Gchil8331.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8331.t1
Unique NameGchil8331.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length165
Homology
BLAST of Gchil8331.t1 vs. uniprot
Match: A0A2V3IP44_9FLOR (DEAD-box ATP-dependent RNA helicase 21 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP44_9FLOR)

HSP 1 Score: 242 bits (618), Expect = 1.590e-74
Identity = 124/164 (75.61%), Postives = 141/164 (85.98%), Query Frame = 0
Query:    1 MSATIASNGLYALVVAPTREHALQIVTEAKKCTYPMRYRVVASIGCKEKDVQAMSLQAVCDVVVCTPGRMVDVLDRQMTALKNCNYLILDEVDRMIDMGSEPQLAQVLECIPEEGRQTFMYSATMSPAVDRMTRSYFKDPVVITMGETGKAADNSEKRIEFFSS 164
            M+A IA NG YALVVAPTRE ALQIVTEAKK T PM +RV+A IG +E DVQAMSLQA C+VVVCTPGRMVD+L RQM AL NCNYLILDE DRMIDMG EPQLA VL+C+P EGR+TFM+SATMS AV+R+ RSY KDPVVI++GETGKAADN  +R+E+FSS
Sbjct:  263 MTAAIAGNGPYALVVAPTRELALQIVTEAKKFTEPMGFRVIAIIGGQEMDVQAMSLQAGCEVVVCTPGRMVDLLSRQMAALGNCNYLILDEADRMIDMGFEPQLADVLDCMPSEGRRTFMFSATMSRAVERLARSYLKDPVVISVGETGKAADNVIQRVEYFSS 426          
BLAST of Gchil8331.t1 vs. uniprot
Match: R7QF74_CHOCR (DEAD box RNA helicase, putative n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF74_CHOCR)

HSP 1 Score: 185 bits (469), Expect = 2.940e-52
Identity = 95/169 (56.21%), Postives = 124/169 (73.37%), Query Frame = 0
Query:    1 MSATIASNGLYALVVAPTREHALQIVTEAKKCTYPMRYRVVASIGCKEKDVQAMSLQAVCDVVVCTPGRMVDVLDRQMTALKNCNYLILDEVDRMIDMGSEPQLAQVLECIPEEG------RQTFMYSATMSPAVDRMTRSYFKDPVVITMGETGKAADNSEKRIEFFS 163
            M+  IA  G YAL++APTRE ALQI  EA K   P+ YRVV  IG +  + QA SLQ  C++VVCTPGRM+D+L +QM AL NCNYLILDE DRMIDMG E  L+++L+ +P  G      RQTFM+SATMSP V+R+ ++Y  +PV++ +GETGKAADN  +R+E+F+
Sbjct:  307 MTRKIAMRGPYALILAPTRELALQIEAEALKFAKPLGYRVVHVIGGQGLEEQAASLQDGCEIVVCTPGRMIDLLSKQMAALGNCNYLILDEADRMIDMGFEEPLSEILDSMPHLGQESSKRRQTFMFSATMSPPVERIAKTYLHEPVIVLIGETGKAADNIIQRVEYFT 475          
BLAST of Gchil8331.t1 vs. uniprot
Match: A0A7S0BFF3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFF3_9RHOD)

HSP 1 Score: 164 bits (414), Expect = 3.050e-46
Identity = 85/182 (46.70%), Postives = 117/182 (64.29%), Query Frame = 0
Query:    1 MSATIASNGLYALVVAPTREHALQIVTEAKKCTYPMRYRVVASIGCKEKDVQAMSLQAVCDVVVCTPGRMVDVLDRQMTALKNCNYLILDEVDRMIDMGSEPQLAQVLECIPEEG------------------RQTFMYSATMSPAVDRMTRSYFKDPVVITMGETGKAADNSEKRIEFFSS 164
            M++  ++ G YAL++AP RE A QI TEA+K   P+ YRV + +G    + Q M+L+  C++VV TPGRM+D LDR+   L  C YL+LDE DRMIDMG EPQ+  VL+ IP                     RQTFM+SATM PAV+R+ R + + PV+I +GETGK+AD  E+++EF +S
Sbjct:   29 MTSANSAEGPYALIMAPIRELAQQIETEARKFAEPLGYRVCSVVGGLPIEAQGMALREGCEIVVATPGRMIDCLDRRFCVLNQCKYLVLDEADRMIDMGFEPQVQGVLDAIPSSNLKPEEENDLMDTGGSTVYRQTFMFSATMPPAVERLARKFLRRPVIIAVGETGKSADLVEQKVEFLAS 210          
BLAST of Gchil8331.t1 vs. uniprot
Match: UPI001E1DBD5D (DEAD-box ATP-dependent RNA helicase 21-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DBD5D)

