT GAGGCTGTGAATGATGAAATGGTGTTCCCTGTGATTGAAAGATCTACCGG AGCACGTGTACAAAAAGAAGGACGCCATCGTAGTTGGTGTGGGTGTGATG GAGGGCATCCTAAGAGTTGGAACGCCTCTAGTGTTGAAACATGGAGCTCA ATGGCTAGACGTTGGACGCATAGTGAGCATTGA back to topprotein sequence of Ggra5040.t1 >Ggra5040.t1 ID=Ggra5040.t1|Name=Ggra5040.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=461bp
MIRTLIMKPIYNQEQWLEFSTTFRKDGRMPMSREALRILLKSYYQHQIAA RVGSERNVLATDTFQQLFGSASWYPQAVVTIKDVDITFSSGPEAIAKEEP GPKADAEVEVLLEELGRAGDAPAAKKKSKKKKIKSAAKAEDDEDGTGEGV FEASEAEKPKKRVRKHLREWCTVQKKGKPKGTEEPGVDHFEEEVQATTKE RLHVPETEKAKEVPQPQPQPEVIPDAWDELPDTGEGKPKILDRIRRTNVK DAEAGGITQQIGVTYFPIDAAKKEATKLEAGKKLTYNVPSLFIIDTPKHE SFSNLRSRGSALCDIAILFSGLGVCVQAYFLGSLEALLDYLRSTKIPKEY ATILGFDVPVEKEAREVAEHVGVQIVTGDIVYHVFDQFTAYMEKVKKKRR EAVNDEMVFPVIERSTGARVQKEGRHRSWCGCDGGHPKSWNASSVETWSS MARRWTHSEH* back to topmRNA from alignment at tig00000069_pilon:273372..278101- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra5040.t1 ID=Ggra5040.t1|Name=Ggra5040.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=4730bp|location=Sequence derived from alignment at tig00000069_pilon:273372..278101- (Gracilaria gracilis GNS1m male) ATGATTCGAACATTGATCATGAAACCAATATATAACCAAGAACAATGGTT
GGAATTTTCGACCACGTTTCGCAAGGACGGGCGCATGCCAATGTCAAGGG
AGGCTTTGAGAATATTGTTGAAATCATATTATCAACACCAAATCGCCGCA
CGAGTTGGGTCGGAAAGAAATGTACTTGCTACCGATACATTCCAGCAGTT
GTTTGGCTCCGCTTCATGGTACCCGCAGGCAGTAGTCACCATTAAAGACG
TAGACATCACGTTTTCGTGTATGAAGCTTTTATGGGCGCTGAATAGACGA
GTAGAAGCGTACTCTGTCGTTGAGCAGTGTCGGAATGAGTAATTGCGGAA
TGCTGGTGTCGGCTTTACTGAAGATGGAATGCTCTTTGGTGTGCCGTCCG
AAGAGCTGGAAGCCAAACAGGTGACCGCCAGAGAGGTATTTTCCAAGCTC
TCGAAGTGGGGTCCCGAATGATTGACGGGAAAGAAGTTGAGGAGTCGTGC
ATTACCGATCCAATCATATATGCTGATCATGCTGTAAAGATTTGTCCTGA
ATGGAGCAAAGCGTGGCATCACTGGGGCCCTCTGAATGAAAATATTTTTC
TAGCACTTGTTGAAAAGCAAGGGGGAATTCCTGATGTTGGTTATCACCTT
GGAAATGGCATCAGGATTGGAAAACAAGAAAACAGATTCACTGTCGGAGC
TGTACAAGGTTACTCTAAGTCCATCGATTTGAAGGGTAGGACAGCCAATG
AAGATTCTTTGAGAGTTTTGACTCTGTGGTTCAACTTTGGCGGCTTAGAC
GATTATTATGTTGAGTTCGACAGAGGTTTTGAGAAGACCAATATCACAAT
GTGGCTTAAAGTTGTTCCACCAATAATTGCTCGTCTGTACACGCCATTCC
CTGAAGTTCAGCGAGGGGTACGAGTTTTTTTATCACGAATCGAAACGATG
CATCCCCAGGTGGCTGTATATCCCCTCACGGTAGCGAAGAAAGTGCATGC
TTCTCATCAAGAAAAGAGGGCTAGTAAAGCTACTCAGATCCTGGCGGGAA
ATAAGCTCAATCAAAAAGATAAGAAGCTAAAATGGTAGCAAACGAACTTG
TGAGGGTTGCCGTGTTGTGGTCTGAAATATGGTGTAAACGACTTGAAGAG
GCGTTTAAGCTTTACTTCATGAATCAGAAGATCTTCGAGATCATTGAAAC
AGTACTGCTGCAAGAGGCCACAGCGCGGGTGTTCCAGAAGTAGAAGACGC
GGCACCTATCTCTGCGTTTTCGGCTCTCGACGTAGAAGAAAAGGCAAAAA
ATATTCCTCTCGTTCTTGGGAAGAATAAAACGAAGCAGAAAAGCAAAAAC
GCCGCGGAATCTGAGCCATGGAAAGAAGCAGAAGAAGAACCATTAGATAC
CTCGTCTACTTACGCGTTTGCTTCCTTTGATATTGTCGATGAAGACGAGA
GTTCCACTCTTGAACACGAAGATTTTGCCGTCGCGGATATCGCTCCAAAG
AAGAAGAAAAATAGGAAGAAGAACAAAAAGCTTTGGAGCTTCCTGAACCA
CGAGTCGAGAATATATCACAGCCACCTGAAGTCGCAGAAGACGAGCCGCC
AGTAGAACCGAGGCGTCCGATGACCGGTGCTGAAGAGAATAAGGCGAAGA
AAGAACGTGAACGTCTCGCCAAAGAGAAAAAAGGCAAAGAAAGAAAGCGA
AGAACGTGATGCGCTGTTAGCCGAACTCGACGTACCTAAGGAGGGTACTT
GCATGGAACAACCAGTAAATGAGGCTCCTCAACAGGAGCAAGGAGCACCT
ACGCCATCAGGCTAGAAAAAGAAGAAGGGTAAAGCCAACGCAGCTGCCGC
TGCGGATGATGTCGACGCTTTCTTGGCTGAACTAGCAGGACCCGAAGCAA
TTGCGAAAGAAGAGCCAGGGCCAAAGGCAGATGCGGAAGTGGAAGTCTTG
TTGGAGGAACTGGGAAGAGCGGGGGATGCACCTGCCGCCAAAAAGAAGTC
CAAGAAGAAGAAGATAAAAAGTGCGGCAAAGGCAGAAGATGATGAGGATG
GGACCGGGGAAGGTGTGTTTGAAGCCTCTGAAGCTGAGAAGCCTAAGAAG
TAGTGTGCCATAGTGCGTAAGATGCGAGAACATGAAGAGAAGATGCTCGC
TGAACAAGAGCGGTTGCGCAAGCAAGAGGAGAAGGAAGTTAGTAGAATCG
CTGAAGAGCAACGTCAGAAAGAAGAGGAGGAGAAGAAGAAAGCGAAAGAG
AAGGCTAAGGGCAAGGCCGCGGAGAAGGTGAAGGGAGAACGAAAACACCA
GGAGGGTAATTTGCTTTCTAAGGCGGAGAAAGAAAGACGAAAAAATGCAG
AACCAATTAGGCAGCAGATGATAGCCATGGGGCTGGTTCTGGCTGCTTTG
ACACAGGAGAGTTCGGAAGCACCTGAGAGAGTGGTGTACAGTACAAAAAA
AAGGTAAGCCTAAAGGTACTGAGGAACCAGGAGTGGATCACTTTGAAGAA
GAAGTCCAAGCGACTACGAAAGAGCGTCTTCACGTCCCTGAAACTGAGAA
AGCGAAGGAGGTCCCTCAACCACAACCGCAGCCTGAAGTGATTCCTGATG
CTTGGGATGAACTACCTGACACGGGAGAAGGTGGATTGACAGCAGATAGA
GCACACAAAACCAAGAGTGGTCAAGCGGAGGGGTTTTCTTCTGGGCTTGA
ACAGGAGGAAAAAGCTGATGGAGATTCTGAGGAGTAAGAAACCGACGAGG
ATAATTCTGATGATTCCGAATATGAAGGAAGGACGAAGGCGGAGATTGAG
GAGGAGAAGAAACTCGAGGCTATACGAAAGACGCGAGCAAAGGAGAAGTC
AGTTGCGATGTCCGCGCGAATACGGGAACATCTTCGTTCTCCTATAATTT
GAGTTCTCGGCCATATAGATACAGGAAAGCCAAAGATCTTGGATCGAATT
CGCCGTACCAACGTTAAAGACGCCGAAGCAGGAGGCATCACACAGCAGAT
TGGTGTTACATATTTCCCTATTGATGCTGCAAAGAAGGAAGCAACAAAAC
TAGAAGCCGGGAAGAAGCTCACGTACAACGTGCCGTCTCTGTTTATTATC
GATACACCTAAACATGAGTCATTCAGCAATCTGCGTTCCCGGGGTTCTGC
ATTGTGTGATATTGCAATCCTTTTCGTGGATATCATGCATGGGTTGGAGC
CGCAGACGCGAAAAAGTATAGGTCTTTTGAAGATGAGAAAACTCCTTTCA
TAGTTTCACTGAGCAAAACTGATCGTATGTATAATTGGCAGGCTCAGGCG
CACAACTGCCTCACAAGAACAGCTCGCGAGAAGCAACTGCGTCATGTGCA
AGAAGAATTCGTACGAAGAGTCAAAGAAACTCAGCTTCAGTTTGCGGAGA
TTGGGTTCAACACCGAGCTGTATTGGGAAAACAAGGTGGTACGAAAGACC
GTCTCTTTGGTACCTACGTCACCCATTACTGGCGAAGGTATGCCGGACCT
GCTCACGCTTCTTTTGGCGCTCTCACAGAAACTGTTGACGGACAGGCTAA
TGTTCAGTTCTGTTCTTGAAGCAACTGTATTGAGGGTTAAGGTCAAAGAA
GGATTCGGCACGAGCATAGACATTATTCTCACAGGAGGGACAATCCACGA
AAGAGATACAATTATGATGGTTGGTCTTGATGGTCTTATTGTTACCGTGA
CTCGAGCACTTTTGACTCCTCATCGCATGAAGGAAATAAGAGTGAAGGGA
CAGTATCTCCATCACAAGGAGATCAAGGCAGCGCAGGGTATCAAGATTTC
AGCAGACGGTTTGGAAAAGGCTGTAGCCGGTACACAGCAAATGGTTGTAG
AAGATCCGTCTGATAAACAGGAGATAGAGTGTGTGCGTGGAGAGGTGATG
AAGGGCTTCCTAACCCCTATAAACCTCGACTATGGCCGAAATATGGCCGA
AATATGGCCGAAATGTGGCCGTTTAACTCGAAAAATTGTGAGAACGTTTA
AAAAGCGGAGATAAACAAGTTTCATTTTTCTTCATATGGCCGAAATATGG
CCCAAATGTGGCCTAAATATGGCCGAAGTGTACACCTGTCAGTTGGCTAA
AGTACTTTTTTTCCGAAGTTACACGTTCTCTGAAATTTTCGAGCTAAACG
GCCACATTTTGGGCATATCTCGGCCATATTTGGGCCATATTGGAGGTTTA
ACGTTATAACTATTCTAACTAATGTAGACAAGTCGGGACTTGGAGTGTGT
GTACAGGCTTATTTTCTTGGTTCACTTGAAGCGTTACTTGATTATCTTCG
ATCGACAAAGATTCCCGTATCTGGAATTAATATTCGTCCAGTGCATAAGA
GGGATGTGACGAAAGCCTCAACGATGCTGGAGAAATAGAAAGAGTATGCT
ACAATTCTTGGGTTTGATGTGCCTGTAGAGAAGGAGGCTCGCGAAGTGGC
TGAACATGTTGGCGTACAAATCGTCACGGGGGACATTGTCTATCACGTTT
TCGATCAGTTCACTGCTTACATGGAAAAGGTCAAGAAGAAGAGGCGTGAG
