Gchil7598.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7598.t1
Unique NameGchil7598.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length376
Homology
BLAST of Gchil7598.t1 vs. uniprot
Match: UPI0014587CA2 (E3 ubiquitin-protein ligase RNF6-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014587CA2)

HSP 1 Score: 95.9 bits (237), Expect = 5.950e-19
Identity = 39/97 (40.21%), Postives = 62/97 (63.92%), Query Frame = 0
Query:  267 GETYEDWLNVIERMGGNVNRGGSEAEIERLPTHSFEQDSSAETGDGEQQEKCAICLGEYERGDHVKVLPCAHRFHAECVDQWLRVNRICPFCKQSIR 363
            G  YED LN+ E +G   N+G +EA+  RLP  +++ +     GD +  E C IC+ EY++GD +K+LPC H FH++C+D+W+  N  CP C+  ++
Sbjct:  187 GNDYEDLLNLAEMLGDVKNKGLTEAQSSRLPVRTYQAN-----GDKQDSEDCLICMCEYDQGDRLKMLPCFHEFHSQCIDKWIMGNASCPVCRVEVK 278          
BLAST of Gchil7598.t1 vs. uniprot
Match: UPI000359E0A2 (uncharacterized protein LOC101863671 isoform X1 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI000359E0A2)

HSP 1 Score: 97.4 bits (241), Expect = 1.340e-18
Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:  268 ETYEDWLNVIERMGGNVNRGGSEAEIERLPTHSFEQDSS--AETGDGE-QQEKCAICLGEYERGDHVKVLPCAHRFHAECVDQWLRVNRICPFCKQSIRA 364
            E YE  L + E++G  VNRG S++E+++LPT     DSS  AE G G    ++C ICL +YE GD  + LPC H FH +CVDQWL+ N  CP C+  ++A
Sbjct:  364 EDYEQLLALAEQIG-EVNRGLSKSELDKLPTSKHRCDSSEGAEAGAGSADSQQCNICLNDYENGDRKRNLPCKHDFHKDCVDQWLKTNATCPVCRADVKA 462          
BLAST of Gchil7598.t1 vs. uniprot
Match: A0A1E1WS47_PECGO (RING-type domain-containing protein (Fragment) n=1 Tax=Pectinophora gossypiella TaxID=13191 RepID=A0A1E1WS47_PECGO)

HSP 1 Score: 90.5 bits (223), Expect = 1.820e-18
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 0
Query:  268 ETYEDWLNVIERMGGNVNRGGSEAEIERLPTHSFEQDSSAETGDGEQQEKCAICLGEYERGDHVKVLPCAHRFHAECVDQWLRVNRICPFCK 359
            E YE  L++ ER+G    RG    EI++LP++ +     A+T  GEQ   C +C+ E+E    ++VLPCAH FHA+CVD+WLR NR CP C+
Sbjct:   32 ENYEALLSLAERLGEAKPRGLQRQEIDQLPSYKY----CAQTHQGEQTS-CVVCMCEFEARQTLRVLPCAHEFHAKCVDKWLRSNRTCPICR 118          
BLAST of Gchil7598.t1 vs. uniprot
Match: A0A2W1BA54_HELAM (RING-type domain-containing protein n=1 Tax=Helicoverpa armigera TaxID=29058 RepID=A0A2W1BA54_HELAM)

HSP 1 Score: 89.7 bits (221), Expect = 3.490e-18
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 0
Query:  268 ETYEDWLNVIERMGGNVNRGGSEAEIERLPTHSFEQDSSAETGDGEQQEKCAICLGEYERGDHVKVLPCAHRFHAECVDQWLRVNRICPFCK 359
            E YE  L++ ER+G    RG +  EI+ LP++ F    +A T  GEQ   C +C+ E+E    ++VLPCAH FHA+CVD+WLR NR CP C+
Sbjct:   32 ENYEALLSLAERLGEAKPRGLARHEIDALPSYKF----AAATHRGEQTS-CVVCMCEFESRQTLRVLPCAHEFHAKCVDKWLRSNRTCPICR 118          
BLAST of Gchil7598.t1 vs. uniprot
Match: A0A8B8BSE2_CRAVI (E3 ubiquitin-protein ligase arkadia-A-like isoform X1 n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8BSE2_CRAVI)