HSP 1 Score: 162 bits (411), Expect = 6.610e-44
Identity = 89/192 (46.35%), Postives = 118/192 (61.46%), Query Frame = 0
Query:    5 IASNGLYALVVAPTREHALQIVTEAKKCTYPMRYRVVASIGCKEKDVQAMSLQAVCDVVVCTPGRMVDVLDRQMTALKNCNYLILDEVDRMIDMGSEPQLAQVLECIP---------------------EEG-----------RQTFMYSATMSPAVDRMTRSYFKDPVVITMGETGKAADNSEKRIEFFSS 164
            IAS+G YALV+APTRE  LQI  E +K   P+ YRV A IG +  + Q M+LQA  ++V+CTPGRMVD+L R++ AL NCNYL+LDE DRM+DMG E Q+ ++L  IP                       G           RQT M+SATMSPA++R+ R Y   P+V+T+G+TGK A+  E+ +E  SS
Sbjct:  300 IASDGPYALVLAPTRELVLQIEEETRKFAAPLGYRVTAVIGGQGLEEQGMALQAGSEIVICTPGRMVDLLSRRLAALGNCNYLVLDEADRMVDMGFEAQVQEILAAIPTCLSENLERAYRAMHGFHDLISHGHENSKQSTRLKRQTLMFSATMSPAIERIAREYLSRPIVVTIGQTGKVAEAVEQHVEILSS 491          
BLAST of Gchil8331.t1 vs. uniprot
Match: A0A7S3AAV5_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AAV5_9RHOD)

HSP 1 Score: 161 bits (407), Expect = 1.690e-43
Identity = 83/181 (45.86%), Postives = 115/181 (63.54%), Query Frame = 0
Query:    1 MSATIASNGLYALVVAPTREHALQIVTEAKKCTYPMRYRVVASIGCKEKDVQAMSLQAVCDVVVCTPGRMVDVLDRQMTALKNCNYLILDEVDRMIDMGSEPQLAQVLECIPEEG-----------------RQTFMYSATMSPAVDRMTRSYFKDPVVITMGETGKAADNSEKRIEFFSS 164
            M++  ++ G YAL++AP RE A QI  E +K   P+ YRV + +G    + Q M+L+  C++VV TPGRM+D LDR+   L  C YL+LDE DRMIDMG EPQ+  VL+ IP                    RQTFM+SATM PAV+R+ R + + PV+I +GETGK+AD  E+++EF +S
Sbjct:  270 MTSANSAEGPYALIMAPIRELAQQIEAETRKFAEPLGYRVCSVVGGLSIETQGMALREGCEIVVATPGRMIDCLDRRFCVLNQCKYLVLDEADRMIDMGFEPQVQGVLDAIPSSNLKPEEEDDVMDTESKVYRQTFMFSATMPPAVERLARKFLRRPVIIAVGETGKSADLVEQKVEFLAS 450          
BLAST of Gchil8331.t1 vs. uniprot
Match: A0A7S1XB50_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XB50_9RHOD)

HSP 1 Score: 155 bits (393), Expect = 4.360e-41
Identity = 78/189 (41.27%), Postives = 115/189 (60.85%), Query Frame = 0
Query:    1 MSATIASNGLYALVVAPTREHALQIVTEAKKCTYPMRYRVVASIGCKEKDVQAMSLQAVCDVVVCTPGRMVDVLDRQMTALKNCNYLILDEVDRMIDMGSEPQLAQVLECIPEEG---------------------------RQTFMYSATMSPAVDRMTRSYFKDPVVITMGETGKAADNSEKRIEFF 162
            M+  IA +G YA+++ PTRE A QI +EA+K   P+ YRV++ +G  + + Q   ++  C++V+ TPGRM+D L+R+   L  C Y++LDE DRMIDMG EPQ+ ++L+ IP                              RQTFM+SATM PAV+R+ R + + P+V+ +GETGK A   E+R+EFF
Sbjct:  406 MTTKIAEDGPYAIILTPTRELAQQIESEARKFAVPLGYRVMSIVGGLDVETQGSKIRDGCEIVIATPGRMIDCLERRYCVLNQCYYVVLDEADRMIDMGFEPQVQRILDAIPVTNLKPLESFNDDYPQHPALPPPGTDGKIYRQTFMFSATMPPAVERIARQFIRQPIVVAVGETGKTAATIEERVEFF 594          
BLAST of Gchil8331.t1 vs. uniprot
Match: A0A7S0T356_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T356_9RHOD)

HSP 1 Score: 150 bits (378), Expect = 3.570e-40
Identity = 76/166 (45.78%), Postives = 110/166 (66.27%), Query Frame = 0
Query:    1 MSATIASNGLYALVVAPTREHALQIVTEAKKCTYPMRYRVVASIGCKEKDVQAMSLQAVCDVVVCTPGRMVDVLDRQMTALKNCNYLILDEVDRMIDMGSEPQLAQVLECIPEEG--RQTFMYSATMSPAVDRMTRSYFKDPVVITMGETGKAADNSEKRIEFFSS 164
            + +T A+ G YALV+APTRE A QI  E+      +  RV++ +G  + + QA+SLQ  C+V++ TPGRM+D L+R    L  C+ L+LDE DRM+DMG EPQ+  VL  +PEE   R T M+SATMS  V+R+ ++Y  D V + +GE G++ DN  +R+EF +S
Sbjct:  133 LDSTAAARGPYALVLAPTRELAQQITQESSMFADALGIRVISLVGGADIEQQALSLQRGCEVIIATPGRMLDCLERHYIVLHQCSTLVLDEADRMLDMGFEPQVQAVLRMLPEEHEERHTMMFSATMSSGVERLAQAYLSDAVTVAVGEIGRSTDNVTQRVEFVAS 298          
BLAST of Gchil8331.t1 vs. uniprot
Match: A0A7S3UFC3_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UFC3_9CHLO)

HSP 1 Score: 149 bits (376), Expect = 5.260e-39
Identity = 79/170 (46.47%), Postives = 104/170 (61.18%), Query Frame = 0
Query:    1 MSATIASNGLYALVVAPTREHALQIVTEAKKCTYPMRYRVVASIGCKEKDVQAMSLQAVCDVVVCTPGRMVDVLDRQMTALKNCNYLILDEVDRMIDMGSEPQLAQVLECIPEEG----------------RQTFMYSATMSPAVDRMTRSYFKDPVVITMGETGKAADN 154
            M+  I + G YALV+APTRE ALQI  E KK  + + YRV A +G +  + Q   L+  C++V+ TPGRMVD LDR    L  CN+++LDE DRMIDMG EPQ+  VL+ +P                   R T M+SATM PAV+R+ R+Y + PV IT+G  G+ ADN
Sbjct:  299 MTPEIEAEGPYALVMAPTRELALQIEEETKKFAHFLGYRVTAVVGGQSIEEQGFKLRKGCEIVIATPGRMVDCLDRSYAVLNQCNFVVLDEADRMIDMGFEPQVNAVLDVMPSTNLKPENEDEPLEKNKTYRTTLMFSATMPPAVERIARTYLRHPVTITIGSAGRVADN 468          
BLAST of Gchil8331.t1 vs. uniprot
Match: M2Y012_GALSU (ATP-dependent RNA helicase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y012_GALSU)

HSP 1 Score: 145 bits (366), Expect = 2.230e-37
Identity = 75/182 (41.21%), Postives = 114/182 (62.64%), Query Frame = 0
Query:    1 MSATIASNGLYALVVAPTREHALQIVTEAKKCTYPMRYRVVASIGCKEKDVQAMSLQAVCDVVVCTPGRMVDVLDRQMTALKNCNYLILDEVDRMIDMGSEPQLAQVLECIP----------------EEG-----RQTFMYSATMSPAVDRMTRSYFKDPVVITMGETGKAADNSEKRIEF 161
            M+A  A+ G YA+++APTRE A QI  E +K   P+ YRV + +G    + Q M L+   ++V+ TPGRM+D L+R+   L  C+Y++LDE DRMIDMG EPQ+  VL+ +P                EE      RQTFM+SATM PAV+R+ R + ++P+++ +G+ GK A+  ++R+E+
Sbjct:  412 MTAANAAQGPYAVILAPTRELAQQIEEETRKFAEPLGYRVCSVVGGVSIEEQGMKLREGVEIVIATPGRMIDCLERRYCVLNQCDYVVLDEADRMIDMGFEPQVQGVLDAMPSSHLKPEVEELSEEFMEESSSILYRQTFMFSATMPPAVERLARKFLRNPIIVAVGDIGKGAELVQQRVEY 593          
BLAST of Gchil8331.t1 vs. uniprot
Match: D8UHU9_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UHU9_VOLCA)

HSP 1 Score: 142 bits (357), Expect = 1.400e-36
Identity = 71/169 (42.01%), Postives = 104/169 (61.54%), Query Frame = 0
Query:    7 SNGLYALVVAPTREHALQIVTEAKKCTYPMRYRVVASIGCKEKDVQAMSLQAVCDVVVCTPGRMVDVLDRQMTALKNCNYLILDEVDRMIDMGSEPQLAQVLECIP-------EEG---------RQTFMYSATMSPAVDRMTRSYFKDPVVITMGETGKAADNSEKRI 159
            ++G YA+V+APTRE A QI  E  K  Y   YR+ + +G +  + Q   L+  C++V+ TPGR++D +DR    L  CNY++LDE DRMID+G EPQ+  VL+ +P       E+G         R T+M+SATM PAV+R+ + Y + PVV+ +G  GK  DN  +R+
Sbjct:  229 ADGPYAVVLAPTRELAQQIEEETHKLAYYTNYRIASVVGGQSIEEQGAKLRKGCEIVIATPGRLLDCIDRHYAVLNQCNYVVLDEADRMIDLGFEPQVIGVLDAMPSSFLKPDEDGAVLEANRTYRTTYMFSATMPPAVERLAKKYLRRPVVVVIGSAGKVTDNVTQRV 397          
The following BLAST results are available for this feature:
BLAST of Gchil8331.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IP44_9FLOR1.590e-7475.61DEAD-box ATP-dependent RNA helicase 21 n=1 Tax=Gra... [more]
R7QF74_CHOCR2.940e-5256.21DEAD box RNA helicase, putative n=1 Tax=Chondrus c... [more]
A0A7S0BFF3_9RHOD3.050e-4646.70Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
UPI001E1DBD5D6.610e-4446.35DEAD-box ATP-dependent RNA helicase 21-like n=1 Ta... [more]
A0A7S3AAV5_9RHOD1.690e-4345.86Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S1XB50_9RHOD4.360e-4141.27Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0T356_9RHOD3.570e-4045.78Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S3UFC3_9CHLO5.260e-3946.47Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
M2Y012_GALSU2.230e-3741.21ATP-dependent RNA helicase n=1 Tax=Galdieria sulph... [more]
D8UHU9_VOLCA1.400e-3642.01Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1..162
e-value: 1.6E-10
score: 51.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..143
score: 19.191982
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 7..130
e-value: 1.2E-26
score: 93.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..153
e-value: 4.8E-42
score: 145.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..145
NoneNo IPR availablePANTHERPTHR47958:SF80SUBFAMILY NOT NAMEDcoord: 6..153
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 6..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004384_piloncontigtig00004384_pilon:2071535..2072029 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8331.t1Gchil8331.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004384_pilon 2071535..2072029 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8331.t1 ID=Gchil8331.t1|Name=Gchil8331.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=165bp
MSATIASNGLYALVVAPTREHALQIVTEAKKCTYPMRYRVVASIGCKEKD
VQAMSLQAVCDVVVCTPGRMVDVLDRQMTALKNCNYLILDEVDRMIDMGS
EPQLAQVLECIPEEGRQTFMYSATMSPAVDRMTRSYFKDPVVITMGETGK
AADNSEKRIEFFSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase