Ggra3349.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3349.t1
Unique NameGgra3349.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length597
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000189_piloncontigtig00000189_pilon:79274..81064 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3349Ggra3349Gracilaria gracilis GNS1m malegenetig00000189_pilon 79274..81064 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3349.t1.stop1Ggra3349.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000189_pilon 79274..79276 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3349.t1.CDS1Ggra3349.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000189_pilon 79274..81064 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3349.t1.exon1Ggra3349.t1.exon1Gracilaria gracilis GNS1m maleexontig00000189_pilon 79274..81064 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3349.t1.start1Ggra3349.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000189_pilon 81062..81064 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3349.t1Ggra3349.t1Gracilaria gracilis GNS1m malepolypeptidetig00000189_pilon 79274..81064 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3349.t1 ID=Ggra3349.t1|Name=Ggra3349.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=597bp
MPGSPVSTPAEHDATIPLLVRMPDGSLEQVDVPPNAQLSAISAAFPDRLS
PDVRFSFANTDLDPHATLLDANIADAYAHANSLLNLIDSSSPDPDTKAAA
LDSANAVVERVSNGIKSMSALCAAAASEETPPHLSEETTHEDAVTPEQLA
RSLTLRLPKLFGQEDDPLADAPPPQQPSISSIREARRVIRDITLPKDERA
MPLSDDHHIGQSTNAPLAPPPQKQPSNDSIVLANGKNKTWLEDVGTTWNV
DTVRQSGVLFTSKLGLELDDYFKNLERSVLEEGQQQPEDDNAPDAAPDSA
PDHECPGDSSDEEGVHHVLPNGSAPIAQASTETTTPQVIPDINMAPPLHP
AATGNTNGPSSVQQPPGLMPLIAPTISRNPDPSSKPSIAPVSTIPPSITP
RTAPMSDIPMPSMPIPSREKSPASSTISAVGMTSPSVTSRGSVSTTPIAP
KQIHPAHLPPQPRQAAKIAPAPPTLPTSPLNANGMFGLPGMAVPVPSWGK
PVAPQVPVKKKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAA
EYEGKLNALINENTMLRKQVDGLSNRLQYMQSLLTVSVRNAAQPPS*
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spliced messenger RNA

>Ggra3349.t1 ID=Ggra3349.t1|Name=Ggra3349.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1791bp|location=Sequence derived from alignment at tig00000189_pilon:79274..81064- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTGGCTCCCCGGTGTCCACCCCCGCCGAGCACGATGCCACAATCCC
GCTGCTGGTGCGCATGCCGGACGGCTCGCTCGAGCAGGTCGACGTGCCGC
CCAACGCGCAGCTCAGCGCCATCTCCGCCGCGTTCCCGGACAGGCTGTCG
CCCGACGTGCGCTTCTCCTTCGCAAACACCGATCTCGATCCGCACGCCAC
GCTGCTGGATGCCAACATTGCCGACGCGTACGCGCACGCCAACTCGCTGC
TCAACCTCATCGACTCCTCCAGTCCGGACCCCGATACCAAGGCCGCTGCC
CTGGACTCCGCCAACGCCGTCGTCGAGAGGGTCTCCAATGGAATCAAGTC
CATGTCTGCCTTGTGTGCCGCCGCTGCGTCGGAGGAGACGCCGCCGCACC
TTTCCGAGGAGACTACGCACGAAGACGCTGTCACCCCGGAGCAGCTTGCT
CGTTCCTTGACCCTGCGTCTGCCAAAGCTCTTTGGTCAGGAAGATGACCC
TCTTGCGGACGCCCCCCCACCGCAGCAGCCGTCCATTTCAAGCATTCGTG
AAGCCAGACGCGTTATTCGTGACATCACTCTGCCGAAGGATGAGCGCGCC
ATGCCTTTGAGCGATGATCACCACATCGGCCAGAGTACCAATGCGCCGCT
GGCTCCACCGCCGCAGAAGCAACCCTCCAACGACAGTATCGTGCTGGCCA
ACGGCAAAAACAAGACCTGGCTTGAAGACGTCGGAACTACTTGGAATGTC
GACACTGTGCGTCAGAGTGGTGTACTCTTTACGTCAAAGCTGGGCCTGGA
GTTGGATGATTACTTCAAGAACCTTGAACGCTCTGTGCTAGAGGAGGGGC
AACAACAACCGGAAGACGACAACGCACCTGACGCTGCGCCCGACAGTGCT
CCCGACCATGAATGTCCAGGTGATTCTTCCGACGAGGAAGGAGTACACCA
CGTTCTCCCCAATGGATCTGCTCCTATCGCACAAGCATCCACAGAAACGA
CAACCCCGCAAGTTATCCCTGATATCAACATGGCACCCCCTTTACATCCT
GCTGCCACGGGCAACACTAATGGCCCGTCTTCAGTGCAACAACCACCCGG
TTTGATGCCTTTAATAGCTCCAACGATATCGCGTAATCCAGACCCATCTT
CCAAACCATCCATTGCACCGGTCTCGACAATTCCACCCTCCATAACCCCG
CGAACCGCGCCTATGTCAGACATACCGATGCCGTCAATGCCCATACCTTC
ACGTGAAAAGTCACCTGCATCGTCTACCATTTCCGCTGTAGGCATGACTT
CCCCGTCAGTTACCTCCCGAGGTTCTGTATCAACCACCCCCATAGCGCCA
AAGCAGATACACCCCGCTCACCTTCCACCGCAACCAAGGCAAGCGGCTAA
GATCGCGCCAGCTCCTCCTACCCTGCCCACGTCTCCCCTCAATGCAAATG
GCATGTTTGGCTTACCTGGTATGGCAGTGCCGGTGCCATCATGGGGAAAG
CCCGTTGCACCCCAGGTACCGGTCAAGAAGAAGCGGGGAAGGAAAAGAAA
GAACCCGGAACTGACGGATGAGGAACGTATTCTGTGGCGAAAACAACAGA
ACAGGGAAAGTGCAAAGCTGTCAAGGGTCAGGAGAAAGGTTATCGCTGCC
GAATACGAGGGAAAGCTAAATGCGCTTATCAATGAGAACACTATGCTTCG
AAAGCAGGTTGACGGCCTGAGCAACCGTTTGCAATATATGCAAAGCCTCC
TGACTGTTTCGGTCAGGAACGCCGCACAGCCACCTTCATAG
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protein sequence of Ggra3349.t1

>Ggra3349.t1 ID=Ggra3349.t1|Name=Ggra3349.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=597bp
MPGSPVSTPAEHDATIPLLVRMPDGSLEQVDVPPNAQLSAISAAFPDRLS
PDVRFSFANTDLDPHATLLDANIADAYAHANSLLNLIDSSSPDPDTKAAA
LDSANAVVERVSNGIKSMSALCAAAASEETPPHLSEETTHEDAVTPEQLA
RSLTLRLPKLFGQEDDPLADAPPPQQPSISSIREARRVIRDITLPKDERA
MPLSDDHHIGQSTNAPLAPPPQKQPSNDSIVLANGKNKTWLEDVGTTWNV
DTVRQSGVLFTSKLGLELDDYFKNLERSVLEEGQQQPEDDNAPDAAPDSA
PDHECPGDSSDEEGVHHVLPNGSAPIAQASTETTTPQVIPDINMAPPLHP
AATGNTNGPSSVQQPPGLMPLIAPTISRNPDPSSKPSIAPVSTIPPSITP
RTAPMSDIPMPSMPIPSREKSPASSTISAVGMTSPSVTSRGSVSTTPIAP
KQIHPAHLPPQPRQAAKIAPAPPTLPTSPLNANGMFGLPGMAVPVPSWGK
PVAPQVPVKKKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAA
EYEGKLNALINENTMLRKQVDGLSNRLQYMQSLLTVSVRNAAQPPS*
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mRNA from alignment at tig00000189_pilon:79274..81064-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3349.t1 ID=Ggra3349.t1|Name=Ggra3349.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1791bp|location=Sequence derived from alignment at tig00000189_pilon:79274..81064- (Gracilaria gracilis GNS1m male)
ATGCCTGGCTCCCCGGTGTCCACCCCCGCCGAGCACGATGCCACAATCCC
GCTGCTGGTGCGCATGCCGGACGGCTCGCTCGAGCAGGTCGACGTGCCGC
CCAACGCGCAGCTCAGCGCCATCTCCGCCGCGTTCCCGGACAGGCTGTCG
CCCGACGTGCGCTTCTCCTTCGCAAACACCGATCTCGATCCGCACGCCAC
GCTGCTGGATGCCAACATTGCCGACGCGTACGCGCACGCCAACTCGCTGC
TCAACCTCATCGACTCCTCCAGTCCGGACCCCGATACCAAGGCCGCTGCC
CTGGACTCCGCCAACGCCGTCGTCGAGAGGGTCTCCAATGGAATCAAGTC
CATGTCTGCCTTGTGTGCCGCCGCTGCGTCGGAGGAGACGCCGCCGCACC
TTTCCGAGGAGACTACGCACGAAGACGCTGTCACCCCGGAGCAGCTTGCT
CGTTCCTTGACCCTGCGTCTGCCAAAGCTCTTTGGTCAGGAAGATGACCC
TCTTGCGGACGCCCCCCCACCGCAGCAGCCGTCCATTTCAAGCATTCGTG
AAGCCAGACGCGTTATTCGTGACATCACTCTGCCGAAGGATGAGCGCGCC
ATGCCTTTGAGCGATGATCACCACATCGGCCAGAGTACCAATGCGCCGCT
GGCTCCACCGCCGCAGAAGCAACCCTCCAACGACAGTATCGTGCTGGCCA
ACGGCAAAAACAAGACCTGGCTTGAAGACGTCGGAACTACTTGGAATGTC
GACACTGTGCGTCAGAGTGGTGTACTCTTTACGTCAAAGCTGGGCCTGGA
GTTGGATGATTACTTCAAGAACCTTGAACGCTCTGTGCTAGAGGAGGGGC
AACAACAACCGGAAGACGACAACGCACCTGACGCTGCGCCCGACAGTGCT
CCCGACCATGAATGTCCAGGTGATTCTTCCGACGAGGAAGGAGTACACCA
CGTTCTCCCCAATGGATCTGCTCCTATCGCACAAGCATCCACAGAAACGA
CAACCCCGCAAGTTATCCCTGATATCAACATGGCACCCCCTTTACATCCT
GCTGCCACGGGCAACACTAATGGCCCGTCTTCAGTGCAACAACCACCCGG
TTTGATGCCTTTAATAGCTCCAACGATATCGCGTAATCCAGACCCATCTT
CCAAACCATCCATTGCACCGGTCTCGACAATTCCACCCTCCATAACCCCG
CGAACCGCGCCTATGTCAGACATACCGATGCCGTCAATGCCCATACCTTC
ACGTGAAAAGTCACCTGCATCGTCTACCATTTCCGCTGTAGGCATGACTT
CCCCGTCAGTTACCTCCCGAGGTTCTGTATCAACCACCCCCATAGCGCCA
AAGCAGATACACCCCGCTCACCTTCCACCGCAACCAAGGCAAGCGGCTAA
GATCGCGCCAGCTCCTCCTACCCTGCCCACGTCTCCCCTCAATGCAAATG
GCATGTTTGGCTTACCTGGTATGGCAGTGCCGGTGCCATCATGGGGAAAG
CCCGTTGCACCCCAGGTACCGGTCAAGAAGAAGCGGGGAAGGAAAAGAAA
GAACCCGGAACTGACGGATGAGGAACGTATTCTGTGGCGAAAACAACAGA
ACAGGGAAAGTGCAAAGCTGTCAAGGGTCAGGAGAAAGGTTATCGCTGCC
GAATACGAGGGAAAGCTAAATGCGCTTATCAATGAGAACACTATGCTTCG
