Gchil8196.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil8196.t1 vs. uniprot
Match: A0A2V3J0T4_9FLOR (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0T4_9FLOR) HSP 1 Score: 218 bits (556), Expect = 2.600e-71 Identity = 115/134 (85.82%), Postives = 121/134 (90.30%), Query Frame = 0
Query: 1 MSVGIPIKLLHEASPHIVTIEMRTGDVYRGTLSSVEDNMNVQLKRVTFTRVDGKVSTLEHIFIRGSKIRFFVLPDILASAPMFKRVEALKDGRPMEARGLGRGRGAGGVASRAPVMAAGRGRGFPRAPPPRGGR 134
MSVGIPIKLLHEASPHIVTIEMR GDVYRGTL+SVEDNMNVQLKRVT TR DGKVSTLEH+FIRGSKIRFF+LPDILA+APMFKRVEALK+GRPMEARGLGRGRG G V+ R P AGRGRGFPR PPR GR
Sbjct: 1 MSVGIPIKLLHEASPHIVTIEMRMGDVYRGTLTSVEDNMNVQLKRVTLTRRDGKVSTLEHVFIRGSKIRFFILPDILANAPMFKRVEALKEGRPMEARGLGRGRGLGAVSGR-PNPPAGRGRGFPRGAPPRAGR 133
BLAST of Gchil8196.t1 vs. uniprot
Match: R7QQT6_CHOCR (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQT6_CHOCR) HSP 1 Score: 157 bits (397), Expect = 3.030e-47 Identity = 82/110 (74.55%), Postives = 90/110 (81.82%), Query Frame = 0
Query: 1 MSVGIPIKLLHEASPHIVTIEMRTGDVYRGTLSSVEDNMNVQLKRVTFTRVDGKVSTLEHIFIRGSKIRFFVLPDILASAPMFKRVEALKDGRPMEARGLGRGRGAGGVA 110
MSVGIPIKLLHEASPH+VT+E+ GDVYRGTLSSVEDNMNVQL+RVT T DGKVS LE++FIRGSKIR+F+LPDILASAPMFKR ARGLGRGRG G A
Sbjct: 1 MSVGIPIKLLHEASPHVVTVELHVGDVYRGTLSSVEDNMNVQLRRVTLTARDGKVSNLENVFIRGSKIRYFILPDILASAPMFKR-----------ARGLGRGRGMPGAA 99
BLAST of Gchil8196.t1 vs. uniprot
Match: A0A7S0T8S9_9RHOD (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T8S9_9RHOD) HSP 1 Score: 154 bits (389), Expect = 7.970e-46 Identity = 76/110 (69.09%), Postives = 90/110 (81.82%), Query Frame = 0
Query: 1 MSVGIPIKLLHEASPHIVTIEMRTGDVYRGTLSSVEDNMNVQLKRVTFTRVDGKVSTLEHIFIRGSKIRFFVLPDILASAPMFKRVEALKDGRPMEARGLGRGRGAGGVA 110
MS+GIPIKLLHEA H+VT+E R GDVYRGTLSS EDNMNVQL++V TR DGKV L+++FIRGSKIRF +LPD+LA+APMFKR+EALK+GR A +G GRG VA
Sbjct: 16 MSIGIPIKLLHEAEAHVVTVETRDGDVYRGTLSSAEDNMNVQLRKVHLTRRDGKVIPLDYVFIRGSKIRFLILPDMLANAPMFKRLEALKEGRSSSAAAVGAGRGRASVA 125
BLAST of Gchil8196.t1 vs. uniprot
Match: B9H5H6_POPTR (Small nuclear ribonucleoprotein Sm D3 n=13 Tax=Mesangiospermae TaxID=1437183 RepID=B9H5H6_POPTR) HSP 1 Score: 136 bits (342), Expect = 9.500e-39 Identity = 74/131 (56.49%), Postives = 96/131 (73.28%), Query Frame = 0
Query: 2 SVGIPIKLLHEASPHIVTIEMRTGDVYRGTLSSVEDNMNVQLKRVTFTRVDGKVSTLEHIFIRGSKIRFFVLPDILASAPMFKRVEALKDGRPMEARGLGRGRGAGGVASRAPVMAAGRGRGFPRAPPPRG 132
S+GIP+KLLHEAS HIVT+E+++G++YRG + EDN N QL+ +T+T DGKVS LEH+FIRGSK+RF V+PD+L +APMFKR++A G+ G+GRGR VA R+ AAGRG APP RG
Sbjct: 4 SLGIPVKLLHEASGHIVTVELKSGELYRGGMVECEDNWNCQLESITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSASL-GVGRGRS---VAMRSKAQAAGRG-----APPGRG 125
BLAST of Gchil8196.t1 vs. uniprot
Match: A0A5J4YP68_PORPP (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YP68_PORPP) HSP 1 Score: 134 bits (336), Expect = 6.460e-38 Identity = 61/91 (67.03%), Postives = 78/91 (85.71%), Query Frame = 0
Query: 1 MSVGIPIKLLHEASPHIVTIEMRTGDVYRGTLSSVEDNMNVQLKRVTFTRVDGKVSTLEHIFIRGSKIRFFVLPDILASAPMFKRVEALKD 91
MS+G+PIKLLHEA H+VT+E R+G+VYRGT+ + EDNMNVQL++V TR DGKV L+ +FIRGSK+RF +LPDILA AP+FKR+EALK+
Sbjct: 1 MSIGVPIKLLHEAEAHVVTVETRSGEVYRGTVLAAEDNMNVQLRKVHMTRRDGKVVPLDQVFIRGSKVRFIILPDILAHAPIFKRLEALKN 91
BLAST of Gchil8196.t1 vs. uniprot
Match: SMD3B_ARATH (Small nuclear ribonucleoprotein SmD3b n=25 Tax=rosids TaxID=71275 RepID=SMD3B_ARATH) HSP 1 Score: 134 bits (336), Expect = 7.520e-38 Identity = 72/129 (55.81%), Postives = 93/129 (72.09%), Query Frame = 0