HSP 1 Score: 97.1 bits (240), Expect = 3.970e-18
Identity = 46/96 (47.92%), Postives = 63/96 (65.62%), Query Frame = 0
Query:  269 TYEDWLNVIERMGGNVNRGGSEAEIERLPTHSFEQDSSAETGDGEQQEKCAICLGEYERGDHVKVLPCAHRFHAECVDQWLRVNRICPFCKQSIRA 364
            TYE+ L++ ER+G NVNRG ++  IE + T  ++     + GD +QQEKC ICL E+E  + V+ LPC H FH +CVDQWL  N+ CP C+  I A
Sbjct: 1001 TYEELLSLEERLG-NVNRGATQDIIE-MNTLPYKYKKMKKDGDDDQQEKCTICLSEFEMEEDVRRLPCMHLFHIQCVDQWLTTNKKCPICRVDIEA 1094          
BLAST of Gchil7598.t1 vs. uniprot
Match: A0A669EBV7_ORENI (RING-type domain-containing protein n=8 Tax=Pseudocrenilabrinae TaxID=318546 RepID=A0A669EBV7_ORENI)

HSP 1 Score: 87.0 bits (214), Expect = 1.720e-17
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 0
Query:  267 GETYEDWLNVIERMGGNVNRGGSEAEIERLPTHSFEQDSSAETGDGEQQEKCAICLGEYERGDHVKVLPCAHRFHAECVDQWLRVNRICPFCKQSIRAADAPA 369
            G  YE  L   ER G  V+R  S  EI+R PT  F+  SS   G G  Q  C IC  +Y+ G+ +++LPC H +H +C+D+WL+ N  CP C+ ++   DA A
Sbjct:    1 GNDYEALLEFEERQGAVVSRKLSRREIQRFPTKVFQGSSS---GSGNTQ--CQICFCDYDNGEKLRMLPCFHDYHVQCIDRWLKDNTTCPICRANLADGDAVA 98          
BLAST of Gchil7598.t1 vs. uniprot
Match: A0A0N1II06_PAPMA (RING finger protein 38 n=2 Tax=Papilio machaon TaxID=76193 RepID=A0A0N1II06_PAPMA)

HSP 1 Score: 91.7 bits (226), Expect = 3.480e-17
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0
Query:  268 ETYEDWLNVIERMGGNVNRGGSEAEIERLPTHSFEQDSSAETGDGEQQEKCAICLGEYERGDHVKVLPCAHRFHAECVDQWLRVNRICPFCK 359
            E YE  L++ ER+G    RG +  EI++LPT+ +    S +T  GEQ   C +C+ E+E    ++VLPCAH FHA+CVD+WLR NR CP C+
Sbjct:  222 ENYEALLSLAERLGEAKPRGLARHEIDQLPTYKY----SEQTRHGEQTS-CVVCMCEFEARQTLRVLPCAHEFHAKCVDKWLRSNRTCPICR 308          
BLAST of Gchil7598.t1 vs. uniprot
Match: N6U345_DENPD (RING-type domain-containing protein (Fragment) n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6U345_DENPD)

HSP 1 Score: 89.4 bits (220), Expect = 4.760e-17
Identity = 40/92 (43.48%), Postives = 62/92 (67.39%), Query Frame = 0
Query:  268 ETYEDWLNVIERMGGNVNRGGSEAEIERLPTHSFEQDSSAETGDGEQQEKCAICLGEYERGDHVKVLPCAHRFHAECVDQWLRVNRICPFCK 359
            E YE  LN+ E++G    RG ++ EIE+L ++ F    +A+T +G+Q   C +C+ ++E    ++VLPCAH FHA+C+D+WLR NR CP C+
Sbjct:  128 ENYEALLNLAEQLGEAKPRGLAKLEIEQLVSYKF----NADTHEGDQTS-CVVCMCDFEARQMLRVLPCAHEFHAKCIDKWLRSNRTCPICR 214          
BLAST of Gchil7598.t1 vs. uniprot
Match: A0A2V3ITN3_9FLOR (Calcium/calmodulin-dependent protein kinase type 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITN3_9FLOR)

HSP 1 Score: 93.6 bits (231), Expect = 5.340e-17
Identity = 99/267 (37.08%), Postives = 124/267 (46.44%), Query Frame = 0
Query:   17 PSYPQPTREWPQPSTAPPPSEA---RFPFVQGTPSFGAADMLNDLFRHIAQSQRPSGNSXXXXXXXXXXXXXXXXXXXXXTAGLAALAHF---NGR-EYVPVAQPAAPPRATAASADGVLSSVLQETFGRMDDRMFGAGSFSVTPDGVHFEHMRTPPGARVSLTRATPPTGASATAGSGGAPQPPHGGRVQFGDAGDMMNIMFSGMFGPFAAMGGGGGXXXXXXATXXXXXXXXXXXXXGAAFGEFLRAMVPGG-MEGGETYEDWLN 275
            P YPQP   WPQP TAPP S +   RFPF QG P+F   DM + + R I +S RP G+                       +GL  +A     +GR +           R +++ AD   +SVL+ETFGR+ D     G+F+ +PDGVHFE +               P+   A                           MF G   PF      G  XXXXX  XXXXXXXXXXXXX  AF +  RA+ PGG +EGGETYEDW+N
Sbjct:   66 PHYPQPFNHWPQPPTAPPSSHSSQPRFPFAQGRPTFELDDMFSMMLRRIVESTRPDGSDAAAPHAM---------------SGLNEMAQNGMGSGRAQXXXXXXXXXXXRRSSSGADRSFNSVLEETFGRIGDSDMRGGAFTFSPDGVHFERLHP---------HVMRPSSGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXMFPGTLSPF------GSGXXXXXXXXXXXXXXXXXXXXAHAFADIFRALFPGGAVEGGETYEDWVN 302          
BLAST of Gchil7598.t1 vs. uniprot
Match: A0A0N1INA9_PAPXU (RING finger protein 38 n=1 Tax=Papilio xuthus TaxID=66420 RepID=A0A0N1INA9_PAPXU)

HSP 1 Score: 91.7 bits (226), Expect = 6.230e-17
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0
Query:  268 ETYEDWLNVIERMGGNVNRGGSEAEIERLPTHSFEQDSSAETGDGEQQEKCAICLGEYERGDHVKVLPCAHRFHAECVDQWLRVNRICPFCK 359
            E YE  L++ ER+G    RG +  EI++LPT+ +    S +T  GEQ   C +C+ E+E    ++VLPCAH FHA+CVD+WLR NR CP C+
Sbjct:  272 ENYEALLSLAERLGEAKPRGLARHEIDQLPTYKY----SEQTRHGEQTS-CVVCMCEFEARQTLRVLPCAHEFHAKCVDKWLRSNRTCPICR 358          
The following BLAST results are available for this feature:
BLAST of Gchil7598.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0014587CA25.950e-1940.21E3 ubiquitin-protein ligase RNF6-like n=1 Tax=Pect... [more]
UPI000359E0A21.340e-1847.00uncharacterized protein LOC101863671 isoform X1 n=... [more]
A0A1E1WS47_PECGO1.820e-1845.65RING-type domain-containing protein (Fragment) n=1... [more]
A0A2W1BA54_HELAM3.490e-1846.74RING-type domain-containing protein n=1 Tax=Helico... [more]
A0A8B8BSE2_CRAVI3.970e-1847.92E3 ubiquitin-protein ligase arkadia-A-like isoform... [more]
A0A669EBV7_ORENI1.720e-1740.78RING-type domain-containing protein n=8 Tax=Pseudo... [more]
A0A0N1II06_PAPMA3.480e-1746.74RING finger protein 38 n=2 Tax=Papilio machaon Tax... [more]
N6U345_DENPD4.760e-1743.48RING-type domain-containing protein (Fragment) n=1... [more]
A0A2V3ITN3_9FLOR5.340e-1737.08Calcium/calmodulin-dependent protein kinase type 1... [more]
A0A0N1INA9_PAPXU6.230e-1746.74RING finger protein 38 n=1 Tax=Papilio xuthus TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 318..358
e-value: 8.0E-8
score: 42.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 317..359
e-value: 5.5E-14
score: 52.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 318..359
score: 12.577796
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 278..365
e-value: 2.7E-22
score: 80.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availablePANTHERPTHR45931SI:CH211-59O9.10coord: 89..366
NoneNo IPR availablePANTHERPTHR45931:SF3SI:CH211-59O9.10coord: 89..366
NoneNo IPR availableCDDcd16474RING-H2_RNF111_likecoord: 316..359
e-value: 6.99505E-21
score: 82.7445
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 317..364

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:2175502..2176629 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7598.t1Gchil7598.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 2175502..2176629 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7598.t1 ID=Gchil7598.t1|Name=Gchil7598.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=376bp
MPHRPAPPQGRPDRRVPSYPQPTREWPQPSTAPPPSEARFPFVQGTPSFG
AADMLNDLFRHIAQSQRPSGNSSGGGGGGGGAAAAAAATTAAATAGLAAL
AHFNGREYVPVAQPAAPPRATAASADGVLSSVLQETFGRMDDRMFGAGSF
SVTPDGVHFEHMRTPPGARVSLTRATPPTGASATAGSGGAPQPPHGGRVQ
FGDAGDMMNIMFSGMFGPFAAMGGGGGGGGGGGATGGGATGGGLAGAGGA
AFGEFLRAMVPGGMEGGETYEDWLNVIERMGGNVNRGGSEAEIERLPTHS
FEQDSSAETGDGEQQEKCAICLGEYERGDHVKVLPCAHRFHAECVDQWLR
VNRICPFCKQSIRAADAPASTSRRS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD