Gchil8136.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil8136.t1 vs. uniprot
Match: A0A2V3IM82_9FLOR (Ribosome biogenesis protein WDR12-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM82_9FLOR) HSP 1 Score: 283 bits (724), Expect = 4.300e-91 Identity = 140/220 (63.64%), Postives = 176/220 (80.00%), Query Frame = 0
Query: 194 MNSRETKAASFSAASVKHNTNMVALGCADGSIWLTQDCLDGVTEPSEAKKRKSVASMGASRVTDGDLCVSGLVWREKEIVSVGWDGFTHVFCAETCTKKTTIPSGGKALTSVAAVQDADWLVVSAVDGAVRLIDGRLGKGVVGACGKRGAHRGIVTDLSAGEMVVVSSGVDGCVKFWDRRSLLSPQQTVRSEGKLFAVDMVKGEGGKARVFAGGQRGHVL 413
M++ ETK ASFSAASVK ++ ALGC DGS+WL QDCL + +KRK+V+++ ASRVTDG L V+GL+WR +IVSVGWDGFT VFCA+TCTKKTTIPSGGK LTSV ++ + +VSAVDGAVR++DGR GKGVV ACGKR AH+GIVTD++A E +VVS+G+DG VKFWD+RSLL+PQ T+R++GKLFAVD+++G + VFA GQ G VL
Sbjct: 1 MDTSETKPASFSAASVKSGSSTAALGCMDGSLWLAQDCLGNTNDAHGDRKRKAVSNIPASRVTDGVLRVTGLLWRANDIVSVGWDGFTSVFCADTCTKKTTIPSGGKPLTSVVSLDGSGCFIVSAVDGAVRMVDGRSGKGVVAACGKREAHQGIVTDVAAQEELVVSTGMDGTVKFWDQRSLLTPQHTIRTDGKLFAVDLIRGT--RNTVFAAGQTGKVL 218
BLAST of Gchil8136.t1 vs. uniprot
Match: A0A2V3IM57_9FLOR (Ribosome biogenesis protein WDR12-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM57_9FLOR) HSP 1 Score: 256 bits (653), Expect = 5.900e-81 Identity = 122/180 (67.78%), Postives = 150/180 (83.33%), Query Frame = 0
Query: 1 MVAPTATTSSRALQVRFKSGVEQEHYKGAHNAMLQVPAHFGRNSLRTVVHTLLNLAEEDKPNFHFLVDETPLRTTLDKFLERRSLSFEVTLTLTYYLPIPEPDPKGDIGISENWISSLHADANCRVLAGLFSGRVSILQGDEVILDERNFSEPHQGPVKDVQWINEDHFLTASSDETACV 180
MV P A +SS+ +Q+RFK G+E + YK AHNA+LQVPAH GR SL+T++HTLLNL+EED+P+FHFLVDE PLRTTLDKF+ERR+LSFE TL+LTY+LPI EP+ + D IS+NWISSLHA + RVLAGLFSGR SI+ D+VIL E +F H+ PVK VQW+N++HFLTASSDETACV
Sbjct: 1 MVGPIAPSSSKTIQIRFKCGIENQTYKSAHNAVLQVPAHLGRKSLKTLLHTLLNLSEEDRPDFHFLVDEVPLRTTLDKFIERRNLSFENTLSLTYFLPIAEPNREPDTSISQNWISSLHAHKDGRVLAGLFSGRSSIVHDDKVILAESSFPHSHEAPVKAVQWLNDNHFLTASSDETACV 180
BLAST of Gchil8136.t1 vs. uniprot
Match: R7QIE4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIE4_CHOCR) HSP 1 Score: 80.9 bits (198), Expect = 4.060e-15 Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 314 LVVSAVDGAVRLIDGRLGKGVVGACGKRGAHRGIVTD---LSAGEMVVVSSGVDGCVKFWDRRSLLSP---QQTVRSEGKLFAVDMVKGEGGKARVFAGGQRGHV 412
++VSAVDG VRL+D R GKGVV ACG++GAHRG+VTD + AG+ V S G DG V+ WD R+L++P + V GK AV E VF+ G G V
Sbjct: 1 MLVSAVDGGVRLVDAREGKGVVAACGRKGAHRGVVTDACWMVAGKSAV-SGGGDGSVRLWDVRALMTPAHIMERVHEGGKSLAVAAAGEE-----VFSAGADGKV 99
BLAST of Gchil8136.t1 vs. uniprot
Match: A0A1X6PI17_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PI17_PORUM) HSP 1 Score: 75.9 bits (185), Expect = 1.900e-11 Identity = 84/324 (25.93%), Postives = 120/324 (37.04%), Query Frame = 0
Query: 154 HQGPVKDVQWINE----DHFLTASSDETACVWRFSGGDA--------------RMVCRMNSRETKAASFSAASVKHNTNMVALGC----ADGSIW--------LTQDCLDG---------VTEPSEAKKR--KSVASMGASRVTDGD--LCVSGLVWR-EKEIVSVGWDGFTHVFCAETCTKKTTIPSGGKALTSVAAVQDADW------------------LVVSAVDGAVRLIDGRLGKG--VVGACGKRGAHRGIVTDLSAGEMV-VVSSGVDGCVKFWDRRSLLSPQQTVRSEGKLFAVDMVKGEGGKARVFAGGQRGHV 412
H P+ V W+ + F TA SDET +W R V R + T A F +G +W L + DG P +KR +V ++G R+ G L V+ + + E+ WDG ++ + + T+P+GGKALT +A + L V+A+DGAVRL+D R+ G VVGA R H GI + + V + + G DG V WD RSL +P + G R+FAGG G V
Sbjct: 32 HGAPIAGVAWLPDLTGGGAFATAGSDETVRLWSAXXXXXXXXXXXXXXXXXALRGVFRSDEVATAATPFXXXXXXXXXXXXXXXXXXXGTNGDVWVVDARAARLDEAAPDGXXXXADAGAAAAPGRGRKRPPSTVPALGGRRLDGGPRHLPVAAVAFGGADELAGASWDGLVRLWAVDAGVVRVTLPAGGKALTGMALAPPSXXXXXXXXXXXXXXXXXVSVLAVTAIDGAVRLLDARVAAGAVVVGASPPRRGHAGIASAVVWTSAVGLATGGHDGAVAVWDVRSLAAPTDRLADAGXXXXXXXXX-----XRLFAGGSDGQV 350 The following BLAST results are available for this feature:
BLAST of Gchil8136.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil8136.t1 ID=Gchil8136.t1|Name=Gchil8136.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=418bpback to top |