Gchil6508.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A2V3IMI2_9FLOR (Ribosomal large subunit pseudouridine synthase C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI2_9FLOR) HSP 1 Score: 491 bits (1263), Expect = 1.410e-171 Identity = 242/354 (68.36%), Postives = 290/354 (81.92%), Query Frame = 0
Query: 9 THGAMRALVRRAFSSKPIQSSPNISSSQSFELPFAKQPARFKVSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTGRYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIGGKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDNADDNQHPVEAGALQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQESFAS 362
T + +L+ R FS+ + + SS+ S LP A QPARF+VS L RLDRFIK APGLPPGLIHRHIRQ+RV INGR+ER R TPVR DVI+FPG VKLGL+RRKKRP PDD+SLSEAM V+ WLL+RDAR AVLNKPPGLPV++ + TSRTLEQLLC LG+GRYWLVHRLQTQVGGA+LVARDVGAATLL+D+FR R+VTRLYWGLV+GVPR+KKG++++DI G+KA+T+YRVVQM+D+HY+WLE EPRTGRSNQLS HCAEGLGTPL+GD + + D QHP+ GALQLCSR++TFPRLTQ + S +K + DL++V +PLP HMKDTW+RLGLQE FAS
Sbjct: 5 TLSRISSLLPRPFSTSA-RGASGPSSASSNGLPCATQPARFRVSLALDRVRLDRFIKHSAPGLPPGLIHRHIRQSRVLINGRVERSRATPVRTEDVITFPGHVKLGLTRRKKRPPPDDVSLSEAMLVRGWLLHRDARTAVLNKPPGLPVIAHSQENTSRTLEQLLCALGSGRYWLVHRLQTQVGGAVLVARDVGAATLLADYFRTRMVTRLYWGLVAGVPRHKKGIIDIDISGQKAITKYRVVQMVDSHYAWLEFEPRTGRSNQLSAHCAEGLGTPLVGDTIYPHQQDRQHPI-TGALQLCSRSITFPRLTQNSASRSRKGTRTASDLITVHAPLPLHMKDTWKRLGLQERFAS 356
BLAST of Gchil6508.t1 vs. uniprot
Match: R7QAD7_CHOCR (S4 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAD7_CHOCR) HSP 1 Score: 322 bits (824), Expect = 2.020e-104 Identity = 166/331 (50.15%), Postives = 219/331 (66.16%), Query Frame = 0
Query: 48 RFKVSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTGRYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIGGKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNF----------DNADDNQHPVEAGALQLCSRTLTFPRLTQ-INPSIRQKRRCRSPD-----LVSVKSPLPPHMKDTWRRLGLQESFAS 362
+++V+ GSRLDRFIK RAPG+PPGLI R IR+ + + R PVR DV++FPG +KLGLSR K++P PDDISL+E+ VK W+L+RDAR VLNKP GLP T R LE LL G+G GRYWLVHRL +VGGAI+VARDVGAA LL++ FR R+V + YW LV G ++K G +++ I GK+A T YRV+Q +D + WLEL PRTGR +QL IHCA+GLGTP++GD + N D + L L SR + FP+LTQ ++ ++ +R D ++ ++PLPPHMKDTW+R GL+E FA+
Sbjct: 70 KWEVTAVDDGSRLDRFIKRRAPGVPPGLIQRLIRKRSIMVQSIPAIRNAHPVRTGDVVTFPGHIKLGLSRGKRKPQPDDISLAESAIVKHWVLHRDARCVVLNKPAGLPTQGGSSVGT-RHLEALLPGIGEGRYWLVHRLDKEVGGAIVVARDVGAAGLLAEHFRGRLVRKTYWALVEGSVKDKTGFIDLPIDGKRARTDYRVIQSLDKKFVWLELSPRTGRKHQLRIHCADGLGTPIVGDGKYGHGGPEGLDGQNVDGGLLSLMNPGLHLFSREIQFPKLTQHMSGGGKRSKRTAGSDGTGFPTITARAPLPPHMKDTWKRFGLEEHFAA 399
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A1M3GY54_9PROT (Pseudouridine synthase n=1 Tax=Alphaproteobacteria bacterium 41-28 TaxID=1895706 RepID=A0A1M3GY54_9PROT) HSP 1 Score: 165 bits (417), Expect = 1.560e-44 Identity = 105/325 (32.31%), Postives = 167/325 (51.38%), Query Frame = 0
Query: 50 KVSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLL-CGLGTGRYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIG----------------GKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDNADDNQHPVEAGALQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQ 357
KVS + SG RLDR ++ P LP GLI + R+ ++I G + + T V E +SFP L L ++ D +S +E +K +LY D+ + +LNKP G+ V S G + ++L+ +L + LVHRL G ++ A+ + A LS F+ R V ++YW LV GVP K+GV+++ + G +A T YRV++ + N +WLEL P+TGR++QL +HCAE L TP++GD + + P +L L +R L P ++ ++PLP +K+T++ LG +
Sbjct: 13 KVSAEESGIRLDRCLRLSIPHLPQGLIEKAARKGILRIEGS-KAKPSTRVEEGQTLSFPKSF-LSLETDVQKKKRDALSHAERKWLKGLILYEDSDIIILNKPAGIAVQS--GTKQRKSLDAMLEVYYEDCKPRLVHRLDMDTSGVMVFAKTLPMARWLSQAFKERTVQKIYWALVCGVPAKKEGVISLSLSKKPDSLGEKVRVDQEEGVRAKTYYRVIEALGNRIAWLELTPKTGRTHQLRVHCAEALKTPILGDGKYGGKE--AFPFGRKSLHLHARALVLP--------------LPKGKTMTFEAPLPKELKETFKELGFE 317
BLAST of Gchil6508.t1 vs. uniprot
Match: M2X6B1_GALSU (Ribosomal large subunit pseudouridine synthase C n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X6B1_GALSU) HSP 1 Score: 163 bits (413), Expect = 1.560e-43 Identity = 107/323 (33.13%), Postives = 166/323 (51.39%), Query Frame = 0
Query: 58 SRLDRFIKSRAPG-LPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSR------RKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTGRYW---LVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIGGKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNF--DNADDNQHPVEAGALQ----------LCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQE 358
+RLDRF++ + G LP + + IR+ ++I+G+ R G VR + ++ P +++ ++RP +S V+ W+LY+D + V+NKPP L G S L LL L LVHRL +V G +L+AR+ AA L+ F+ R V +LYW LV G P +G + + GK A+TRYRVV+ + + +WLELEP TGR QL +HCA+ L P+ GD F D ++N H V L L + +++FP + ++ + + +V +PLP HM++TW LG +
Sbjct: 48 TRLDRFLRRQLGGRLPQSFLEKCIRRGFIKIDGQTVTRAGERVRSSSILCVPKQLESFREADGDGTVERQRPV---LSQLVKERVQNWVLYKDTNLMVINKPPLLACQGGSGLRDSH-LGTLLPALSLDNEEPPKLVHRLDKEVSGTLLLARNSVAAKNLALLFQQRQVKKLYWALVIGNPLPTQGEIRKAVDGKTAITRYRVVEKLHSVAAWLELEPITGRKRQLRLHCAQVLNCPIFGDEKFPFDRLEENTHLVAYQGLSHLLRRPKGIHLHAYSISFPNIETLDKPQKTWK--------TVTAPLPLHMENTWNTLGFHK 358
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A1Z9J471_9PROT (Pseudouridine synthase n=1 Tax=Rhodospirillaceae bacterium TMED167 TaxID=1986863 RepID=A0A1Z9J471_9PROT) HSP 1 Score: 160 bits (406), Expect = 8.460e-43 Identity = 109/332 (32.83%), Postives = 169/332 (50.90%), Query Frame = 0
Query: 51 VSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDI----SLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTG---RYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNM---------------DIGGKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDN--ADDNQHPVEAGALQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQE 358
V D G RLDR++K R PGL G + + +R +++++G G + +IS L+ P+ D S ++ + ++ +L++D V V++KP GL V + G +T+R L+ +L L G R LVHRL G +++AR AA LL++ FR++ ++YW +V+GVPR G +N+ D GK A++ YRV++ +WL LEP TGR++QL +HCA LGTP++GD + A A L L +R + P NPS ++ V +PLP HMK TW+ LG +E
Sbjct: 9 VEEDAEGMRLDRWVKKRFPGLSQGRLEKLLRTGQIRLDG------GRAKSNSRLISGQSVRMPPLNADTANPSADRAPARASKADKLMLESAILHQDHHVLVIDKPAGLAV--QGGSKTTRHLDGMLDALTLGAAERPRLVHRLDKDTSGVLVLARTAKAARLLTEAFRSKDSRKVYWAIVTGVPRPAMGRINLGLDKRPGRGGEKVVADADGKPAISDYRVIEHAGRSAAWLSLEPVTGRTHQLRVHCA-ALGTPILGDGKYGGKAAFIEGSDKAARQLHLHARAIRIP-----NPS---------GGMLVVSAPLPDHMKKTWKLLGFEE 317
BLAST of Gchil6508.t1 vs. uniprot
Match: UPI00174D6823 (RluA family pseudouridine synthase n=1 Tax=Kordiimonas sediminis TaxID=1735581 RepID=UPI00174D6823) HSP 1 Score: 159 bits (402), Expect = 3.110e-42 Identity = 105/327 (32.11%), Postives = 167/327 (51.07%), Query Frame = 0
Query: 51 VSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGL---GTGRYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIG---------------GKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDNADDNQHPVEAGALQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQES 359
V PD G+RLDR+ K P + G + + +R+ V+++G+ + + + P + G + + ++P +S +E EV+ W+L+ D V VLNKP GLP ++ G SR L+ LL L R LVHRL GA+L+AR+ AA L+ F ++ + YW +V GVP+ + G ++M + GKK+VT + VV+ + + +WL L+P TGR++QL +HCAE +GTP++GD + A+ + L L S + FP + + V +PLPPHM ++ LGL S
Sbjct: 9 VQPDDDGTRLDRWFKRHFPDVSFGRLQKAMRKGEVRLDGKRVKGKEHVATGQTIRIPPLDSIAGAAPKAEKPVRKRLSDAEVQEVRNWVLHIDDDVIVLNKPAGLP--TQGGTGQSRHLDGLLDALRYDAPQRPKLVHRLDKDTSGALLLARNSQAAAKLAKGFASKDTQKTYWAIVKGVPQQQDGRISMLMEKAPIKGNERMIASDTGKKSVTDFSVVERMGHEAAWLALQPLTGRTHQLRLHCAE-MGTPIVGDGKYGGAEAYLSGAISKKLHLHSYRVQFPH--------------PAGGICDVSAPLPPHMAASFDMLGLDLS 318
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A8J2ZBU1_9PROT (Pseudouridine synthase n=2 Tax=Caldovatus sediminis TaxID=2041189 RepID=A0A8J2ZBU1_9PROT) HSP 1 Score: 159 bits (401), Expect = 6.250e-42 Identity = 106/323 (32.82%), Postives = 158/323 (48.92%), Query Frame = 0
Query: 51 VSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTG---RYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDI---------------GGKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDNADDNQHPVEAGALQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLG 355
V+P+ + RLDR+ + P L G + + +R +V+++GR T +R I P + G +R P +S +A +++ +LYRD V LNKP GL V PG +R L+ +L L G R LVHRL G +L+AR AA+ L+ FR R + YW +V G P + G +++ + GG +A+T YRV+ +WLEL P TGR++QL +HCA GLGTP++GD + A + L L +R L P ++ V +PLPPHM+ T+ LG
Sbjct: 26 VAPEEADIRLDRWFRRHFPRLTQGALQKMLRTGQVRVDGR-RAEASTRLRPGQQIRIP-PLPEGPPTEAQRGAPRPVSPEDARLLERMVLYRDDSVIALNKPYGLAVQGGPG--LTRHLDAMLGALRFGHAERPRLVHRLDRDTSGVLLLARGAAAASKLAAAFRGRDAEKTYWAVVVGRPSPESGRIDLPLAKQPGPRGERTTPAEGGTRAITDYRVLDAAQRRAAWLELRPLTGRTHQLRVHCARGLGTPILGDGKYGGAAAQIEGLPP-LLHLHARALRLPH--------------PEGGMLEVAAPLPPHMEQTFAFLG 329
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A843RKL5_9PROT (Pseudouridine synthase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RKL5_9PROT) HSP 1 Score: 158 bits (400), Expect = 1.180e-41 Identity = 106/328 (32.32%), Postives = 160/328 (48.78%), Query Frame = 0
Query: 56 SGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTG---RYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNM----------------DIGGKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDNADDNQHPVEAGA-----LQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQES 359
SG RLDR+ K P L G + + +R+ ++++GR + + E V+ P + + R P +S EA ++ +LYRDA + L+KP GL V G+ R L+ +L L G R LVHRL G +L+AR+ A L+ FR + ++YW LV+GVP ++GV+++ D GK A T ++VV+ SWL L P TGR++QL +HCA +GTP++GD + + + A L L +R L P +P + R V +PLPPHM TW+ LG E+
Sbjct: 19 SGQRLDRWFKQHYPQLTHGRLEKMLRKGEIRVDGR-RVKASERLEEGQVVRVPPIPETAPAERPAAPAALAVSAKEAAALQAAVLYRDANIIALDKPAGLAVQGGSGQR--RHLDGMLEALRFGAEERPRLVHRLDRDTAGVLLLARNAPTARALTAAFRGKETQKIYWALVAGVPAERRGVIDLPLAKQAQSRGEAMAADDDAGKPARTFFQVVESYRRAASWLVLLPLTGRTHQLRVHCA-AMGTPIVGDGKYGGREAFPAALAKAAPAAKTLHLLARELALP-----DPEVGTTLR--------VTAPLPPHMAATWKALGFNEA 329
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A4R3J801_9PROT (Pseudouridine synthase n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3J801_9PROT) HSP 1 Score: 157 bits (398), Expect = 1.390e-41 Identity = 103/336 (30.65%), Postives = 168/336 (50.00%), Query Frame = 0
Query: 51 VSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFP----GEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGL--GTGRYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIG----------------GKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDNADDNQHPVEAGA-LQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQESFASA 363
V D + RLDR++K R G+ G I + +R +++++G+ + G ++ + P GE +G S R T + + ++ +LY+D ++ VLNKP GL V + G T ++ +L GL G R L HRL G +++AR G A L+ FR R V +LYW +V GVP +G++++ +G G+KA + YR++ +W+ +EP TGR++QL +H A+G+GTP++GD + + G L L +R++ F R SP + + +PLP HM+ TWR LG +E A
Sbjct: 9 VDADDADVRLDRWLKRRFTGITQGRIQKLLRTGQIRVDGKRLKDAGFRLQAGQTVRVPPLSAGEKGVGPSVRPS--TAREPHAEDVQALRDCVLYKDDKIIVLNKPAGLAV--QGGTGTVLHVDAMLDGLRFGADRPRLTHRLDKDTSGVLVLARTQGEAARLTALFRERKVHKLYWAIVVGVPSPDQGMIDLALGKIPGKGGEKVVPEASRGRKAQSLYRIIDRAGRKAAWVAMEPLTGRTHQLRVHMAQGVGTPILGDGKYGGQGAFLEGLAGGRKLHLHARSIAFARSDG------------SP--LRISAPLPEHMRATWRFLGFEEGHEGA 326
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A7C7PJE5_9PROT (Pseudouridine synthase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7PJE5_9PROT) HSP 1 Score: 156 bits (395), Expect = 5.050e-41 Identity = 102/325 (31.38%), Postives = 161/325 (49.54%), Query Frame = 0
Query: 51 VSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTG---RYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIG----------------GKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDN-ADDNQHPVEAGALQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLG 355
+ + +G RLDR+ + R P + G + + +R+ V+++G+ R + + ++ P +R P +S +EA E+K +LY D V +KP GL V + G SR L+ +L L G R LVHRL G +L+AR +A L+ FRA+ ++YW L+SGVPR K+G++++ + GK A T +R+VQ + +W+ L P TGR++QL +HCA LGTP++GD + A P L L +R L P + ++R V + LPPHM ++W LG
Sbjct: 9 IEAEEAGQRLDRWFRQRFPQVTQGRLEKWLRKGEVRLDGK-RARSASRIEAGQIVRIPPLPAADSARPPSSPKRQKLSAAEAAELKARVLYSDDTVIAFDKPAGLAV--QGGSGQSRHLDGMLEALKLGAAERPRLVHRLDKDTAGVLLLARTAASARDLTAAFRAKTTQKIYWALLSGVPRQKRGLIDLPLAKRQTGAGEAMAPAEEEGKPAQTLFRIVQTYKDRLAWVVLMPLTGRTHQLRVHCA-ALGTPIVGDGKYGGRAAFPDKPGLPKTLHLLARELALPH-PEDGTTLR------------VVAALPPHMAESWEVLG 316 The following BLAST results are available for this feature:
BLAST of Gchil6508.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil6508.t1 ID=Gchil6508.t1|Name=Gchil6508.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=366bpback to top |