AAAGCAGGTTGACGGCCTGAGCAACCGTTTGCAATATATGCAAAGCCTCC
TGACTGTTTCGGTCAGGAACGCCGCACAGCCACCTTCATAG
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Coding sequence (CDS) from alignment at tig00000189_pilon:79274..81064-

>Ggra3349.t1 ID=Ggra3349.t1|Name=Ggra3349.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1791bp|location=Sequence derived from alignment at tig00000189_pilon:79274..81064- (Gracilaria gracilis GNS1m male)
ATGCCTGGCTCCCCGGTGTCCACCCCCGCCGAGCACGATGCCACAATCCC
GCTGCTGGTGCGCATGCCGGACGGCTCGCTCGAGCAGGTCGACGTGCCGC
CCAACGCGCAGCTCAGCGCCATCTCCGCCGCGTTCCCGGACAGGCTGTCG
CCCGACGTGCGCTTCTCCTTCGCAAACACCGATCTCGATCCGCACGCCAC
GCTGCTGGATGCCAACATTGCCGACGCGTACGCGCACGCCAACTCGCTGC
TCAACCTCATCGACTCCTCCAGTCCGGACCCCGATACCAAGGCCGCTGCC
CTGGACTCCGCCAACGCCGTCGTCGAGAGGGTCTCCAATGGAATCAAGTC
CATGTCTGCCTTGTGTGCCGCCGCTGCGTCGGAGGAGACGCCGCCGCACC
TTTCCGAGGAGACTACGCACGAAGACGCTGTCACCCCGGAGCAGCTTGCT
CGTTCCTTGACCCTGCGTCTGCCAAAGCTCTTTGGTCAGGAAGATGACCC
TCTTGCGGACGCCCCCCCACCGCAGCAGCCGTCCATTTCAAGCATTCGTG
AAGCCAGACGCGTTATTCGTGACATCACTCTGCCGAAGGATGAGCGCGCC
ATGCCTTTGAGCGATGATCACCACATCGGCCAGAGTACCAATGCGCCGCT
GGCTCCACCGCCGCAGAAGCAACCCTCCAACGACAGTATCGTGCTGGCCA
ACGGCAAAAACAAGACCTGGCTTGAAGACGTCGGAACTACTTGGAATGTC
GACACTGTGCGTCAGAGTGGTGTACTCTTTACGTCAAAGCTGGGCCTGGA
GTTGGATGATTACTTCAAGAACCTTGAACGCTCTGTGCTAGAGGAGGGGC
AACAACAACCGGAAGACGACAACGCACCTGACGCTGCGCCCGACAGTGCT
CCCGACCATGAATGTCCAGGTGATTCTTCCGACGAGGAAGGAGTACACCA
CGTTCTCCCCAATGGATCTGCTCCTATCGCACAAGCATCCACAGAAACGA
CAACCCCGCAAGTTATCCCTGATATCAACATGGCACCCCCTTTACATCCT
GCTGCCACGGGCAACACTAATGGCCCGTCTTCAGTGCAACAACCACCCGG
TTTGATGCCTTTAATAGCTCCAACGATATCGCGTAATCCAGACCCATCTT
CCAAACCATCCATTGCACCGGTCTCGACAATTCCACCCTCCATAACCCCG
CGAACCGCGCCTATGTCAGACATACCGATGCCGTCAATGCCCATACCTTC
ACGTGAAAAGTCACCTGCATCGTCTACCATTTCCGCTGTAGGCATGACTT
CCCCGTCAGTTACCTCCCGAGGTTCTGTATCAACCACCCCCATAGCGCCA
AAGCAGATACACCCCGCTCACCTTCCACCGCAACCAAGGCAAGCGGCTAA
GATCGCGCCAGCTCCTCCTACCCTGCCCACGTCTCCCCTCAATGCAAATG
GCATGTTTGGCTTACCTGGTATGGCAGTGCCGGTGCCATCATGGGGAAAG
CCCGTTGCACCCCAGGTACCGGTCAAGAAGAAGCGGGGAAGGAAAAGAAA
GAACCCGGAACTGACGGATGAGGAACGTATTCTGTGGCGAAAACAACAGA
ACAGGGAAAGTGCAAAGCTGTCAAGGGTCAGGAGAAAGGTTATCGCTGCC
GAATACGAGGGAAAGCTAAATGCGCTTATCAATGAGAACACTATGCTTCG
AAAGCAGGTTGACGGCCTGAGCAACCGTTTGCAATATATGCAAAGCCTCC
TGACTGTTTCGGTCAGGAACGCCGCACAGCCACCTTCATAG
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