Gchil8123.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8123.t1
Unique NameGchil8123.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length248
Homology
BLAST of Gchil8123.t1 vs. uniprot
Match: A0A2V3IM52_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM52_9FLOR)

HSP 1 Score: 82.8 bits (203), Expect = 1.980e-15
Identity = 56/170 (32.94%), Postives = 86/170 (50.59%), Query Frame = 0
Query:   79 FVWKSSLNFHSRTAHKDRRNQTPISHAKSQTPSTAPMEFVQSDDLRPESDKD-EPFSKSLGQHTCDYGDMALQLQALATNEPCVSDLLNNNEVTDESHGQVGSWEQSSIAPLGTWGDEPLLQDIGLRGCFDGFDVLPSWVPGVETDNCFLASDAEKLLFDDHNRNLFSEF 247
            FVWKSSLNFHSRTAHK+ R Q P S + +Q P +A  +  +  +L+   +    P +   G   C   ++ +  Q +  +EP   ++ +N+EV  ++    G  E+  +  LG WG +           F  FD     +   ETD  F AS  E+LLF D N ++F++F
Sbjct:   80 FVWKSSLNFHSRTAHKELRTQIPTSQSHAQNPKSAANDNNEKANLQTSEEVSIAPHNMEPGMLNCT--NLTIHSQGIRKDEPKPVEIQSNSEVASDTLAVFGVLEEDPLPVLGEWGSD----------YFQTFDFPSPCMTSNETDILFPASAEEQLLFGD-NTDIFNDF 236          
BLAST of Gchil8123.t1 vs. uniprot
Match: A0A6J2THS2_DROLE (zinc finger protein 28-like isoform X2 n=1 Tax=Drosophila lebanonensis TaxID=7225 RepID=A0A6J2THS2_DROLE)

HSP 1 Score: 67.8 bits (164), Expect = 2.270e-9
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   34 KAKKPRPRPVCKVCGKSFSKPANLKAHERIHTGEKRYMCLICDRRFVWKSSLNFH 88
            +A++   R  CK CGK F+KP+N +AHER+HTGE+ ++C ICD  F WK SL  H
Sbjct:  490 RAEEGGIRYNCKYCGKRFTKPSNCRAHERVHTGERPFICEICDVSFKWKQSLQRH 544          
BLAST of Gchil8123.t1 vs. uniprot
Match: A0A6J2TI14_DROLE (zinc finger protein 709-like isoform X1 n=1 Tax=Drosophila lebanonensis TaxID=7225 RepID=A0A6J2TI14_DROLE)

HSP 1 Score: 67.8 bits (164), Expect = 2.620e-9
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   34 KAKKPRPRPVCKVCGKSFSKPANLKAHERIHTGEKRYMCLICDRRFVWKSSLNFH 88
            +A++   R  CK CGK F+KP+N +AHER+HTGE+ ++C ICD  F WK SL  H
Sbjct:  490 RAEEGGIRYNCKYCGKRFTKPSNCRAHERVHTGERPFICEICDVSFKWKQSLQRH 544          
BLAST of Gchil8123.t1 vs. uniprot
Match: A0A6J8EIQ9_MYTCO (KRAB n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8EIQ9_MYTCO)

HSP 1 Score: 64.7 bits (156), Expect = 2.610e-8
Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   33 TKAKKPRPRPVCKVCGKSFSKPANLKAHERIHTGEKRYMCLICDRRFVWKSSLNFHSRTAHK 94
            TK  KP+ R +CK+CGKSF +P+ L+ H  IHTGE+ + C  C++ F  +  L  H +  HK
Sbjct:  323 TKTYKPKDRVICKLCGKSFGRPSELRRHSVIHTGERNHKCEECEKVFTQRYHLIRHVKNVHK 384          
BLAST of Gchil8123.t1 vs. uniprot
Match: UPI001E68C90D (zinc finger protein 766-like n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E68C90D)

HSP 1 Score: 61.6 bits (148), Expect = 3.180e-8
Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 0
Query:   43 VCKVCGKSFSKPANLKAHERIHTGEKRYMCLICDRRFVWKSSLNFHSRTAHKDRRNQTP 101
            +C++CGK F  PANL+ H ++HTGEK+Y C IC +R+  K     H   +H D   + P
Sbjct:   30 LCELCGKKFPLPANLRDHMQVHTGEKKYKCEICPKRYTTKFVAKAHMLNSHSDNPTRLP 88          
BLAST of Gchil8123.t1 vs. uniprot
Match: A0A293LMY4_ORNER (Uncharacterized protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LMY4_ORNER)

HSP 1 Score: 57.4 bits (137), Expect = 5.280e-7
Identity = 32/91 (35.16%), Postives = 46/91 (50.55%), Query Frame = 0
Query:    1 MSQSQGTDTTTGFNREFGLVIGNSSRHTFSSGTKAKKPRPRPVCKVCGKSFSKPANLKAHERIHTGEKRYMCLICDRRFVWKSSLNFHSRT 91
            +S  + TD T  F R        +S  +   GT     R    C  C  + ++   +K HERIHTG++ YMC +C + F  KS+LN H+RT
Sbjct:    6 LSGPEETDDTAPFPRPLRDGAVQASHRSHHDGTGRSCGRGEYQCTYCPYTCNRRGYIKQHERIHTGDRPYMCHVCFKGFALKSNLNQHART 96          
BLAST of Gchil8123.t1 vs. uniprot
Match: A0A224XKK1_9HEMI (Putative histone-lysine n-methyltransferase prdm9 (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKK1_9HEMI)

HSP 1 Score: 60.5 bits (145), Expect = 5.600e-7
Identity = 29/75 (38.67%), Postives = 42/75 (56.00%), Query Frame = 0
Query:   19 LVIGNSSRHTFSSGTKAKKPRPRPVCKVCGKSFSKPANLKAHERIHTGEKRYMCLICDRRFVWKSSLNFHSRTAH 93
            L + NS++H+        +  PR  C  C K+F   A++  H R HTGEK Y+C +C++ F  KS+L  H RT H
Sbjct:  339 LALNNSAKHS--------RKNPRVSCASCNKTFPSIASMLIHSRTHTGEKPYVCCVCEKGFNVKSNLLRHLRTLH 405          
BLAST of Gchil8123.t1 vs. uniprot
Match: P97673_RAT (Zinc finger protein 17 (Fragment) n=1 Tax=Rattus norvegicus TaxID=10116 RepID=P97673_RAT)

HSP 1 Score: 54.7 bits (130), Expect = 6.960e-7
Identity = 22/37 (59.46%), Postives = 27/37 (72.97%), Query Frame = 0
Query:   43 VCKVCGKSFSKPANLKAHERIHTGEKRYMCLICDRRF 79
             C  CGKSFSK + LKAH RIHTGE+ Y+C +C + F
Sbjct:    1 ACPECGKSFSKTSQLKAHSRIHTGERPYVCSVCGKAF 37          
BLAST of Gchil8123.t1 vs. uniprot
Match: A0A553NAV0_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NAV0_TIGCA)

HSP 1 Score: 60.5 bits (145), Expect = 8.120e-7
Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = 0
Query:   40 PRPVCKVCGKSFSKPANLKAHERIHTGEKRYMCLICDRRFVWKSSLNFHSRTAHK 94
            P  +C +CGK F+KP  L  H RIHTGEKRY C +CD +    S+L  H +  H+
Sbjct:  876 PEILCPICGKRFTKPEYLTLHNRIHTGEKRYKCDLCDFKTAVGSNLTNHKKFVHQ 930          
BLAST of Gchil8123.t1 vs. uniprot
Match: UPI0006D50948 (zinc finger protein Xfin n=1 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D50948)

HSP 1 Score: 58.9 bits (141), Expect = 1.930e-6
Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 0
Query:   30 SSGTKAKKPRPRPVCKVCGKSFSKPANLKAHERIHTGEKRYMCLICDRRFVWKSSLNFHSRTAH 93
            S+  ++ +  PR  C  C K+F   A++  H R HTGE+ Y+C +CD+ F  KS+L  H RT H
Sbjct:  389 SNDLRSGRKSPRATCPSCSKTFPSIASMLIHSRTHTGERPYVCCVCDKGFNVKSNLLRHLRTLH 452          
The following BLAST results are available for this feature:
BLAST of Gchil8123.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IM52_9FLOR1.980e-1532.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6J2THS2_DROLE2.270e-952.73zinc finger protein 28-like isoform X2 n=1 Tax=Dro... [more]
A0A6J2TI14_DROLE2.620e-952.73zinc finger protein 709-like isoform X1 n=1 Tax=Dr... [more]
A0A6J8EIQ9_MYTCO2.610e-843.55KRAB n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0... [more]
UPI001E68C90D3.180e-842.37zinc finger protein 766-like n=1 Tax=Maniola jurti... [more]
A0A293LMY4_ORNER5.280e-735.16Uncharacterized protein (Fragment) n=1 Tax=Ornitho... [more]
A0A224XKK1_9HEMI5.600e-738.67Putative histone-lysine n-methyltransferase prdm9 ... [more]
P97673_RAT6.960e-759.46Zinc finger protein 17 (Fragment) n=1 Tax=Rattus n... [more]
A0A553NAV0_TIGCA8.120e-747.27Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
UPI0006D509481.930e-640.63zinc finger protein Xfin n=1 Tax=Halyomorpha halys... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 42..64
e-value: 0.019
score: 24.1
coord: 70..93
e-value: 0.075
score: 22.2
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 43..64
e-value: 7.9E-6
score: 26.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 44..64
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 72..93
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 42..69
score: 14.81451
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 70..98
score: 11.156685
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 29..66
e-value: 2.8E-12
score: 48.2
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 67..95
e-value: 1.4E-9
score: 39.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..116
NoneNo IPR availablePANTHERPTHR24390ZINC FINGER PROTEINcoord: 43..105
NoneNo IPR availablePANTHERPTHR24390:SF140ZINC FINGER PROTEIN 763coord: 43..105
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 43..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:41611..42559 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8123.t1Gchil8123.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 41611..42559 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8123.t1 ID=Gchil8123.t1|Name=Gchil8123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=248bp
MSQSQGTDTTTGFNREFGLVIGNSSRHTFSSGTKAKKPRPRPVCKVCGKS
FSKPANLKAHERIHTGEKRYMCLICDRRFVWKSSLNFHSRTAHKDRRNQT
PISHAKSQTPSTAPMEFVQSDDLRPESDKDEPFSKSLGQHTCDYGDMALQ
LQALATNEPCVSDLLNNNEVTDESHGQVGSWEQSSIAPLGTWGDEPLLQD
IGLRGCFDGFDVLPSWVPGVETDNCFLASDAEKLLFDDHNRNLFSEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf