Ggra3349.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3349.t1
Unique NameGgra3349.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length597
Homology
BLAST of Ggra3349.t1 vs. uniprot
Match: A0A2V3IGA8 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGA8_9FLOR)

HSP 1 Score: 539 bits (1389), Expect = 2.580e-183
Identity = 340/605 (56.20%), Postives = 398/605 (65.79%), Query Frame = 0
Query:    4 SPVSTPA-EHDATIPLLVRMPDGSLEQVDVPPNAQLSAISAAFPDRLSPDVRFSFANTDLDPHATLLDANIADAYAHANSLLNLIDSSSPDPDTKAAALDSANAVVERVSNGIKSMSALCAAAASEETPPHLSEETTHEDAVTPEQLARSLTLRLPKLFGQEDDPLADAPPPQQPSISSIREARRVIRDITLPKDERAMPLSDDHHIGQSTNAPLAPPPQKQP-SNDSIVLANGKNKTWLEDVGTTWNVDTVRQSGVLFTSKLGLELDDYFKNLERSVLEEGQQQPEDDNAPDXXXXXXXXHE--CPGDSSDEEGVHHVLPNGSAPIAQASTETTTPQVIPDINMAPPLH-------PAATGNTNGPSSVQQ-------PPGLMPLIAPTISRNPDPSSKPSIAPVSTIPPSITPRTAPMSDXXXPSMPIPSREKSPASSTISAVGMTSPSVTSRGSVSTTPIAPKQIHPAHLPPQPRQAAKIAPAPPTLPTSPLNANGMFGLPGMAVPVPSWGKPVAPQVPVKKKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAAEYEGKLNALINENTMLRKQVDGLSNRLQYMQSLLTVSVRN 590
            SP + P  + D TI LLVRMPDG+LEQVDV PNA +++ISAA PD+LSP  R+SFAN DLDP ATLLDANIADAYAHANSLLNLIDSSSPDP+TKAAALDSA AVVER+SNGIKSMSALCA           SE+ TH D+VTPEQLARSLT RLP+LF  EDDPLA+  PP QPSISSIR+ARR IR+ +LP+DE A+  +DDH IGQSTN PL  PP+K+  SND+I+LAN    TWL+DV TTW VDTVRQSGVL +SK+GLELDDY ++LE+S+       PE +   D         E    GDSSD++  H V P  +  + Q +T    P      +  P  H       P +T  T   SSV Q       PP   P   P +S +          P +   PS+ P T   +     S+   S   +  S   SA  +T+P        S++  +    H A      RQAA+IAPAP    T+P   NGMFG  G+ VP+  W K   PQ P+KKKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAAEYEGKLNALINENTML+KQVDGL NRL YMQSLLTVSV+N
Sbjct:    9 SPENAPEPDSDNTIQLLVRMPDGTLEQVDVAPNAPIASISAALPDKLSPGARYSFANVDLDPDATLLDANIADAYAHANSLLNLIDSSSPDPETKAAALDSACAVVERISNGIKSMSALCAXXXXXXXXXXXSEDATH-DSVTPEQLARSLTTRLPRLFAPEDDPLAEVLPPPQPSISSIRDARRAIRESSLPRDEHALDDNDDHLIGQSTNGPLPRPPRKESASNDNIILANSGKTTWLDDVKTTWEVDTVRQSGVLSSSKMGLELDDYLRSLEQSL-------PEQERISDGLNGSTQHREELVAGDSSDDDHPHSVPPIDA--VLQQNTPQPAPPSHSSSHSTPSTHLSSANGDPGSTKMTPSASSVAQAQNVLQFPPRSQP---PKVSTSTSTPLHQHYPPTTAAQPSVVPSTTQPAHALRASIAASSAMPTSPSVHSSATTITAPLSVGNADPSSSAASFAAQHSAQ-----RQAARIAPAPQL--TAPSMGNGMFGFSGVQVPLAPWAKQAVPQAPLKKKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAAEYEGKLNALINENTMLKKQVDGLENRLAYMQSLLTVSVKN 593          
BLAST of Ggra3349.t1 vs. uniprot
Match: R7QD28 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD28_CHOCR)

