Gchil6579.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6579.t1
Unique NameGchil6579.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length374
Homology
BLAST of Gchil6579.t1 vs. uniprot
Match: A0A2V3J090_9FLOR (BHLH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J090_9FLOR)

HSP 1 Score: 419 bits (1078), Expect = 6.240e-143
Identity = 222/383 (57.96%), Postives = 266/383 (69.45%), Query Frame = 0
Query:    1 MESNTALVSPLPPDFALLDDALLLAHQNS--LPPSDTRASDFDLSLPLHDGSA-LFVIPQKFNPHSFFVPSLSATDGIHSDFSPERLFSLTSADGDSQSADDSST----------LHLHATRGDVTRLAPPEPPALRPNVSHTRRCRAKVNTNFERLLQVLPDPSSGIEVKHKAQVLQYAIDYYKHVSCKNRMLEMKLALRSPSEMYRWVQSVVSASPNLKETLKSFIAMICLTKNWKYAELWAPQTRAGSSSVSLRYVAGALPPTVGGEALHRLRKYRARSRKYKFPPRCGVPGRVFLTMRPEWLPLLNDPVAFPRAPHAVRNQVQVTFAVPVIVNGAVEMVVEFFDTERRDYDPATLNMANDIAAMFGKAFTEKDTSRCAS 370
            M+S + L +  P D    DD +    Q +  +P     +   DL+L   D          K +P  FF+P  +A + +HS+F+    F LT  + D QS DDSST                              LRPNVSHTRRCRAK+NTNF+RLLQVLP P  G+EVKHKAQ+LQYAID+Y+HV CKN  LEM LAL S S M+RWVQSVV  SPNL+++LKSF+AMICLTKNWKYAELW+P T   SSSV+L Y +GALPPTV GE LHRL+ YR +SRKY F PR GVPGRVFLTMRPEWLPLLNDPVAFPRAPHAVRN+V+VTFAVPV+VNG+V+MVV+F+DT RRDY+PATLNM N+IAAMFGKAFT  ++S  A+
Sbjct:    1 MDSISTLPADFPKDIPPRDDHMFPTVQQATDIPLDQFASPPIDLTLSDTDNPTNTLYYHSKLHPQPFFIPPQAAIEILHSEFASPLPFDLTLPEPDCQSVDDSSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRPNVSHTRRCRAKLNTNFDRLLQVLPKPPPGVEVKHKAQILQYAIDHYRHVRCKNVKLEMTLALSSRSHMHRWVQSVVHTSPNLRDSLKSFMAMICLTKNWKYAELWSPHTPTDSSSVALTYASGALPPTVEGEELHRLKAYRVKSRKYTFAPRSGVPGRVFLTMRPEWLPLLNDPVAFPRAPHAVRNRVEVTFAVPVVVNGSVKMVVQFYDTYRRDYEPATLNMTNEIAAMFGKAFTAINSSPFAN 383          
BLAST of Gchil6579.t1 vs. uniprot
Match: R7QJ09_CHOCR (BHLH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ09_CHOCR)

HSP 1 Score: 181 bits (459), Expect = 1.090e-50
Identity = 101/262 (38.55%), Postives = 147/262 (56.11%), Query Frame = 0
Query:  128 SHTRRCRAKVNTNFERLLQVLPDPSSGIEVKHKAQVLQYAIDYYKHVSCKNRMLEMKLALRSPSEMYRWVQSVVSASPNLKETLKSFIAMICLTKNWKYAELWAPQTR--------------AGSSSV----------SLRYVAG-ALPPTVGG----EALHRLRKYRARSRKYKFPPRCGVPGRVFLTMRPEWLPLLNDPVAFPRAPHAVRNQVQVTFAVPVIVNGAVEMVVEFFDTERRDYDPATLNMANDIAAMFGKAF 360
            SHTRRCRAKVN  F+ LL +LP P     +KHKAQ+L YAI  Y+ +  +  +LE +LAL S S++  WV  +V  S +L++ L  ++++IC    WKY+E W P  +              +G S+V          + R   G A+ P++G     +   +L ++R +SR Y+   R  +PGRV  TMRPEWLP LND  AF RA  A    + V F VPV + G +  V  FFDT++R YD   +++A++I+ + G AF
Sbjct:   46 SHTRRCRAKVNLKFQELLSILPTPPPKTGIKHKAQILDYAIRVYRDIHARKTLLEAELALSSRSQLNAWVDGIVLRSISLQDALAPYLSLICTKGGWKYSEAWIPAQQPIPSQPVRGKVEAVSGESNVLTPTTLLSGPTARLRLGLAVIPSLGNTDDPDLQTKLERFRDKSRAYQCKARVDLPGRVMCTMRPEWLPSLNDQEAFQRAHLAHNANLVVCFGVPVFICGHIAAVAVFFDTDQRAYDAKCVDLADNISGLLGNAF 307          
BLAST of Gchil6579.t1 vs. uniprot
Match: A0A2V3ILC3_9FLOR (BHLH domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILC3_9FLOR)

HSP 1 Score: 180 bits (457), Expect = 5.020e-49
Identity = 96/260 (36.92%), Postives = 145/260 (55.77%), Query Frame = 0
Query:  130 TRRCRAKVNTNFERLLQVLPDPSSGIEVKHKAQVLQYAIDYYKHVSCKNRMLEMKLALRSPSEMYRWVQSVVSASPNLKETLKSFIAMICLTKNWKYAELWAPQTRAGSSSVS---LRYVAG----------------------ALPPTVGG----EALHRLRKYRARSRKYKFPPRCGVPGRVFLTMRPEWLPLLNDPVAFPRAPHAVRNQVQVTFAVPVIVNGAVEMVVEFFDTERRDYDPATLNMANDIAAMFGKAF 360
            TR+CRAKVN+ F+ LL +LP P +   +KHKAQ+L+Y I  Y+ +  +  +LE +LAL SPS++  W+ ++VS S +L++ L  ++++IC    WKY+E W P     S++ +   LR + G                      A+ P++G     +   +L ++R RSR Y   PR  +PGR+  TMRPEWLP L D  AF RA  A    + V F VP+ +   V  V  F+DT++R YD   L++A  +A M G A+
Sbjct:  175 TRKCRAKVNSKFKELLGILPAPPANTGIKHKAQILEYTIRVYRDIHARKTLLEAELALSSPSQLNAWISNIVSRSRSLQDALAPYLSLICTKGAWKYSEAWVPLQEPESNTTNDSQLRAITGESRFLTPANMLLGPNARLRLGLAVIPSLGNTDDPDLQPKLERFRDRSRPYTCKPRVDLPGRIMCTMRPEWLPSLEDHEAFQRAKLARDASLVVCFGVPIFIGDHVAAVAVFYDTDQRTYDAKCLDLAVRVARMLGSAY 434          
BLAST of Gchil6579.t1 vs. uniprot
Match: A0A7S1TET1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TET1_9RHOD)

HSP 1 Score: 175 bits (444), Expect = 2.190e-46
Identity = 92/244 (37.70%), Postives = 136/244 (55.74%), Query Frame = 0
Query:  128 SHTRRCRAKVNTNFERLLQVLPDPSSGIEVKHKAQVLQYAIDYYKHVSCKNRMLEMKLALRSPSEMYRWVQSVVSASPNLKETLKSFIAMICLTKNWKYAELWAPQTRA---------GSSSVSLRYVAGALPPTVGGEAL--HRLRKYRARSRKYKFPPRCGVPGRVFLTMRPEWLPLLNDPVAFPRAPHAVRNQVQVTFAVPVIVNGAVEMVVEFFDTERRDYDPATLNMANDIAAMFGKAF 360
            SHTRRCR KVN  F+ L+  LP P +G E+KHKAQ+L Y+I   K ++ +   LE +LAL +   +  WV  VV+ + +  + +  F+ M+C  K WK AELW P               +   L+ +  +    +  +    HR+ ++   SR++KF P CG PGRV+ TMRPEWL  L+D   FPRA  A +  +    ++P ++NG V  VV  +D E+R+ D   L++A DIA + G AF
Sbjct:  269 SHTRRCREKVNEKFQTLMNELPPPPTGTEIKHKAQILDYSIRVLKDLASRKAALESELALSNRRNLLGWVDRVVNDAEDFPDAINPFLKMMCSKKAWKCAELWVPVEERVMVSCPLPQSETPTRLKLLRASFHENLEQDPPRHHRIHEFIDESRRFKFTPTCGSPGRVYSTMRPEWLHDLSDEQVFPRAELASKAGLVTCLSIPFLINGRVRGVVCLYDDEKRECDMGDLDLAFDIAILIGNAF 512          
BLAST of Gchil6579.t1 vs. uniprot
Match: A0A1X6PIG4_PORUM (BHLH domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIG4_PORUM)