Query: 2 SVGIPIKLLHEASPHIVTIEMRTGDVYRGTLSSVEDNMNVQLKRVTFTRVDGKVSTLEHIFIRGSKIRFFVLPDILASAPMFKRVEALKDGRPMEARGLGRGRGAGGVASRAPVMAAGRGRGFPRAPPP 130
S+GIP+KLLHEAS HIVT+E+++G++YRG++ EDN N QL+ +T+T DGKVS LEH+FIRGSK+RF V+PDIL APMFKR++A G+ + G+GRGRGA P GRG G A PP
Sbjct: 4 SLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDGKVSQLEHVFIRGSKVRFMVIPDILKHAPMFKRLDARIKGKS-SSLGVGRGRGA---MRGKPAAGPGRGTGGRGAVPP 128
BLAST of Gchil8196.t1 vs. uniprot
Match: B9GQ12_POPTR (Small nuclear ribonucleoprotein Sm D3 n=30 Tax=Magnoliopsida TaxID=3398 RepID=B9GQ12_POPTR) HSP 1 Score: 134 bits (336), Expect = 7.750e-38 Identity = 68/120 (56.67%), Postives = 91/120 (75.83%), Query Frame = 0
Query: 2 SVGIPIKLLHEASPHIVTIEMRTGDVYRGTLSSVEDNMNVQLKRVTFTRVDGKVSTLEHIFIRGSKIRFFVLPDILASAPMFKRVEALKDGRPMEARGLGRGRGAGGVASRAPVMAAGRG 121
S+GIP+KLLHEAS HIVT+E+++G++YRG++ EDN N QL+ +T+T DGKVS LEH+FIRGSK+RF V+PD+L +APMFKR++A G+ G+GRGR VA R+ A GRG
Sbjct: 4 SLGIPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSASL-GVGRGRS---VAMRSKAQATGRG 119
BLAST of Gchil8196.t1 vs. uniprot
Match: A0A5B6VDH6_9ROSI (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Gossypium australe TaxID=47621 RepID=A0A5B6VDH6_9ROSI) HSP 1 Score: 134 bits (337), Expect = 9.380e-38 Identity = 72/124 (58.06%), Postives = 94/124 (75.81%), Query Frame = 0
Query: 2 SVGIPIKLLHEASPHIVTIEMRTGDVYRGTLSSVEDNMNVQLKRVTFTRVDGKVSTLEHIFIRGSKIRFFVLPDILASAPMFKRVEALKDGRPMEARGLGRGRGAGGVASRAPV----MAAGRG 121
S+GIP+KLLHEAS HIVT+E+++G++YRG++ EDN N QL+ +TFT DGKVS LEH+FIRGSK+RF V+PD+L +APMFKR++A G+ + G+GRGR VA RA V AAGRG
Sbjct: 4 SLGIPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLENITFTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDAKIKGKS-SSLGVGRGRA---VAMRAKVSSSAQAAGRG 123
BLAST of Gchil8196.t1 vs. uniprot
Match: A0A5J5B4C7_9ASTE (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5B4C7_9ASTE) HSP 1 Score: 133 bits (334), Expect = 3.010e-37 Identity = 68/114 (59.65%), Postives = 89/114 (78.07%), Query Frame = 0
Query: 2 SVGIPIKLLHEASPHIVTIEMRTGDVYRGTLSSVEDNMNVQLKRVTFTRVDGKVSTLEHIFIRGSKIRFFVLPDILASAPMFKRVEALKDGRPMEARGLGRGRGAGGVASRAPV 115
S+GIP+KLLHEAS HIVT+E+++G++YRG++ EDN N QL+ +TFT DGKVS LEH+FIRGSK+RF V+PD+L +APMFKR++A G+ A G+GRGR VA RA V
Sbjct: 4 SLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKG-SALGVGRGRA---VAMRARV 113
BLAST of Gchil8196.t1 vs. uniprot
Match: A0A0K9RF91_SPIOL (Small nuclear ribonucleoprotein Sm D3 n=7 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9RF91_SPIOL) HSP 1 Score: 131 bits (330), Expect = 6.130e-37 Identity = 67/129 (51.94%), Postives = 92/129 (71.32%), Query Frame = 0
Query: 2 SVGIPIKLLHEASPHIVTIEMRTGDVYRGTLSSVEDNMNVQLKRVTFTRVDGKVSTLEHIFIRGSKIRFFVLPDILASAPMFKRVEALKDGRPMEARGLGRGRGAGGVASRAPVMAAGRGRGFPRAPPP 130
S+GIP+KL+HEA+ H+V++E+++G++YRGT+ EDN N QL +TFT DGKVS LEH+FIRGS++RF ++PD+L +APMFKR++A G+ G+GRGR VA RA GRG G PP
Sbjct: 4 SLGIPVKLMHEATGHVVSVELKSGELYRGTMIECEDNWNCQLDNITFTAKDGKVSQLEHVFIRGSRVRFMIIPDMLKNAPMFKRLDARIKGKSTSL-GVGRGRA---VAMRAKAQTGGRGTGGRGVVPP 128 The following BLAST results are available for this feature:
BLAST of Gchil8196.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil8196.t1 ID=Gchil8196.t1|Name=Gchil8196.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=135bpback to top |