Gchil6508.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6508.t1
Unique NameGchil6508.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length366
Homology
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A2V3IMI2_9FLOR (Ribosomal large subunit pseudouridine synthase C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI2_9FLOR)

HSP 1 Score: 491 bits (1263), Expect = 1.410e-171
Identity = 242/354 (68.36%), Postives = 290/354 (81.92%), Query Frame = 0
Query:    9 THGAMRALVRRAFSSKPIQSSPNISSSQSFELPFAKQPARFKVSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTGRYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIGGKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDNADDNQHPVEAGALQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQESFAS 362
            T   + +L+ R FS+   + +   SS+ S  LP A QPARF+VS  L   RLDRFIK  APGLPPGLIHRHIRQ+RV INGR+ER R TPVR  DVI+FPG VKLGL+RRKKRP PDD+SLSEAM V+ WLL+RDAR AVLNKPPGLPV++   + TSRTLEQLLC LG+GRYWLVHRLQTQVGGA+LVARDVGAATLL+D+FR R+VTRLYWGLV+GVPR+KKG++++DI G+KA+T+YRVVQM+D+HY+WLE EPRTGRSNQLS HCAEGLGTPL+GD  + +  D QHP+  GALQLCSR++TFPRLTQ + S  +K    + DL++V +PLP HMKDTW+RLGLQE FAS
Sbjct:    5 TLSRISSLLPRPFSTSA-RGASGPSSASSNGLPCATQPARFRVSLALDRVRLDRFIKHSAPGLPPGLIHRHIRQSRVLINGRVERSRATPVRTEDVITFPGHVKLGLTRRKKRPPPDDVSLSEAMLVRGWLLHRDARTAVLNKPPGLPVIAHSQENTSRTLEQLLCALGSGRYWLVHRLQTQVGGAVLVARDVGAATLLADYFRTRMVTRLYWGLVAGVPRHKKGIIDIDISGQKAITKYRVVQMVDSHYAWLEFEPRTGRSNQLSAHCAEGLGTPLVGDTIYPHQQDRQHPI-TGALQLCSRSITFPRLTQNSASRSRKGTRTASDLITVHAPLPLHMKDTWKRLGLQERFAS 356          
BLAST of Gchil6508.t1 vs. uniprot
Match: R7QAD7_CHOCR (S4 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAD7_CHOCR)

HSP 1 Score: 322 bits (824), Expect = 2.020e-104
Identity = 166/331 (50.15%), Postives = 219/331 (66.16%), Query Frame = 0
Query:   48 RFKVSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTGRYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIGGKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNF----------DNADDNQHPVEAGALQLCSRTLTFPRLTQ-INPSIRQKRRCRSPD-----LVSVKSPLPPHMKDTWRRLGLQESFAS 362
            +++V+    GSRLDRFIK RAPG+PPGLI R IR+  + +      R   PVR  DV++FPG +KLGLSR K++P PDDISL+E+  VK W+L+RDAR  VLNKP GLP        T R LE LL G+G GRYWLVHRL  +VGGAI+VARDVGAA LL++ FR R+V + YW LV G  ++K G +++ I GK+A T YRV+Q +D  + WLEL PRTGR +QL IHCA+GLGTP++GD  +           N D     +    L L SR + FP+LTQ ++   ++ +R    D      ++ ++PLPPHMKDTW+R GL+E FA+
Sbjct:   70 KWEVTAVDDGSRLDRFIKRRAPGVPPGLIQRLIRKRSIMVQSIPAIRNAHPVRTGDVVTFPGHIKLGLSRGKRKPQPDDISLAESAIVKHWVLHRDARCVVLNKPAGLPTQGGSSVGT-RHLEALLPGIGEGRYWLVHRLDKEVGGAIVVARDVGAAGLLAEHFRGRLVRKTYWALVEGSVKDKTGFIDLPIDGKRARTDYRVIQSLDKKFVWLELSPRTGRKHQLRIHCADGLGTPIVGDGKYGHGGPEGLDGQNVDGGLLSLMNPGLHLFSREIQFPKLTQHMSGGGKRSKRTAGSDGTGFPTITARAPLPPHMKDTWKRFGLEEHFAA 399          
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A1M3GY54_9PROT (Pseudouridine synthase n=1 Tax=Alphaproteobacteria bacterium 41-28 TaxID=1895706 RepID=A0A1M3GY54_9PROT)