HSP 1 Score: 246 bits (629), Expect = 2.020e-69
Identity = 244/667 (36.58%), Postives = 310/667 (46.48%), Query Frame = 0
Query:   15 TIPLLVRMPDGSLEQVDVPPNAQLSAISAAF-PDRLSPDVRFSFANTDLDPHATLLDANIADAYAHANSLLNLIDSSSPDPDTKAAALDSANAVVERVSNGIKSMSALCAAA-------------------------ASEETPPHLSE----------------------ETTHEDAVTPEQLARSLTLRLPKLFG------------------QEDDPLADA--PPPQQPSISSIREAR---RVIRDITLPKDERAMPLSDDHH---IGQSTNA-PLAPPP-----------QKQPSNDSIVLANGKNKTWLEDVGTTWNVDTVRQSGVLFTSKLGLELDDYFKNLERSVLEEGQQQPEDDNAPDXXXXXXXXHECPGDSSDEEGVHHVLPNGSAPIAQASTETTTPQVIPDINMAPPLHPAATGNTNGPSSVQQPPGLMPLIAPTISRNPDPS-SKPSIAPVSTIPPSITPRTAPMSDXXXPSMPIPSREKSPASSTISAVGMTSPSVTSRGSVSTTPIAPKQIHPAHLPPQPRQAAKIAPAPPTLPTSPLNA--NGMFG---LPGMAVPVPSWGKPVAPQVPVKKKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAAEYEGKLNALINENTMLRKQVDGLSNRLQYMQSLLTVSVR 589
            TIPLLVR  +G   Q+DVP  + +  +SA   P + S D+R +F N DL P A+LLD NI DAY HA SLL LI S   DP  KAAAL SA AVVE VSNG+K M ALCAAA                         A+ ETP  L                        +     A TP ++A  L+ RLP LF                   Q+ DP          QPSI++IREAR   R  R++  P ++  +      H   IG STN   L   P            + PS  S+ +A     TWLEDV  TW V  VR+SGVL  +K G EL+DYF  L+     E Q+  E +                     E     VL  GSA    +  E  T +   +   A       +G+  G  S   P      +    +     S ++P+              +A  S    P+ P+PS     ++ T S+    S S + +   S  PI P       + P  RQA KIAPAPP +   P+    NG +    LPG     P            +KKRGRKRK+PEL+DEER L+RK+QNRESAKLSRVRRKVIAAEYEG+L+ L+ ENT LRK+V+GL+NRL Y+QSLLTVSVR
Sbjct:   53 TIPLLVRGLNGEHSQIDVPITSTVDELSALIRPGQSSDDLRLTFGNEDLPPGASLLDTNIIDAYEHAGSLLTLIGSGGGDPAAKAAALQSACAVVETVSNGVKDMEALCAAAVDPSLHQQSPNDARTAALLREGAVEAARETPKELDASEFTMLNAILTRPGRMLPQDTVDAPQHKAATPAEVALGLSRRLPLLFPPKAAAAFAEPAGPHAHQKQDQDPALTVRVSTAAQPSIAAIREARAARRKERELRAPMEDVKIANEQAAHAVTIGNSTNGMALTDMPGRDGNLEVTNGSQMPSGGSLRMAADAKSTWLEDVMKTWEVGVVRESGVLEKTKEGQELNDYFHGLDA----EAQRDIETERI-------------------EAETAEVLQKGSAQGKSSHLEGNTQEDSEEEEEA-----NTSGDGEGGVSTCSPSDKDVHMTQFHAEGTAQSLNRPA-------------NSASNSSHTEPTSPLPS-----STGTQSSRKSASSSASPQPCDSAKPIKPSTA----VSPPIRQAKKIAPAPP-IAMGPIGMPLNGFYPSPILPGREGD-PGXXXXXXXXXXARKKRGRKRKHPELSDEERALFRKEQNRESAKLSRVRRKVIAAEYEGRLSRLLGENTHLRKEVEGLNNRLVYLQSLLTVSVR 667          
BLAST of Ggra3349.t1 vs. uniprot
Match: A0A2V3ITI3 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITI3_9FLOR)

HSP 1 Score: 141 bits (356), Expect = 2.290e-36
Identity = 77/108 (71.30%), Postives = 84/108 (77.78%), Query Frame = 0
Query:  484 GMFGLPGMAVPVPSWGKPVAPQVPVKKKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAAEYEGKLNALINENTMLRKQVDGLSNRLQYMQSLLTVSVRNA 591
            GMFG  G+ VP+  W K   P+  +KKKRGRK KNPELTDEER+LWRKQQN E AKLSRVRRKV  AEYE  LN LINENTML+KQVD   NRL  MQSLLTVSV+NA
Sbjct:    4 GMFGFSGVQVPLAPWAKQAVPKALLKKKRGRKCKNPELTDEERVLWRKQQNTEGAKLSRVRRKVNGAEYESNLNVLINENTMLKKQVDEHENRLACMQSLLTVSVQNA 111          
BLAST of Ggra3349.t1 vs. uniprot
Match: A0A2V3IMV7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMV7_9FLOR)

HSP 1 Score: 111 bits (278), Expect = 7.440e-26
Identity = 61/80 (76.25%), Postives = 66/80 (82.50%), Query Frame = 0
Query:  483 NGMFGLPGMAVPVPSWGKPVAPQVPVKKKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAAEYEGKLNALINE 562
            NGMF   G+ V +  WGK   PQ  +KK+RGRKRKNPELTDEERILWRK QNRESAKLS VRRKVIAAEYEGKLNALIN+
Sbjct:   13 NGMFVFLGVQVCLAPWGKQALPQALLKKRRGRKRKNPELTDEERILWRKHQNRESAKLSLVRRKVIAAEYEGKLNALINK 92          
BLAST of Ggra3349.t1 vs. uniprot
Match: A0A2V3J5H1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5H1_9FLOR)

