Gchil6644.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil6644.t1 vs. uniprot
Match: A0A2V3J036_9FLOR (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J036_9FLOR) HSP 1 Score: 219 bits (559), Expect = 1.990e-71 Identity = 104/130 (80.00%), Postives = 117/130 (90.00%), Query Frame = 0
Query: 1 MAGIIFSDSFKIWRLDWDEKTKSVAKKFDKVSRIEGKSEAYETEMTLDINTELYPVSVGETIELLITERLEEGPPNPDDPRGYNPVKPLGDRANMYDYIMRGKIFKYTEDMQRADIYFSFGGLLMKLHDD 130
MAGIIFSDSFKI RLDWDEKTKSV KKFDKVSRIEGKSEAY+TE+ LD+NTE+YPVS E I++LITERLE+ PPNPDDP GYNP+KPLGDRA+ Y+YIM GKIFKY E+ QRA+IYFSFGGLLMKLH +
Sbjct: 1 MAGIIFSDSFKIRRLDWDEKTKSVIKKFDKVSRIEGKSEAYDTELVLDVNTEIYPVSADEVIDILITERLEDTPPNPDDPEGYNPIKPLGDRADAYEYIMHGKIFKYHEERQRANIYFSFGGLLMKLHGE 130
BLAST of Gchil6644.t1 vs. uniprot
Match: UPI001CFABD58 (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFABD58) HSP 1 Score: 100 bits (249), Expect = 2.230e-24 Identity = 55/142 (38.73%), Postives = 85/142 (59.86%), Query Frame = 0
Query: 1 MAGIIFSDSFKIWRLDWDEKTKSVAKKFDKVSRIEGKSEAYETEMTLDINTELYPVSVGETIELLITERL-EEGPPNPDDPRGYNPVKPLGDRANMYDYIMRGKIFKY------TEDMQRADIYFSFGGLLMKLHDDMESIE 135
MAGI+F D F + +D + KKFD+VSR+ +SE+++ E+ LD+NT++YPV +G+ L+I L E+G P+ D YNPV RA+ ++Y+M GK+++ TE R Y S+GGLLM+L D ++
Sbjct: 1 MAGILFEDIFDVKDID------PLGKKFDRVSRLHCESESFKMELILDVNTQVYPVDLGDKFRLVIASTLYEDGTPDDGD---YNPVDDKPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGGLLMRLQGDANNLH 133
BLAST of Gchil6644.t1 vs. uniprot
Match: E3TEV3_ICTPU (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=3 Tax=Clupeocephala TaxID=186625 RepID=E3TEV3_ICTPU) HSP 1 Score: 97.1 bits (240), Expect = 5.060e-23 Identity = 54/141 (38.30%), Postives = 79/141 (56.03%), Query Frame = 0
Query: 1 MAGIIFSDSFKIWRLDWDEKTKSVAKKFDKVSRIEGKSEAYETEMTLDINTELYPVSVGETIELLITERLEEGPPNPDDPRGYNPVKPLGDRANMYDYIMRGKIFKY------TEDMQRADIYFSFGGLLMKLHDDMESIE 135
MAGI+F D F + +D D KKFD+VSR+ +SE+++ ++ LD+NT++YPV +G+ L+I L E D YNP RA+ +DY M GK++K TE R Y S+GGLLM+L D ++
Sbjct: 1 MAGILFEDIFDVKDIDPD------GKKFDRVSRLHCESESFKMDLILDVNTQIYPVELGDKFRLVIASTLYED--GTSDDGEYNPTDDRPSRADQFDYAMYGKVYKIEGDETSTEAATRLSAYVSYGGLLMRLQGDANNLH 133
BLAST of Gchil6644.t1 vs. uniprot
Match: A0A3P8RBI7_ASTCA (RNA polymerase II subunit H n=1 Tax=Astatotilapia calliptera TaxID=8154 RepID=A0A3P8RBI7_ASTCA) HSP 1 Score: 97.1 bits (240), Expect = 1.070e-22 Identity = 56/142 (39.44%), Postives = 83/142 (58.45%), Query Frame = 0
Query: 1 MAGIIFSDSFKIWRLDWDEKTKSVAKKFDKVSRIEGKSEAYETEMTLDINTELYPVSVGETIELLITERL-EEGPPNPDDPRGYNPVKPLGDRANMYDYIMRGKIFKY------TEDMQRADIYFSFGGLLMKLHDDMESIE 135
MAGI+F D F + +D D KKFD+VSR+ +SE+++ ++ LD+N ++YPV +G+ L+I L E+G PDD YNP RA+ +DY+M GK++K TE R Y S+GGLLM+L D ++
Sbjct: 30 MAGILFEDIFDVKDIDPD------GKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVIASTLYEDG--TPDDGE-YNPQDDRPSRADQFDYVMYGKVYKIEGDETSTEAATRLSAYVSYGGLLMRLQGDANNLH 162
BLAST of Gchil6644.t1 vs. uniprot
Match: Q568H8_DANRE (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=128 Tax=Gnathostomata TaxID=7776 RepID=Q568H8_DANRE) HSP 1 Score: 95.9 bits (237), Expect = 1.430e-22 Identity = 55/142 (38.73%), Postives = 83/142 (58.45%), Query Frame = 0
Query: 1 MAGIIFSDSFKIWRLDWDEKTKSVAKKFDKVSRIEGKSEAYETEMTLDINTELYPVSVGETIELLITERL-EEGPPNPDDPRGYNPVKPLGDRANMYDYIMRGKIFKY------TEDMQRADIYFSFGGLLMKLHDDMESIE 135
MAGI+F D F + +D D KKFD+VSR+ +SE+++ ++ LD+N ++YPV +G+ L+I L E+G PDD YNP RA+ +DY+M GK+++ TE R Y S+GGLLM+L D ++
Sbjct: 1 MAGILFEDIFDVKDIDPD------GKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVIASTLYEDG--TPDDGE-YNPQDDRPSRADQFDYVMYGKVYRIEGDETSTEAATRLSAYVSYGGLLMRLQGDANNLH 133
BLAST of Gchil6644.t1 vs. uniprot
Match: A0A1B0CWD7_LUTLO (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=10 Tax=Diptera TaxID=7147 RepID=A0A1B0CWD7_LUTLO) HSP 1 Score: 95.9 bits (237), Expect = 1.430e-22 Identity = 53/142 (37.32%), Postives = 85/142 (59.86%), Query Frame = 0
Query: 1 MAGIIFSDSFKIWRLDWDEKTKSVAKKFDKVSRIEGKSEAYETEMTLDINTELYPVSVGETIELLITERL-EEGPPNPDDPRGYNPVKPLGDRANMYDYIMRGKIFK------YTEDMQRADIYFSFGGLLMKLHDDMESIE 135
MAG++F D F + +D + KKFD+VSR+ +SE+++ ++ LDIN LYP+ +G+ L++ L E+G P + YNP++ G RA+ ++Y+M GKI++ +TE R Y SFGGLLM+L D ++
Sbjct: 1 MAGVLFEDIFNVKDMDPE------GKKFDRVSRLHCESESFKMDLILDINCWLYPMELGDKFRLVLATTLYEDGHPGSGE---YNPLETEGTRADSFEYVMYGKIYRIEGDEAHTEASSRLSAYVSFGGLLMRLQGDANNLH 133
BLAST of Gchil6644.t1 vs. uniprot
Match: A0A6P5A3K3_BRABE (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5A3K3_BRABE) HSP 1 Score: 95.1 bits (235), Expect = 2.860e-22 Identity = 51/142 (35.92%), Postives = 84/142 (59.15%), Query Frame = 0
Query: 1 MAGIIFSDSFKIWRLDWDEKTKSVAKKFDKVSRIEGKSEAYETEMTLDINTELYPVSVGETIELLITERL-EEGPPNPDDPRGYNPVKPLGDRANMYDYIMRGKIFK------YTEDMQRADIYFSFGGLLMKLHDDMESIE 135
MAG++F D F + +D D KKFD+VSR+ +SE+++ E+ LD+NT++YPV +G+ L++ L E+G P+ + + P RA+ ++Y+M GKI++ +TE R Y S+GGLLM+L D ++
Sbjct: 1 MAGVLFEDIFDVKDIDPD------GKKFDRVSRLHCESESFKMELILDVNTQVYPVDIGDKFRLVLASTLREDGAPDDGE---FIPTDGTPSRADQFEYVMYGKIYRIEGDDTHTESATRLSAYVSYGGLLMRLQGDANNLH 133
BLAST of Gchil6644.t1 vs. uniprot
Match: A0A3P8WE80_CYNSE (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WE80_CYNSE) HSP 1 Score: 95.1 bits (235), Expect = 3.260e-22 Identity = 55/142 (38.73%), Postives = 83/142 (58.45%), Query Frame = 0
Query: 1 MAGIIFSDSFKIWRLDWDEKTKSVAKKFDKVSRIEGKSEAYETEMTLDINTELYPVSVGETIELLITERL-EEGPPNPDDPRGYNPVKPLGDRANMYDYIMRGKIFKY------TEDMQRADIYFSFGGLLMKLHDDMESIE 135
MAGI+F D F + +D D KKFD+VSR+ +SE+++ ++ LD+N +++PV +G+ L+I L E+G PDD YNP RA+ +DY+M GK++K TE R Y S+GGLLM+L D ++
Sbjct: 1 MAGILFEDIFDVKDIDPD------GKKFDRVSRLHCESESFKMDLILDVNIQIFPVDLGDKFRLVIASTLYEDG--TPDDGE-YNPQDDRPSRADQFDYVMYGKVYKIEGDETSTEAATRLSAYASYGGLLMRLQGDANNLH 133
BLAST of Gchil6644.t1 vs. uniprot
Match: Q9VNZ3_DROME (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=28 Tax=Schizophora TaxID=43738 RepID=Q9VNZ3_DROME) HSP 1 Score: 93.6 bits (231), Expect = 1.110e-21 Identity = 52/141 (36.88%), Postives = 85/141 (60.28%), Query Frame = 0
Query: 1 MAGIIFSDSFKIWRLDWDEKTKSVAKKFDKVSRIEGKSEAYETEMTLDINTELYPVSVGETIELLITERL-EEGPPNPDDPRGYNPVKPLGDRANMYDYIMRGKIFKYTED-----MQRADIYFSFGGLLMKLHDDMESIE 135
MAG++F D F + +D + KKFD+VSR+ +SE+++ ++ LDIN+ LYP+ +G+ L++ L E+G P+ + YNP++ G RA+ ++Y+M GKI++ D R Y SFGGLLM+L D ++
Sbjct: 1 MAGVLFEDIFNVKDMDPE------GKKFDRVSRLHCESESFKMDLILDINSWLYPMELGDKFRLVLATTLREDGCPDSGE---YNPMEHEGTRADSFEYVMYGKIYRIEGDEAHNEASRLSAYVSFGGLLMRLQGDANNLH 132
BLAST of Gchil6644.t1 vs. uniprot
Match: A0A2B4S6K0_STYPI (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=4 Tax=Scleractinia TaxID=6125 RepID=A0A2B4S6K0_STYPI) HSP 1 Score: 93.2 bits (230), Expect = 1.620e-21 Identity = 52/141 (36.88%), Postives = 80/141 (56.74%), Query Frame = 0
Query: 1 MAGIIFSDSFKIWRLDWDEKTKSVAKKFDKVSRIEGKSEAYETEMTLDINTELYPVSVGETIELLITERLEEGPPNPDDPRGYNPVKPLGDRANMYDYIMRGKIFKYTEDMQRADI------YFSFGGLLMKLHDDMESIE 135
MAG++F D F + +D + KKFD+VSR+ +SE+++ ++ LD+NT++YPV GE L++ L E PDD YNP RA+ ++Y+M GK+++ D D Y SFGGLLM+L D ++
Sbjct: 1 MAGVLFEDIFDVKDIDPE------GKKFDRVSRLHCESESFKMDLILDVNTQIYPVDYGEKFRLVLANTLREDG-TPDDGE-YNPSDSGPSRADQFEYVMYGKVYRIEGDESGVDAPTRLAAYVSFGGLLMRLQGDANNLH 133 The following BLAST results are available for this feature:
BLAST of Gchil6644.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil6644.t1 ID=Gchil6644.t1|Name=Gchil6644.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=139bpback to top |