HSP 1 Score: 165 bits (417), Expect = 1.560e-44
Identity = 105/325 (32.31%), Postives = 167/325 (51.38%), Query Frame = 0
Query:   50 KVSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLL-CGLGTGRYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIG----------------GKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDNADDNQHPVEAGALQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQ 357
            KVS + SG RLDR ++   P LP GLI +  R+  ++I G  + +  T V E   +SFP    L L    ++   D +S +E   +K  +LY D+ + +LNKP G+ V S  G +  ++L+ +L       +  LVHRL     G ++ A+ +  A  LS  F+ R V ++YW LV GVP  K+GV+++ +                 G +A T YRV++ + N  +WLEL P+TGR++QL +HCAE L TP++GD  +   +    P    +L L +R L  P                    ++ ++PLP  +K+T++ LG +
Sbjct:   13 KVSAEESGIRLDRCLRLSIPHLPQGLIEKAARKGILRIEGS-KAKPSTRVEEGQTLSFPKSF-LSLETDVQKKKRDALSHAERKWLKGLILYEDSDIIILNKPAGIAVQS--GTKQRKSLDAMLEVYYEDCKPRLVHRLDMDTSGVMVFAKTLPMARWLSQAFKERTVQKIYWALVCGVPAKKEGVISLSLSKKPDSLGEKVRVDQEEGVRAKTYYRVIEALGNRIAWLELTPKTGRTHQLRVHCAEALKTPILGDGKYGGKE--AFPFGRKSLHLHARALVLP--------------LPKGKTMTFEAPLPKELKETFKELGFE 317          
BLAST of Gchil6508.t1 vs. uniprot
Match: M2X6B1_GALSU (Ribosomal large subunit pseudouridine synthase C n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X6B1_GALSU)

HSP 1 Score: 163 bits (413), Expect = 1.560e-43
Identity = 107/323 (33.13%), Postives = 166/323 (51.39%), Query Frame = 0
Query:   58 SRLDRFIKSRAPG-LPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSR------RKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTGRYW---LVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIGGKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNF--DNADDNQHPVEAGALQ----------LCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQE 358
            +RLDRF++ +  G LP   + + IR+  ++I+G+   R G  VR + ++  P +++            ++RP    +S      V+ W+LY+D  + V+NKPP L      G   S  L  LL  L         LVHRL  +V G +L+AR+  AA  L+  F+ R V +LYW LV G P   +G +   + GK A+TRYRVV+ + +  +WLELEP TGR  QL +HCA+ L  P+ GD  F  D  ++N H V    L           L + +++FP +  ++   +  +        +V +PLP HM++TW  LG  +
Sbjct:   48 TRLDRFLRRQLGGRLPQSFLEKCIRRGFIKIDGQTVTRAGERVRSSSILCVPKQLESFREADGDGTVERQRPV---LSQLVKERVQNWVLYKDTNLMVINKPPLLACQGGSGLRDSH-LGTLLPALSLDNEEPPKLVHRLDKEVSGTLLLARNSVAAKNLALLFQQRQVKKLYWALVIGNPLPTQGEIRKAVDGKTAITRYRVVEKLHSVAAWLELEPITGRKRQLRLHCAQVLNCPIFGDEKFPFDRLEENTHLVAYQGLSHLLRRPKGIHLHAYSISFPNIETLDKPQKTWK--------TVTAPLPLHMENTWNTLGFHK 358          
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A1Z9J471_9PROT (Pseudouridine synthase n=1 Tax=Rhodospirillaceae bacterium TMED167 TaxID=1986863 RepID=A0A1Z9J471_9PROT)

HSP 1 Score: 160 bits (406), Expect = 8.460e-43
Identity = 109/332 (32.83%), Postives = 169/332 (50.90%), Query Frame = 0
Query:   51 VSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDI----SLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTG---RYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNM---------------DIGGKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDN--ADDNQHPVEAGALQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQE 358
            V  D  G RLDR++K R PGL  G + + +R  +++++G      G     + +IS        L+     P+ D      S ++ + ++  +L++D  V V++KP GL V  + G +T+R L+ +L  L  G   R  LVHRL     G +++AR   AA LL++ FR++   ++YW +V+GVPR   G +N+               D  GK A++ YRV++      +WL LEP TGR++QL +HCA  LGTP++GD  +    A        A  L L +R +  P     NPS           ++ V +PLP HMK TW+ LG +E
Sbjct:    9 VEEDAEGMRLDRWVKKRFPGLSQGRLEKLLRTGQIRLDG------GRAKSNSRLISGQSVRMPPLNADTANPSADRAPARASKADKLMLESAILHQDHHVLVIDKPAGLAV--QGGSKTTRHLDGMLDALTLGAAERPRLVHRLDKDTSGVLVLARTAKAARLLTEAFRSKDSRKVYWAIVTGVPRPAMGRINLGLDKRPGRGGEKVVADADGKPAISDYRVIEHAGRSAAWLSLEPVTGRTHQLRVHCA-ALGTPILGDGKYGGKAAFIEGSDKAARQLHLHARAIRIP-----NPS---------GGMLVVSAPLPDHMKKTWKLLGFEE 317          
BLAST of Gchil6508.t1 vs. uniprot
Match: UPI00174D6823 (RluA family pseudouridine synthase n=1 Tax=Kordiimonas sediminis TaxID=1735581 RepID=UPI00174D6823)

HSP 1 Score: 159 bits (402), Expect = 3.110e-42
Identity = 105/327 (32.11%), Postives = 167/327 (51.07%), Query Frame = 0
Query:   51 VSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGL---GTGRYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIG---------------GKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDNADDNQHPVEAGALQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQES 359
            V PD  G+RLDR+ K   P +  G + + +R+  V+++G+  + +        +   P +   G + + ++P    +S +E  EV+ W+L+ D  V VLNKP GLP  ++ G   SR L+ LL  L      R  LVHRL     GA+L+AR+  AA  L+  F ++   + YW +V GVP+ + G ++M +                GKK+VT + VV+ + +  +WL L+P TGR++QL +HCAE +GTP++GD  +  A+       +  L L S  + FP                +  +  V +PLPPHM  ++  LGL  S
Sbjct:    9 VQPDDDGTRLDRWFKRHFPDVSFGRLQKAMRKGEVRLDGKRVKGKEHVATGQTIRIPPLDSIAGAAPKAEKPVRKRLSDAEVQEVRNWVLHIDDDVIVLNKPAGLP--TQGGTGQSRHLDGLLDALRYDAPQRPKLVHRLDKDTSGALLLARNSQAAAKLAKGFASKDTQKTYWAIVKGVPQQQDGRISMLMEKAPIKGNERMIASDTGKKSVTDFSVVERMGHEAAWLALQPLTGRTHQLRLHCAE-MGTPIVGDGKYGGAEAYLSGAISKKLHLHSYRVQFPH--------------PAGGICDVSAPLPPHMAASFDMLGLDLS 318          
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A8J2ZBU1_9PROT (Pseudouridine synthase n=2 Tax=Caldovatus sediminis TaxID=2041189 RepID=A0A8J2ZBU1_9PROT)

HSP 1 Score: 159 bits (401), Expect = 6.250e-42
Identity = 106/323 (32.82%), Postives = 158/323 (48.92%), Query Frame = 0
Query:   51 VSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTG---RYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDI---------------GGKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDNADDNQHPVEAGALQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLG 355
            V+P+ +  RLDR+ +   P L  G + + +R  +V+++GR      T +R    I  P  +  G     +R  P  +S  +A  +++ +LYRD  V  LNKP GL V   PG   +R L+ +L  L  G   R  LVHRL     G +L+AR   AA+ L+  FR R   + YW +V G P  + G +++ +               GG +A+T YRV+       +WLEL P TGR++QL +HCA GLGTP++GD  +  A      +    L L +R L  P                   ++ V +PLPPHM+ T+  LG
Sbjct:   26 VAPEEADIRLDRWFRRHFPRLTQGALQKMLRTGQVRVDGR-RAEASTRLRPGQQIRIP-PLPEGPPTEAQRGAPRPVSPEDARLLERMVLYRDDSVIALNKPYGLAVQGGPG--LTRHLDAMLGALRFGHAERPRLVHRLDRDTSGVLLLARGAAAASKLAAAFRGRDAEKTYWAVVVGRPSPESGRIDLPLAKQPGPRGERTTPAEGGTRAITDYRVLDAAQRRAAWLELRPLTGRTHQLRVHCARGLGTPILGDGKYGGAAAQIEGLPP-LLHLHARALRLPH--------------PEGGMLEVAAPLPPHMEQTFAFLG 329          
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A843RKL5_9PROT (Pseudouridine synthase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RKL5_9PROT)

