Gchil6953.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6953.t1
Unique NameGchil6953.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length503
Homology
The following BLAST results are available for this feature:
BLAST of Gchil6953.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..141
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..121
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..94
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 142..502
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..116
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..55
NoneNo IPR availableTMHMMTMhelixcoord: 55..74
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 113..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004398_piloncontigtig00004398_pilon:285843..287351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6953.t1Gchil6953.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004398_pilon 285843..287351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6953.t1 ID=Gchil6953.t1|Name=Gchil6953.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=503bp
MPILHRFPLLLVTILFNLHCSDALPLPGEHPIPGIHPVLQPIASEPRQSH
AIPTSIVRGFLLAIIIPVLCRFITDCLDNLSSRFPAWVSLLYFKIFFLIG
TYIISVIAGLTVFIYSVIVSSFEFGCTGIGILLGIYSGNYLSLTSSSSLR
KIWRCKPRFKTLSEAGKRLLPHALKLLIRLAMSPHFSNHLPFNMRLDLVI
FYLEQLPDVHLLEAFLNADTSIPLRTCLSLQELHRQIPRFMQLQLAAWPL
LPDAFRSLVKGAFEQDYSNTLPFTSRIKLVAYCVELNDRDLLEVFLHREL
GNSSTFSLKLEQLLGRLPDPSLLPGTGRKRLPHALKNLLQLASNETSSIG
IPFHVQVELVMLYLKLSEPHSNEITLPDWIRNYNPTQNGAAVVPNCAEFH
WILEWARRFQETLSAYPLPRREVSPGDVKDAVNICSTLPLPTSIPEQHED
HVIRLVTAVYARIKSLGSTHPRLYSWFMQQECAGVDVCVRSWFPPRIVSD
EN*
back to top