HSP 1 Score: 111 bits (278), Expect = 4.720e-22
Identity = 169/612 (27.61%), Postives = 242/612 (39.54%), Query Frame = 0
Query:   14 ATIPLLVRMPDGSLEQVDVPPNAQLSAIS---AAFPDRLSPD------VRFSFANTDLDPHATLLDANIADAYAHANSLLNLI-DSSSPDPDTKAAALDSANAVVERVSNGIKSMSALCAAAASEETPPHLSEETTHEDAVTPE--QLARSLTLRLPKLFGQEDDPLA------------DAPPPQQPSISSIREARRVIRDITLP-KDERAMPLSDDHHIGQSTNAPLAPPPQKQPSNDSIVLANGKNK---TWLEDVGTTWNVD--TVRQSGVLFTSKLGLELDDYFKNLERSVLEEGQQQPEDDNAPDXXXXXXXXHECPGDSSDEEGVHHVLPNGSAPIAQASTETTTPQVIPDINMAPPLHPAATGNTNGPSSVQQPPGLMPLIAPTISRNPDPSSKPSIAPVSTIPPSITPRTAPMSDXXXPSMPIPSREKSPASSTISAVGMTSPSVTSRGSVSTTPIAPKQIHPAHLPPQPRQAAKIAPAPPTLPTSPLNANGMFGL-PGMAVPVPSWGKPVAPQVPVKKKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAAEYEGKLNALINENTMLRKQVDGLSNRLQYMQSLLTVSVRNAAQP 594
            A++PLLVRMPDG   QVDVPPNA +  +    A  P +LS        +   F    L+ + TL   NI + Y HA+  L  I DS   D + K  ALD A AVV  +S G K M  L  A   +     L ++T    +  P    + RS   R+P L     +P+              APP  +  +  +   R  + D     K   ++ L+   +IG  +            +N+S    NG+ K   TW +D+ TT N      R+ G      L  +  D+  ++E +   E  +  E    P+              SS    +  +L   ++P     T+ T  Q    +   P  +     N    SSV                     +K S AP                D    +      EKS                T++GS S              PP    + K+ P  P     P     + GL P    P  +  +P  P+     +RGRKRKNP L++EER      QNRESAKLSR+RRK +  EYE ++N+L  EN  LR  +  L +RLQ +Q+LLT+SV+  A P
Sbjct:   22 ASLPLLVRMPDGENHQVDVPPNASVKDLKTSIANLPWQLSDSDPQQQSLELEFGGETLNDNQTLSHYNIPEVYDHADGFLKTISDSGYLDHEKKVEALDKACAVVRGISRGEKDMERLLGAVFDD-----LHDDTPGSPSAQPSLRSMRRSRPSRIPSLNFGALNPIGVGGRSNSRLFSPSAPPTPRQLMRKLSLLRPDLYDTAAAEKATSSLSLAIPTNIGNKSAVR---------ANESQSQGNGELKRGNTWFQDIMTTINSSHRDPRKRG-----DLNDDDQDHGDDVEGNSEGENSEDLEALTDPNASGAK---------SSTLVELGDILKQSTSPTNSIKTDGTASQPGTSLVSKPTQNDQLKFNEQQQSSVDD-------------------AKSSAAPAG--------------DSALTTKAQGGPEKSLKVEGALPTSTDGKGTTNQGSASQ-------------PPPSSNSTKVIPGRPI----PNQDKQVIGLTPERQTPATASQEPRLPR-----RRGRKRKNPHLSEEERKAQXXAQNRESAKLSRIRRKHMTLEYERRVNSLEGENENLRGTISALEDRLQMLQNLLTISVQRRAIP 550          
BLAST of Ggra3349.t1 vs. uniprot
Match: A0A1X6P6M8 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6M8_PORUM)

HSP 1 Score: 81.3 bits (199), Expect = 2.770e-12
Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 0
Query:  500 KPVAPQVPVKKKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAAEYEGKLNALINENTMLRKQVDGLSNRLQYMQSLLTVSVRNAAQPPS 596
            K   P+VP  KKRGRKRKNPELTD +RI  R+ QNR+SAK SR+RRK  AA+++  ++ L NEN+ LR+ V  L  RL+ ++S+LT SV      P+
Sbjct:  538 KAAGPRVP--KKRGRKRKNPELTDAQRIQVRQAQNRQSAKQSRLRRKAQAADHQRMVSELTNENSHLRETVGSLHARLKMLESILTESVTLPGSGPA 632          
BLAST of Ggra3349.t1 vs. uniprot
Match: A0A5J4YR32 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YR32_PORPP)

HSP 1 Score: 76.3 bits (186), Expect = 5.770e-11
Identity = 44/83 (53.01%), Postives = 60/83 (72.29%), Query Frame = 0
Query:  510 KKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAAEYEGKLNALINENTMLRKQVDGLSNRLQYMQSLLTVSVRNAA 592
            KKRGRKRK PELT+E+R   RK QNRESAK SR R+KV+  +YE  ++ ++ EN  L+ +++ LS RL+ MQ LL V V+ +A
Sbjct:  398 KKRGRKRKFPELTEEQRAELRKIQNRESAKKSRERKKVLNKDYETMIDGVLVENQQLKSRLETLSQRLEMMQRLLAVQVKPSA 480          
BLAST of Ggra3349.t1 vs. uniprot
Match: A0A7S1T822 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T822_9RHOD)

HSP 1 Score: 75.9 bits (185), Expect = 7.330e-11
Identity = 42/81 (51.85%), Postives = 58/81 (71.60%), Query Frame = 0
Query:  510 KKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAAEYEGKLNALINENTMLRKQVDGLSNRLQYMQSLLTVSVRN 590
            +KRGRKRK P LT+EER   R+ +NRESA+ SR R++ I  +YE K+ A+  EN  L  QV  LSNRL++++ +LTV VR+
Sbjct:  389 RKRGRKRKFPHLTEEERRTMRRDRNRESARRSRDRKRNIQKQYESKITAVRKENDSLEGQVSALSNRLEFLKQILTVHVRS 469          
BLAST of Ggra3349.t1 vs. uniprot
Match: A0A7S0T7X4 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7X4_9RHOD)

HSP 1 Score: 70.9 bits (172), Expect = 1.100e-9
Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 0
Query:  508 VKKKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAAEYEGKLNALINENTMLRKQVDGLSNRLQYMQSLLTVSV 588
            V KKRGRKRKNP+LTD +R+  RK QNR SAK SR ++KV   E+  ++  +++EN  L+ +++ L  RL  MQ LL V V
Sbjct:  225 VPKKRGRKRKNPQLTDAQRMEERKMQNRASAKKSREKKKVQTVEHVQRIETILHENQSLKAELEHLGKRLDLMQQLLAVQV 305          
The following BLAST results are available for this feature:
BLAST of Ggra3349.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IGA82.580e-18356.20BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QD282.020e-6936.58Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ITI32.290e-3671.30BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IMV77.440e-2676.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5H14.720e-2227.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P6M82.770e-1251.55Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YR325.770e-1153.01Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S1T8227.330e-1151.85Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0T7X41.100e-949.38Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 549..576
NoneNo IPR availableGENE3D1.20.5.170coord: 521..592
e-value: 1.6E-7
score: 33.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..340
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..400
NoneNo IPR availableCDDcd14686bZIPcoord: 530..578
e-value: 5.99737E-10
score: 52.9329
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 524..580
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 522..586
e-value: 4.0E-11
score: 52.9
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 530..583
e-value: 1.3E-8
score: 34.8
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 524..587
score: 9.668327
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 8..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000189_piloncontigtig00000189_pilon:79274..81064 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3349.t1Ggra3349.t1Gracilaria gracilis GNS1m malemRNAtig00000189_pilon 79274..81064 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3349.t1 ID=Ggra3349.t1|Name=Ggra3349.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=597bp
MPGSPVSTPAEHDATIPLLVRMPDGSLEQVDVPPNAQLSAISAAFPDRLS
PDVRFSFANTDLDPHATLLDANIADAYAHANSLLNLIDSSSPDPDTKAAA
LDSANAVVERVSNGIKSMSALCAAAASEETPPHLSEETTHEDAVTPEQLA
RSLTLRLPKLFGQEDDPLADAPPPQQPSISSIREARRVIRDITLPKDERA
MPLSDDHHIGQSTNAPLAPPPQKQPSNDSIVLANGKNKTWLEDVGTTWNV
DTVRQSGVLFTSKLGLELDDYFKNLERSVLEEGQQQPEDDNAPDAAPDSA
PDHECPGDSSDEEGVHHVLPNGSAPIAQASTETTTPQVIPDINMAPPLHP
AATGNTNGPSSVQQPPGLMPLIAPTISRNPDPSSKPSIAPVSTIPPSITP
RTAPMSDIPMPSMPIPSREKSPASSTISAVGMTSPSVTSRGSVSTTPIAP
KQIHPAHLPPQPRQAAKIAPAPPTLPTSPLNANGMFGLPGMAVPVPSWGK
PVAPQVPVKKKRGRKRKNPELTDEERILWRKQQNRESAKLSRVRRKVIAA
EYEGKLNALINENTMLRKQVDGLSNRLQYMQSLLTVSVRNAAQPPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR029071Ubiquitin-like_domsf