HSP 1 Score: 158 bits (400), Expect = 1.180e-41
Identity = 106/328 (32.32%), Postives = 160/328 (48.78%), Query Frame = 0
Query:   56 SGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTG---RYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNM----------------DIGGKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDNADDNQHPVEAGA-----LQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQES 359
            SG RLDR+ K   P L  G + + +R+  ++++GR   +    + E  V+  P   +   + R   P    +S  EA  ++  +LYRDA +  L+KP GL V    G+   R L+ +L  L  G   R  LVHRL     G +L+AR+   A  L+  FR +   ++YW LV+GVP  ++GV+++                D  GK A T ++VV+      SWL L P TGR++QL +HCA  +GTP++GD  +   +     +   A     L L +R L  P     +P +    R        V +PLPPHM  TW+ LG  E+
Sbjct:   19 SGQRLDRWFKQHYPQLTHGRLEKMLRKGEIRVDGR-RVKASERLEEGQVVRVPPIPETAPAERPAAPAALAVSAKEAAALQAAVLYRDANIIALDKPAGLAVQGGSGQR--RHLDGMLEALRFGAEERPRLVHRLDRDTAGVLLLARNAPTARALTAAFRGKETQKIYWALVAGVPAERRGVIDLPLAKQAQSRGEAMAADDDAGKPARTFFQVVESYRRAASWLVLLPLTGRTHQLRVHCA-AMGTPIVGDGKYGGREAFPAALAKAAPAAKTLHLLARELALP-----DPEVGTTLR--------VTAPLPPHMAATWKALGFNEA 329          
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A4R3J801_9PROT (Pseudouridine synthase n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3J801_9PROT)

HSP 1 Score: 157 bits (398), Expect = 1.390e-41
Identity = 103/336 (30.65%), Postives = 168/336 (50.00%), Query Frame = 0
Query:   51 VSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFP----GEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGL--GTGRYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIG----------------GKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDNADDNQHPVEAGA-LQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLGLQESFASA 363
            V  D +  RLDR++K R  G+  G I + +R  +++++G+  +  G  ++    +  P    GE  +G S R    T  +    +   ++  +LY+D ++ VLNKP GL V  + G  T   ++ +L GL  G  R  L HRL     G +++AR  G A  L+  FR R V +LYW +V GVP   +G++++ +G                G+KA + YR++       +W+ +EP TGR++QL +H A+G+GTP++GD  +         +  G  L L +R++ F R               SP  + + +PLP HM+ TWR LG +E    A
Sbjct:    9 VDADDADVRLDRWLKRRFTGITQGRIQKLLRTGQIRVDGKRLKDAGFRLQAGQTVRVPPLSAGEKGVGPSVRPS--TAREPHAEDVQALRDCVLYKDDKIIVLNKPAGLAV--QGGTGTVLHVDAMLDGLRFGADRPRLTHRLDKDTSGVLVLARTQGEAARLTALFRERKVHKLYWAIVVGVPSPDQGMIDLALGKIPGKGGEKVVPEASRGRKAQSLYRIIDRAGRKAAWVAMEPLTGRTHQLRVHMAQGVGTPILGDGKYGGQGAFLEGLAGGRKLHLHARSIAFARSDG------------SP--LRISAPLPEHMRATWRFLGFEEGHEGA 326          
BLAST of Gchil6508.t1 vs. uniprot
Match: A0A7C7PJE5_9PROT (Pseudouridine synthase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7PJE5_9PROT)

HSP 1 Score: 156 bits (395), Expect = 5.050e-41
Identity = 102/325 (31.38%), Postives = 161/325 (49.54%), Query Frame = 0
Query:   51 VSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVRENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLNKPPGLPVLSEPGKETSRTLEQLLCGLGTG---RYWLVHRLQTQVGGAILVARDVGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIG----------------GKKAVTRYRVVQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDN-ADDNQHPVEAGALQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDTWRRLG 355
            +  + +G RLDR+ + R P +  G + + +R+  V+++G+   R  + +    ++  P       +R    P    +S +EA E+K  +LY D  V   +KP GL V  + G   SR L+ +L  L  G   R  LVHRL     G +L+AR   +A  L+  FRA+   ++YW L+SGVPR K+G++++ +                 GK A T +R+VQ   +  +W+ L P TGR++QL +HCA  LGTP++GD  +   A     P     L L +R L  P   +   ++R            V + LPPHM ++W  LG
Sbjct:    9 IEAEEAGQRLDRWFRQRFPQVTQGRLEKWLRKGEVRLDGK-RARSASRIEAGQIVRIPPLPAADSARPPSSPKRQKLSAAEAAELKARVLYSDDTVIAFDKPAGLAV--QGGSGQSRHLDGMLEALKLGAAERPRLVHRLDKDTAGVLLLARTAASARDLTAAFRAKTTQKIYWALLSGVPRQKRGLIDLPLAKRQTGAGEAMAPAEEEGKPAQTLFRIVQTYKDRLAWVVLMPLTGRTHQLRVHCA-ALGTPIVGDGKYGGRAAFPDKPGLPKTLHLLARELALPH-PEDGTTLR------------VVAALPPHMAESWEVLG 316          
The following BLAST results are available for this feature:
BLAST of Gchil6508.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMI2_9FLOR1.410e-17168.36Ribosomal large subunit pseudouridine synthase C n... [more]
R7QAD7_CHOCR2.020e-10450.15S4 domain-containing protein n=1 Tax=Chondrus cris... [more]
A0A1M3GY54_9PROT1.560e-4432.31Pseudouridine synthase n=1 Tax=Alphaproteobacteria... [more]
M2X6B1_GALSU1.560e-4333.13Ribosomal large subunit pseudouridine synthase C n... [more]
A0A1Z9J471_9PROT8.460e-4332.83Pseudouridine synthase n=1 Tax=Rhodospirillaceae b... [more]
UPI00174D68233.110e-4232.11RluA family pseudouridine synthase n=1 Tax=Kordiim... [more]
A0A8J2ZBU1_9PROT6.250e-4232.82Pseudouridine synthase n=2 Tax=Caldovatus sedimini... [more]
A0A843RKL5_9PROT1.180e-4132.32Pseudouridine synthase n=1 Tax=Kiloniellaceae bact... [more]
A0A4R3J801_9PROT1.390e-4130.65Pseudouridine synthase n=1 Tax=Varunaivibrio sulfu... [more]
A0A7C7PJE5_9PROT5.050e-4131.38Pseudouridine synthase n=1 Tax=Kiloniellaceae bact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 58..124
e-value: 4.2E-5
score: 33.0
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 59..121
e-value: 2.35493E-6
score: 43.007
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 146..278
e-value: 1.3E-19
score: 70.8
IPR006145Pseudouridine synthase, RsuA/RluA-likeCDDcd02869PseudoU_synth_RluA_likecoord: 146..289
e-value: 7.4035E-35
score: 124.372
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 46..112
e-value: 4.0E-9
score: 37.8
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 128..326
e-value: 9.3E-36
score: 125.4
NoneNo IPR availablePIRSRPIRSR606225-1PIRSR606225-1coord: 130..303
e-value: 1.9E-23
score: 80.8
NoneNo IPR availablePANTHERPTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEcoord: 58..358
NoneNo IPR availablePANTHERPTHR21600:SF34MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE RPUSD4coord: 58..358
NoneNo IPR availablePROSITEPS50889S4coord: 58..144
score: 11.650398
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 53..157
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 140..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:264974..266071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6508.t1Gchil6508.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 264974..266071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6508.t1 ID=Gchil6508.t1|Name=Gchil6508.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=366bp
MTVATPALTHGAMRALVRRAFSSKPIQSSPNISSSQSFELPFAKQPARFK
VSPDLSGSRLDRFIKSRAPGLPPGLIHRHIRQARVQINGRIERRRGTPVR
ENDVISFPGEVKLGLSRRKKRPTPDDISLSEAMEVKQWLLYRDARVAVLN
KPPGLPVLSEPGKETSRTLEQLLCGLGTGRYWLVHRLQTQVGGAILVARD
VGAATLLSDFFRARVVTRLYWGLVSGVPRNKKGVVNMDIGGKKAVTRYRV
VQMIDNHYSWLELEPRTGRSNQLSIHCAEGLGTPLIGDRNFDNADDNQHP
VEAGALQLCSRTLTFPRLTQINPSIRQKRRCRSPDLVSVKSPLPPHMKDT
WRRLGLQESFASALS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR006145PsdUridine_synth_RsuA/RluA
IPR036986S4_RNA-bd_sf
IPR020103PsdUridine_synth_cat_dom_sf