GCTGTGAATGATGAAATGGTGTTCCCTGTGATTGAAAGATCTACCGGAGC
ACGTGTACAAAAAGAAGGACGCCATCGTAGTTGGTGTGGGTGTGATGGAG
GGCATCCTAAGAGTTGGAACGCCTCTAGTGTTGAAACATGGAGCTCAATG
GCTAGACGTTGGACGCATAGTGAGCATTGA back to topCoding sequence (CDS) from alignment at tig00000069_pilon:273372..278101- >Ggra5040.t1 ID=Ggra5040.t1|Name=Ggra5040.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1383bp|location=Sequence derived from alignment at tig00000069_pilon:273372..278101- (Gracilaria gracilis GNS1m male) ATGATTCGAACATTGATCATGAAACCAATATATAACCAAGAACAATGGTT GGAATTTTCGACCACGTTTCGCAAGGACGGGCGCATGCCAATGTCAAGGG AGGCTTTGAGAATATTGTTGAAATCATATTATCAACACCAAATCGCCGCA CGAGTTGGGTCGGAAAGAAATGTACTTGCTACCGATACATTCCAGCAGTT GTTTGGCTCCGCTTCATGGTACCCGCAGGCAGTAGTCACCATTAAAGACG TAGACATCACGTTTTCGTCAGGACCCGAAGCAATTGCGAAAGAAGAGCCA GGGCCAAAGGCAGATGCGGAAGTGGAAGTCTTGTTGGAGGAACTGGGAAG AGCGGGGGATGCACCTGCCGCCAAAAAGAAGTCCAAGAAGAAGAAGATAA AAAGTGCGGCAAAGGCAGAAGATGATGAGGATGGGACCGGGGAAGGTGTG TTTGAAGCCTCTGAAGCTGAGAAGCCTAAGAAGAGAGTTCGGAAGCACCT GAGAGAGTGGTGTACAGTACAAAAAAAAGGTAAGCCTAAAGGTACTGAGG AACCAGGAGTGGATCACTTTGAAGAAGAAGTCCAAGCGACTACGAAAGAG CGTCTTCACGTCCCTGAAACTGAGAAAGCGAAGGAGGTCCCTCAACCACA ACCGCAGCCTGAAGTGATTCCTGATGCTTGGGATGAACTACCTGACACGG GAGAAGGAAAGCCAAAGATCTTGGATCGAATTCGCCGTACCAACGTTAAA GACGCCGAAGCAGGAGGCATCACACAGCAGATTGGTGTTACATATTTCCC TATTGATGCTGCAAAGAAGGAAGCAACAAAACTAGAAGCCGGGAAGAAGC TCACGTACAACGTGCCGTCTCTGTTTATTATCGATACACCTAAACATGAG TCATTCAGCAATCTGCGTTCCCGGGGTTCTGCATTGTGTGATATTGCAAT CCTTTTCTCGGGACTTGGAGTGTGTGTACAGGCTTATTTTCTTGGTTCAC TTGAAGCGTTACTTGATTATCTTCGATCGACAAAGATTCCCAAAGAGTAT GCTACAATTCTTGGGTTTGATGTGCCTGTAGAGAAGGAGGCTCGCGAAGT GGCTGAACATGTTGGCGTACAAATCGTCACGGGGGACATTGTCTATCACG TTTTCGATCAGTTCACTGCTTACATGGAAAAGGTCAAGAAGAAGAGGCGT GAGGCTGTGAATGATGAAATGGTGTTCCCTGTGATTGAAAGATCTACCGG AGCACGTGTACAAAAAGAAGGACGCCATCGTAGTTGGTGTGGGTGTGATG GAGGGCATCCTAAGAGTTGGAACGCCTCTAGTGTTGAAACATGGAGCTCA ATGGCTAGACGTTGGACGCATAGTGAGCATTGA back to top
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