HSP 1 Score: 176 bits (446), Expect = 6.240e-46
Identity = 116/343 (33.82%), Postives = 164/343 (47.81%), Query Frame = 0
Query:   91 DGDSQS-ADDSSTLHLHATRGDVTRLAPPEPPALRPNVSHTRRCRAKVNTNFERLLQVLPDPSSGIEVKHKAQVLQYAIDYYKHVSCKNRMLEMKLALRSPSEMYRWVQSVVSASPNLKETLKSFIAMICLTKNWKYAELWAPQ-TRA-------------------GSSSVSLRYVAGALP---PTVGG-------------------------------------------------EALHRLRKYRARSRKYKFPPRCGVPGRVFLTMRPEWLPLLNDPVAFPRAPHAVRNQVQVTFAVPVIVNGAVEMVVEFFDTERRDYDPATLNMANDIAAMFGKAF 360
            D DS S A  S T+   AT   V+  A         + SHTR+CRAKVNT F+ LL +LP      +VKHKAQ+L Y I  YK +  +   LE +LAL + + +  WV +VV++S  L E L+ ++ +I + K ++YAELW PQ T+A                   G S V  R +A  LP   PT G                                                       +  +R  +     PPR G+PGRV+ +MRPEWLP+L+DP AF RA +A  +++ +  AVPV++ G V  V  FFDT +R YD + + +A+D+A + G AF
Sbjct:  307 DSDSMSVAPQSGTVGTTATTSVVSTEAGVRGMRKDVHNSHTRKCRAKVNTKFDELLTLLPPHPDSFQVKHKAQILDYTIHMYKRIQARKNQLEAELALSTRANLAAWVDTVVASSRTLPEALRPYLHLIAVQKRFRYAELWLPQPTKAEGMAAAKKAGANASLSLPSGDSIVLTRSMALVLPAPVPTAGQTDELSVGLGAPTGGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEENTTRAIEAFRDATASCVVPPRVGMPGRVYCSMRPEWLPMLSDPHAFIRAEYAANSKLSMCLAVPVLLCGRVAAVAAFFDTGKRPYDASVVGLAHDVANLVGNAF 649          
BLAST of Gchil6579.t1 vs. uniprot
Match: A0A2V3IV04_9FLOR (GAF domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV04_9FLOR)

HSP 1 Score: 155 bits (392), Expect = 1.870e-39
Identity = 86/239 (35.98%), Postives = 132/239 (55.23%), Query Frame = 0
Query:  127 VSHTRRCRAKVNTNFERLLQVLPDPSSGIEVKHKAQVLQYAIDYYKHVSCKNRMLEMKLALRSPSEMYRWVQSVVSASPNLKETLKSFIAMICLTKNWKYAELWAPQTRAGS------SSVSLRYVAGALPPTVGGEALHRLRKYRARSRKYKFPPRCGVPGRVFLTMRPEWLPLLNDPVAFPRAPHAVRNQVQVTFAVPVIVNGAVEMVVEFFDTERRDYDPATLNMANDIAAMFGKA 359
            +SHT+ CR ++N+ FERL + LP   SG+EVKHKAQVL YAI   K +  +   LE++LA+ S      W+  +V          +  + +    + WK+AELW    +  S      +SV+LR+ +     T     L+ L+ +   S KY F  + GVPGRV+ +MRPEW+  L++   F R+  A ++ ++V  AVPV + G +E V+ F+DT+ R YD   L +A ++A   G A
Sbjct:  210 LSHTKMCRDRLNSMFERLKRTLPPAPSGVEVKHKAQVLDYAILVLKGMVERTTQLEIELAVSSNKATMEWISKLVDRVDTFPNAAEEVMQLFSRRRGWKHAELWTTSRKTASPEVDSDNSVTLRFCSSICSETTNERKLN-LQTFSKASEKYAFKAQHGVPGRVWSSMRPEWVTGLDNSKNFHRSSLAKKHGLKVCLAVPVTITGKIEAVMCFYDTKHRPYDTQCLELAMNLAWALGNA 447          
BLAST of Gchil6579.t1 vs. uniprot
Match: A0A1X6NUF4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUF4_PORUM)

HSP 1 Score: 86.7 bits (213), Expect = 1.020e-14
Identity = 47/103 (45.63%), Postives = 64/103 (62.14%), Query Frame = 0
Query:  262 LRKYRARSRKYKFPPRCGVPGRVFLTMRPEWLP-LLNDPVAFPRAPHAVRNQVQVTFAVPVIVNGAVEMVVEFFDTERRDYDPATLNMANDIAAMFGKAFTEK 363
            L ++   SR ++F P+ GVPGRV+ TMRPEWL  L +D   F RAP A R  ++V  AVPV V+G+V  VV F+DT  R +DPA  ++A  +    G A+  K
Sbjct:  879 LERFSIESRAWRFRPKVGVPGRVWSTMRPEWLASLADDRGTFLRAPLARRFGLRVCVAVPVTVSGSVAAVVAFYDTVARPFDPACYDLAVKLTCALGNAYGAK 981          
BLAST of Gchil6579.t1 vs. uniprot
Match: A0A1F2R4Y1_9BACT (PAS domain-containing protein n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15 TaxID=1797181 RepID=A0A1F2R4Y1_9BACT)

HSP 1 Score: 75.9 bits (185), Expect = 4.830e-12
Identity = 51/159 (32.08%), Postives = 73/159 (45.91%), Query Frame = 0
Query:  200 VVSASPNLKETLKSFIAMICLTKNWKYAELWAPQTRAGSSSVSLRYVAGALPPTVGGEALHRLRKYRARSRKYKFPPRCGVPGRVFLTMRPEWLPLLNDPVAFPRAPHAVRNQVQVTFAVPVIVNGAVEMVVEFFDTERRDYDPATLNMANDIAAMFGK 358
            V++ + +L +     +  IC T NW++A +W    R    +  LR V     P V      R  K+ A SR   F P  G+PG V+ + RP W+P +     FPRAP A        F  P+++   V  V+EFF  E R+ D A L M   I    G+
Sbjct:   27 VLATAAHLSDATPRILEAICTTLNWEHATVW----RVDRQASVLRCVEIWHQPDV------RFAKFEALSRGMTFAPGIGLPGSVWSSGRPLWIPDVVHHDNFPRAPIAAAEGPHAAFGFPIMLGPEVLGVMEFFSREIREPDEALLAMLGTIGHQIGQ 175          
BLAST of Gchil6579.t1 vs. uniprot
Match: A0A1U7ILF5_9CYAN (Uncharacterized protein n=1 Tax=Phormidium ambiguum IAM M-71 TaxID=454136 RepID=A0A1U7ILF5_9CYAN)

HSP 1 Score: 77.8 bits (190), Expect = 7.250e-12
Identity = 42/165 (25.45%), Postives = 82/165 (49.70%), Query Frame = 0
Query:  201 VSASPNLKETLKSFIAMICLTKNWKYAELWAPQTRAGSSSVSLRYVAGALPPTVGGEALHRLRKYRARSRKYKFPPRCGVPGRVFLTMRPEWLPLLNDPVA--FPRAPHAVRNQVQVTFAVPVIVNGAVEMVVEFFDTERRDYDPATLNMANDIAAMFGKAFTEK 363
            ++ S + +  ++  +  +C    W Y E W P+    +   S        P   G  +++ L  +R  S    FPP  G+PGRV+++ +PEW+P ++      FPR   A+ + ++ + A+P++V   V  V+ FF  + ++ D   +N+ + I    G++F +K
Sbjct:   24 IAQSVDFQSAIELILNRVCELTGWNYGEAWIPRLDGSALEYS--------PVWYG--SINHLELFRKFSEALTFPPNVGLPGRVWVSKKPEWIPDVSRTAKAIFPRMKIALTSGLKASLAIPILVGDYVVAVLVFFMFKSKEEDNDLINLVSSITNQIGESFEQK 178          
BLAST of Gchil6579.t1 vs. uniprot
Match: UPI001683F77F (diguanylate cyclase n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI001683F77F)

HSP 1 Score: 76.6 bits (187), Expect = 1.350e-11
Identity = 50/200 (25.00%), Postives = 91/200 (45.50%), Query Frame = 0
Query:  171 YKHVSCKNRMLEMKLALRSPSE----MYRWVQSVVSASPNLKETLKSFIAMICLTKNWKYAELWAPQTRAGSSSVSLRYVAGALPPTVGGEAL-HRLRKYRARSRKYKFPPRCGVPGRVFLTMRPEWLP--LLNDPVAFPRAPHAVRNQVQVTFAVPVIVNGAVEMVVEFFDTERRDYDPATLNMANDIAAMFGKAFTEK 363
            Y  ++ +N +L+ ++  R  +E    +   +   +S S +L   L+  +  +C T +W + E W P               G L  + G  A    L+++R  S K  F P  G+PGRV+++ +PEW+    L     F R+  A+   ++    VP++++  V  V+ FF TE+R  +   + + N +A   G     K
Sbjct:  134 YNQLATQNAVLQQQIQERQRAEAETNLLLQITQAISKSSDLDSALEVTLQQVCETISWNFGEAWIPNDD------------GFLECSCGWYATTESLQEFRYYSEKLTFTPHTGLPGRVWMSQKPEWIENVSLEQNQLFLRSDIALEAGLKTALGVPLVLDDQVLAVLVFFKTEQRKPEERLIELVNAVATQLGSLIQRK 321          
The following BLAST results are available for this feature:
BLAST of Gchil6579.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J090_9FLOR6.240e-14357.96BHLH domain-containing protein n=1 Tax=Gracilariop... [more]
R7QJ09_CHOCR1.090e-5038.55BHLH domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A2V3ILC3_9FLOR5.020e-4936.92BHLH domain-containing protein n=2 Tax=Gracilariop... [more]
A0A7S1TET1_9RHOD2.190e-4637.70Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6PIG4_PORUM6.240e-4633.82BHLH domain-containing protein n=1 Tax=Porphyra um... [more]
A0A2V3IV04_9FLOR1.870e-3935.98GAF domain-containing protein n=1 Tax=Gracilariops... [more]
A0A1X6NUF4_PORUM1.020e-1445.63Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1F2R4Y1_9BACT4.830e-1232.08PAS domain-containing protein n=1 Tax=Acidobacteri... [more]
A0A1U7ILF5_9CYAN7.250e-1225.45Uncharacterized protein n=1 Tax=Phormidium ambiguu... [more]
UPI001683F77F1.350e-1125.00diguanylate cyclase n=1 Tax=Microcoleus sp. FACHB-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 128..195
e-value: 1.9E-5
score: 26.7
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 130..187
IPR029016GAF-like domain superfamilyGENE3D3.30.450.40coord: 196..364
e-value: 3.3E-9
score: 38.7
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 121..174
score: 8.905157
NoneNo IPR availableSUPERFAMILY55781GAF domain-likecoord: 270..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:686834..687955 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6579.t1Gchil6579.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 686834..687955 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6579.t1 ID=Gchil6579.t1|Name=Gchil6579.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=374bp
MESNTALVSPLPPDFALLDDALLLAHQNSLPPSDTRASDFDLSLPLHDGS
ALFVIPQKFNPHSFFVPSLSATDGIHSDFSPERLFSLTSADGDSQSADDS
STLHLHATRGDVTRLAPPEPPALRPNVSHTRRCRAKVNTNFERLLQVLPD
PSSGIEVKHKAQVLQYAIDYYKHVSCKNRMLEMKLALRSPSEMYRWVQSV
VSASPNLKETLKSFIAMICLTKNWKYAELWAPQTRAGSSSVSLRYVAGAL
PPTVGGEALHRLRKYRARSRKYKFPPRCGVPGRVFLTMRPEWLPLLNDPV
AFPRAPHAVRNQVQVTFAVPVIVNGAVEMVVEFFDTERRDYDPATLNMAN
DIAAMFGKAFTEKDTSRCASQFW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036638HLH_DNA-bd_sf
IPR029016GAF-like_dom_sf
IPR011598bHLH_dom